Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00379 and H281DRAFT_00380 are separated by 126 nucleotides H281DRAFT_00380 and H281DRAFT_00381 are separated by 52 nucleotides
H281DRAFT_00379: H281DRAFT_00379 - dihydroorotate oxidase B, catalytic subunit /dihydrouracil dehydrogenase (NAD+) /dihydropyrimidine dehydrogenase (NADP+), at 417,964 to 419,292
_00379
H281DRAFT_00380: H281DRAFT_00380 - nucleobase:cation symporter-1, NCS1 family, at 419,419 to 420,930
_00380
H281DRAFT_00381: H281DRAFT_00381 - dihydropyrimidinase, at 420,983 to 422,434
_00381
Position (kb) 419
420
421 Strain fitness (log2 ratio) -1
0
1
2 at 418.964 kb on - strand, within H281DRAFT_00379 at 419.241 kb on - strand at 419.325 kb on + strand at 419.326 kb on - strand at 419.404 kb on - strand at 419.534 kb on - strand at 419.534 kb on - strand at 419.613 kb on + strand, within H281DRAFT_00380 at 419.614 kb on - strand, within H281DRAFT_00380 at 419.648 kb on + strand, within H281DRAFT_00380 at 419.837 kb on - strand, within H281DRAFT_00380 at 419.951 kb on - strand, within H281DRAFT_00380 at 419.951 kb on - strand, within H281DRAFT_00380 at 419.968 kb on - strand, within H281DRAFT_00380 at 420.452 kb on - strand, within H281DRAFT_00380 at 420.565 kb on + strand, within H281DRAFT_00380 at 420.566 kb on - strand, within H281DRAFT_00380 at 420.567 kb on + strand, within H281DRAFT_00380 at 420.568 kb on - strand, within H281DRAFT_00380 at 420.624 kb on - strand, within H281DRAFT_00380 at 420.635 kb on - strand, within H281DRAFT_00380 at 420.694 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.696 kb on + strand, within H281DRAFT_00380 at 420.697 kb on - strand at 420.702 kb on + strand, within H281DRAFT_00380 at 420.822 kb on + strand at 420.829 kb on + strand at 420.835 kb on + strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.836 kb on - strand at 420.968 kb on + strand at 421.178 kb on - strand, within H281DRAFT_00381 at 421.221 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.395 kb on - strand, within H281DRAFT_00381 at 421.817 kb on + strand, within H281DRAFT_00381
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 418,964 - H281DRAFT_00379 0.75 +0.7 419,241 - +0.4 419,325 + -0.1 419,326 - +1.6 419,404 - +0.4 419,534 - -0.1 419,534 - -0.9 419,613 + H281DRAFT_00380 0.13 -0.3 419,614 - H281DRAFT_00380 0.13 -0.3 419,648 + H281DRAFT_00380 0.15 -1.5 419,837 - H281DRAFT_00380 0.28 +0.9 419,951 - H281DRAFT_00380 0.35 -0.5 419,951 - H281DRAFT_00380 0.35 +0.4 419,968 - H281DRAFT_00380 0.36 +0.1 420,452 - H281DRAFT_00380 0.68 +1.3 420,565 + H281DRAFT_00380 0.76 -0.8 420,566 - H281DRAFT_00380 0.76 -0.3 420,567 + H281DRAFT_00380 0.76 -0.5 420,568 - H281DRAFT_00380 0.76 -0.1 420,624 - H281DRAFT_00380 0.80 +0.5 420,635 - H281DRAFT_00380 0.80 +0.3 420,694 + H281DRAFT_00380 0.84 -0.0 420,696 + H281DRAFT_00380 0.84 +0.3 420,696 + H281DRAFT_00380 0.84 +0.6 420,696 + H281DRAFT_00380 0.84 -1.6 420,696 + H281DRAFT_00380 0.84 -0.5 420,697 - -0.1 420,702 + H281DRAFT_00380 0.85 +0.2 420,822 + -0.1 420,829 + +2.2 420,835 + -0.4 420,836 - -1.0 420,836 - +0.4 420,836 - -0.1 420,836 - -1.0 420,968 + +0.5 421,178 - H281DRAFT_00381 0.13 +0.5 421,221 - H281DRAFT_00381 0.16 +0.6 421,395 - H281DRAFT_00381 0.28 +0.3 421,395 - H281DRAFT_00381 0.28 -0.4 421,817 + H281DRAFT_00381 0.57 +0.3
Or see this region's nucleotide sequence