Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00662 and H281DRAFT_00663 are separated by 643 nucleotides H281DRAFT_00663 and H281DRAFT_00664 overlap by 4 nucleotides H281DRAFT_00664 and H281DRAFT_00665 are separated by 13 nucleotides
H281DRAFT_00662: H281DRAFT_00662 - Short-chain dehydrogenase, at 741,334 to 742,167
_00662
H281DRAFT_00663: H281DRAFT_00663 - assimilatory nitrite reductase (NAD(P)H) small subunit (EC 1.7.1.4), at 742,811 to 743,158
_00663
H281DRAFT_00664: H281DRAFT_00664 - assimilatory nitrate reductase (NADH) beta subunit (EC 1.7.1.1), at 743,155 to 744,426
_00664
H281DRAFT_00665: H281DRAFT_00665 - assimilatory nitrate reductase (NADH) alpha subunit apoprotein (EC 1.7.1.1), at 744,440 to 747,280
_00665
Position (kb)
743
744
745 Strain fitness (log2 ratio)
-1
0
1 at 742.206 kb on - strand at 742.669 kb on + strand at 742.786 kb on + strand at 742.786 kb on + strand at 742.787 kb on - strand at 742.787 kb on - strand at 742.787 kb on - strand at 742.791 kb on - strand at 742.791 kb on - strand at 742.877 kb on - strand, within H281DRAFT_00663 at 742.911 kb on + strand, within H281DRAFT_00663 at 742.918 kb on - strand, within H281DRAFT_00663 at 743.192 kb on + strand at 744.022 kb on + strand, within H281DRAFT_00664 at 744.022 kb on + strand, within H281DRAFT_00664 at 744.262 kb on - strand, within H281DRAFT_00664 at 744.458 kb on - strand at 744.822 kb on - strand, within H281DRAFT_00665 at 744.950 kb on + strand, within H281DRAFT_00665 at 745.195 kb on - strand, within H281DRAFT_00665 at 745.267 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 742,206 - -0.5 742,669 + +1.2 742,786 + +1.4 742,786 + +0.3 742,787 - -1.5 742,787 - +0.1 742,787 - +1.0 742,791 - -0.4 742,791 - +0.7 742,877 - H281DRAFT_00663 0.19 +0.5 742,911 + H281DRAFT_00663 0.29 +1.5 742,918 - H281DRAFT_00663 0.31 +0.1 743,192 + +0.7 744,022 + H281DRAFT_00664 0.68 -0.1 744,022 + H281DRAFT_00664 0.68 -0.6 744,262 - H281DRAFT_00664 0.87 -1.7 744,458 - -1.2 744,822 - H281DRAFT_00665 0.13 -0.3 744,950 + H281DRAFT_00665 0.18 +0.5 745,195 - H281DRAFT_00665 0.27 +0.7 745,267 - +0.8
Or see this region's nucleotide sequence