Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00505 and H281DRAFT_00506 are separated by 47 nucleotides H281DRAFT_00506 and H281DRAFT_00507 are separated by 6 nucleotides H281DRAFT_00507 and H281DRAFT_00508 are separated by 17 nucleotides H281DRAFT_00508 and H281DRAFT_00509 are separated by 43 nucleotides
H281DRAFT_00505: H281DRAFT_00505 - tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family, at 566,455 to 567,090
_00505
H281DRAFT_00506: H281DRAFT_00506 - Zn-dependent protease (includes SpoIVFB), at 567,138 to 567,800
_00506
H281DRAFT_00507: H281DRAFT_00507 - tryptophanyl-tRNA synthetase, at 567,807 to 569,009
_00507
H281DRAFT_00508: H281DRAFT_00508 - Methyltransferase domain-containing protein, at 569,027 to 569,623
_00508
H281DRAFT_00509: H281DRAFT_00509 - dihydrodipicolinate synthase, at 569,667 to 570,593
_00509
Position (kb) 567
568
569
570 Strain fitness (log2 ratio) -2
-1
0
1
2 at 566.891 kb on + strand, within H281DRAFT_00505 at 567.124 kb on + strand at 567.125 kb on - strand at 567.125 kb on - strand at 567.137 kb on + strand at 567.154 kb on + strand at 567.255 kb on + strand, within H281DRAFT_00506 at 567.366 kb on + strand, within H281DRAFT_00506 at 567.755 kb on + strand at 567.755 kb on + strand at 569.002 kb on - strand at 569.002 kb on - strand at 569.314 kb on + strand, within H281DRAFT_00508 at 569.318 kb on + strand, within H281DRAFT_00508 at 569.318 kb on + strand, within H281DRAFT_00508 at 569.318 kb on + strand, within H281DRAFT_00508 at 569.319 kb on - strand, within H281DRAFT_00508 at 569.319 kb on - strand, within H281DRAFT_00508 at 569.381 kb on + strand, within H281DRAFT_00508 at 569.425 kb on + strand, within H281DRAFT_00508 at 569.426 kb on - strand, within H281DRAFT_00508 at 569.607 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 566,891 + H281DRAFT_00505 0.69 -0.4 567,124 + -0.5 567,125 - -0.7 567,125 - +2.3 567,137 + -0.5 567,154 + +0.1 567,255 + H281DRAFT_00506 0.18 +0.3 567,366 + H281DRAFT_00506 0.34 -0.9 567,755 + +2.0 567,755 + +0.8 569,002 - -1.7 569,002 - -0.3 569,314 + H281DRAFT_00508 0.48 +0.7 569,318 + H281DRAFT_00508 0.49 -0.4 569,318 + H281DRAFT_00508 0.49 -0.0 569,318 + H281DRAFT_00508 0.49 -0.5 569,319 - H281DRAFT_00508 0.49 +0.8 569,319 - H281DRAFT_00508 0.49 -2.6 569,381 + H281DRAFT_00508 0.59 +1.3 569,425 + H281DRAFT_00508 0.67 -1.1 569,426 - H281DRAFT_00508 0.67 +0.6 569,607 - +0.1
Or see this region's nucleotide sequence