Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00445 and H281DRAFT_00446 are separated by 269 nucleotides H281DRAFT_00446 and H281DRAFT_00447 are separated by 574 nucleotides
H281DRAFT_00445: H281DRAFT_00445 - ATP-dependent helicase HrpA, at 488,943 to 493,397
_00445
H281DRAFT_00446: H281DRAFT_00446 - Autotransporter adhesin, at 493,667 to 496,537
_00446
H281DRAFT_00447: H281DRAFT_00447 - 40-residue YVTN family beta-propeller repeat-containing protein, at 497,112 to 498,131
_00447
Position (kb) 493
494
495
496
497 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 492.760 kb on - strand, within H281DRAFT_00445 at 493.003 kb on + strand at 493.230 kb on + strand at 493.230 kb on + strand at 493.230 kb on + strand at 493.231 kb on - strand at 493.231 kb on - strand at 493.369 kb on - strand at 493.369 kb on - strand at 493.369 kb on - strand at 493.412 kb on + strand at 493.669 kb on - strand at 493.679 kb on - strand at 493.738 kb on - strand at 493.868 kb on + strand at 493.868 kb on + strand at 493.929 kb on + strand at 493.929 kb on + strand at 493.930 kb on - strand at 494.269 kb on + strand, within H281DRAFT_00446 at 494.475 kb on + strand, within H281DRAFT_00446 at 494.812 kb on + strand, within H281DRAFT_00446 at 495.008 kb on + strand, within H281DRAFT_00446 at 495.008 kb on + strand, within H281DRAFT_00446 at 495.253 kb on - strand, within H281DRAFT_00446 at 495.286 kb on + strand, within H281DRAFT_00446 at 495.287 kb on - strand, within H281DRAFT_00446 at 495.459 kb on + strand, within H281DRAFT_00446 at 495.459 kb on + strand, within H281DRAFT_00446 at 495.575 kb on + strand, within H281DRAFT_00446 at 495.630 kb on - strand, within H281DRAFT_00446 at 495.630 kb on - strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.633 kb on + strand, within H281DRAFT_00446 at 495.634 kb on - strand, within H281DRAFT_00446 at 495.634 kb on - strand, within H281DRAFT_00446 at 495.791 kb on - strand, within H281DRAFT_00446 at 495.791 kb on - strand, within H281DRAFT_00446 at 495.817 kb on + strand, within H281DRAFT_00446 at 496.322 kb on - strand at 496.668 kb on + strand at 496.861 kb on + strand at 496.862 kb on - strand at 496.862 kb on - strand at 496.884 kb on - strand at 496.930 kb on + strand at 497.079 kb on + strand at 497.079 kb on + strand at 497.079 kb on + strand at 497.080 kb on - strand at 497.080 kb on - strand at 497.080 kb on - strand at 497.276 kb on - strand, within H281DRAFT_00447 at 497.288 kb on - strand, within H281DRAFT_00447 at 497.423 kb on - strand, within H281DRAFT_00447 at 497.471 kb on + strand, within H281DRAFT_00447 at 497.501 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.505 kb on + strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.506 kb on - strand, within H281DRAFT_00447 at 497.511 kb on + strand, within H281DRAFT_00447 at 497.511 kb on + strand, within H281DRAFT_00447 at 497.512 kb on - strand, within H281DRAFT_00447 at 497.512 kb on - strand, within H281DRAFT_00447
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 492,760 - H281DRAFT_00445 0.86 -0.6 493,003 + -0.5 493,230 + -0.7 493,230 + -1.6 493,230 + -0.1 493,231 - -0.7 493,231 - -3.5 493,369 - -1.2 493,369 - +0.0 493,369 - -0.7 493,412 + +0.6 493,669 - -0.8 493,679 - +0.0 493,738 - -0.5 493,868 + +0.3 493,868 + -0.7 493,929 + +0.4 493,929 + +0.9 493,930 - -1.3 494,269 + H281DRAFT_00446 0.21 -1.3 494,475 + H281DRAFT_00446 0.28 -0.1 494,812 + H281DRAFT_00446 0.40 +0.1 495,008 + H281DRAFT_00446 0.47 -1.4 495,008 + H281DRAFT_00446 0.47 -0.3 495,253 - H281DRAFT_00446 0.55 +0.1 495,286 + H281DRAFT_00446 0.56 -1.0 495,287 - H281DRAFT_00446 0.56 +0.5 495,459 + H281DRAFT_00446 0.62 +0.9 495,459 + H281DRAFT_00446 0.62 -0.6 495,575 + H281DRAFT_00446 0.66 -0.1 495,630 - H281DRAFT_00446 0.68 +0.1 495,630 - H281DRAFT_00446 0.68 -0.1 495,633 + H281DRAFT_00446 0.68 -0.1 495,633 + H281DRAFT_00446 0.68 -0.1 495,633 + H281DRAFT_00446 0.68 -0.6 495,633 + H281DRAFT_00446 0.68 +0.2 495,634 - H281DRAFT_00446 0.69 -0.0 495,634 - H281DRAFT_00446 0.69 -1.4 495,791 - H281DRAFT_00446 0.74 +0.7 495,791 - H281DRAFT_00446 0.74 -0.8 495,817 + H281DRAFT_00446 0.75 -1.8 496,322 - +0.2 496,668 + +0.4 496,861 + +0.4 496,862 - +0.6 496,862 - +0.5 496,884 - +0.1 496,930 + -0.4 497,079 + -0.2 497,079 + +0.7 497,079 + +0.3 497,080 - -0.0 497,080 - +0.4 497,080 - +0.3 497,276 - H281DRAFT_00447 0.16 -0.3 497,288 - H281DRAFT_00447 0.17 -0.4 497,423 - H281DRAFT_00447 0.30 -0.9 497,471 + H281DRAFT_00447 0.35 -0.5 497,501 + H281DRAFT_00447 0.38 -1.0 497,505 + H281DRAFT_00447 0.39 -0.4 497,505 + H281DRAFT_00447 0.39 +1.1 497,505 + H281DRAFT_00447 0.39 -1.9 497,505 + H281DRAFT_00447 0.39 -2.0 497,505 + H281DRAFT_00447 0.39 -0.8 497,505 + H281DRAFT_00447 0.39 -0.6 497,506 - H281DRAFT_00447 0.39 -1.1 497,506 - H281DRAFT_00447 0.39 -1.9 497,506 - H281DRAFT_00447 0.39 -0.4 497,506 - H281DRAFT_00447 0.39 -1.7 497,506 - H281DRAFT_00447 0.39 -1.9 497,506 - H281DRAFT_00447 0.39 -1.1 497,511 + H281DRAFT_00447 0.39 -0.4 497,511 + H281DRAFT_00447 0.39 -0.5 497,512 - H281DRAFT_00447 0.39 -0.7 497,512 - H281DRAFT_00447 0.39 -0.2
Or see this region's nucleotide sequence