Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00218 and H281DRAFT_00219 are separated by 148 nucleotides H281DRAFT_00219 and H281DRAFT_00220 are separated by 231 nucleotides H281DRAFT_00220 and H281DRAFT_00221 are separated by 617 nucleotides
H281DRAFT_00218: H281DRAFT_00218 - NAD+ synthase (glutamine-hydrolysing), at 236,890 to 238,635
_00218
H281DRAFT_00219: H281DRAFT_00219 - nitrogen regulatory protein P-II family, at 238,784 to 239,122
_00219
H281DRAFT_00220: H281DRAFT_00220 - Outer membrane protein (porin), at 239,354 to 240,475
_00220
H281DRAFT_00221: H281DRAFT_00221 - amino acid ABC transporter ATP-binding protein, PAAT family, at 241,093 to 241,872
_00221
Position (kb) 239
240
241 Strain fitness (log2 ratio) -2
-1
0
1
2 at 238.406 kb on - strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.435 kb on + strand, within H281DRAFT_00218 at 238.436 kb on - strand, within H281DRAFT_00218 at 238.436 kb on - strand, within H281DRAFT_00218 at 238.531 kb on + strand at 238.532 kb on - strand at 238.533 kb on + strand at 238.728 kb on - strand at 238.919 kb on + strand, within H281DRAFT_00219 at 238.919 kb on + strand, within H281DRAFT_00219 at 238.934 kb on + strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 238.935 kb on - strand, within H281DRAFT_00219 at 239.121 kb on - strand at 239.245 kb on + strand at 239.422 kb on - strand at 239.425 kb on + strand at 239.553 kb on + strand, within H281DRAFT_00220 at 239.572 kb on - strand, within H281DRAFT_00220 at 239.613 kb on + strand, within H281DRAFT_00220 at 239.613 kb on + strand, within H281DRAFT_00220 at 239.614 kb on - strand, within H281DRAFT_00220 at 239.722 kb on + strand, within H281DRAFT_00220 at 239.736 kb on + strand, within H281DRAFT_00220 at 239.850 kb on + strand, within H281DRAFT_00220 at 239.855 kb on - strand, within H281DRAFT_00220 at 239.883 kb on + strand, within H281DRAFT_00220 at 239.884 kb on - strand, within H281DRAFT_00220 at 239.884 kb on - strand, within H281DRAFT_00220 at 239.971 kb on - strand, within H281DRAFT_00220 at 240.004 kb on - strand, within H281DRAFT_00220 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.137 kb on - strand, within H281DRAFT_00220 at 240.145 kb on + strand, within H281DRAFT_00220 at 240.369 kb on - strand at 240.369 kb on - strand at 240.373 kb on - strand at 240.399 kb on + strand at 240.399 kb on + strand at 240.399 kb on + strand at 240.400 kb on - strand at 240.512 kb on + strand at 240.581 kb on + strand at 240.581 kb on + strand at 240.711 kb on - strand at 240.724 kb on + strand at 240.886 kb on + strand at 240.912 kb on - strand at 240.912 kb on - strand at 240.942 kb on - strand at 241.007 kb on + strand at 241.086 kb on - strand at 241.086 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 238,406 - H281DRAFT_00218 0.87 +1.3 238,435 + H281DRAFT_00218 0.88 -0.0 238,435 + H281DRAFT_00218 0.88 +0.3 238,435 + H281DRAFT_00218 0.88 -1.0 238,436 - H281DRAFT_00218 0.89 -2.3 238,436 - H281DRAFT_00218 0.89 -2.4 238,531 + +1.0 238,532 - +0.3 238,533 + -0.2 238,728 - -0.5 238,919 + H281DRAFT_00219 0.40 -1.7 238,919 + H281DRAFT_00219 0.40 -0.3 238,934 + H281DRAFT_00219 0.44 -0.6 238,935 - H281DRAFT_00219 0.45 -0.3 238,935 - H281DRAFT_00219 0.45 -0.2 238,935 - H281DRAFT_00219 0.45 -0.1 239,121 - +0.0 239,245 + -2.6 239,422 - -0.8 239,425 + +0.1 239,553 + H281DRAFT_00220 0.18 -0.6 239,572 - H281DRAFT_00220 0.19 +0.5 239,613 + H281DRAFT_00220 0.23 -0.1 239,613 + H281DRAFT_00220 0.23 +0.1 239,614 - H281DRAFT_00220 0.23 -0.1 239,722 + H281DRAFT_00220 0.33 +2.2 239,736 + H281DRAFT_00220 0.34 -0.6 239,850 + H281DRAFT_00220 0.44 +1.1 239,855 - H281DRAFT_00220 0.45 +0.4 239,883 + H281DRAFT_00220 0.47 +0.6 239,884 - H281DRAFT_00220 0.47 +0.9 239,884 - H281DRAFT_00220 0.47 +1.2 239,971 - H281DRAFT_00220 0.55 +0.0 240,004 - H281DRAFT_00220 0.58 -2.6 240,136 + H281DRAFT_00220 0.70 +0.0 240,136 + H281DRAFT_00220 0.70 +0.5 240,136 + H281DRAFT_00220 0.70 -0.3 240,137 - H281DRAFT_00220 0.70 -0.3 240,145 + H281DRAFT_00220 0.70 -0.6 240,369 - -0.4 240,369 - +0.8 240,373 - +0.4 240,399 + +0.3 240,399 + +0.5 240,399 + -2.2 240,400 - -0.7 240,512 + +0.6 240,581 + +0.7 240,581 + +0.9 240,711 - +0.7 240,724 + +0.7 240,886 + -1.9 240,912 - -0.0 240,912 - +0.2 240,942 - +0.8 241,007 + -0.1 241,086 - +0.4 241,086 - -2.5
Or see this region's nucleotide sequence