Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00040 and H281DRAFT_00041 overlap by 1 nucleotides H281DRAFT_00041 and H281DRAFT_00042 overlap by 14 nucleotides H281DRAFT_00042 and H281DRAFT_00043 are separated by 147 nucleotides
H281DRAFT_00040: H281DRAFT_00040 - AraC-type DNA-binding protein, at 44,868 to 45,848
_00040
H281DRAFT_00041: H281DRAFT_00041 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 45,848 to 46,585
_00041
H281DRAFT_00042: H281DRAFT_00042 - hypothetical protein, at 46,572 to 46,778
_00042
H281DRAFT_00043: H281DRAFT_00043 - protein of unknown function (DUF3331), at 46,926 to 47,339
_00043
Position (kb) 45
46
47 Strain fitness (log2 ratio) -2
-1
0
1 at 44.922 kb on + strand at 44.923 kb on - strand at 44.927 kb on - strand at 45.039 kb on - strand, within H281DRAFT_00040 at 45.114 kb on + strand, within H281DRAFT_00040 at 45.243 kb on + strand, within H281DRAFT_00040 at 45.246 kb on - strand, within H281DRAFT_00040 at 45.378 kb on - strand, within H281DRAFT_00040 at 45.423 kb on - strand, within H281DRAFT_00040 at 45.555 kb on - strand, within H281DRAFT_00040 at 45.577 kb on - strand, within H281DRAFT_00040 at 45.663 kb on + strand, within H281DRAFT_00040 at 45.664 kb on - strand, within H281DRAFT_00040 at 45.668 kb on + strand, within H281DRAFT_00040 at 45.668 kb on + strand, within H281DRAFT_00040 at 45.694 kb on - strand, within H281DRAFT_00040 at 45.694 kb on - strand, within H281DRAFT_00040 at 45.778 kb on + strand at 46.172 kb on - strand, within H281DRAFT_00041 at 46.406 kb on + strand, within H281DRAFT_00041 at 46.407 kb on - strand, within H281DRAFT_00041 at 46.513 kb on + strand at 46.602 kb on - strand, within H281DRAFT_00042 at 46.776 kb on + strand at 46.777 kb on - strand at 46.777 kb on - strand at 46.811 kb on + strand at 46.881 kb on + strand at 46.904 kb on + strand at 46.905 kb on - strand at 46.945 kb on - strand at 46.945 kb on - strand at 47.047 kb on + strand, within H281DRAFT_00043 at 47.048 kb on - strand, within H281DRAFT_00043 at 47.121 kb on + strand, within H281DRAFT_00043 at 47.164 kb on - strand, within H281DRAFT_00043 at 47.466 kb on - strand at 47.466 kb on - strand at 47.481 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 44,922 + +1.4 44,923 - +0.6 44,927 - -0.1 45,039 - H281DRAFT_00040 0.17 +0.5 45,114 + H281DRAFT_00040 0.25 -0.4 45,243 + H281DRAFT_00040 0.38 -0.5 45,246 - H281DRAFT_00040 0.39 +0.5 45,378 - H281DRAFT_00040 0.52 -0.3 45,423 - H281DRAFT_00040 0.57 +0.1 45,555 - H281DRAFT_00040 0.70 -2.3 45,577 - H281DRAFT_00040 0.72 +1.2 45,663 + H281DRAFT_00040 0.81 -0.7 45,664 - H281DRAFT_00040 0.81 -0.6 45,668 + H281DRAFT_00040 0.82 +0.5 45,668 + H281DRAFT_00040 0.82 -2.5 45,694 - H281DRAFT_00040 0.84 -0.0 45,694 - H281DRAFT_00040 0.84 +0.4 45,778 + -1.3 46,172 - H281DRAFT_00041 0.44 +1.0 46,406 + H281DRAFT_00041 0.76 -1.4 46,407 - H281DRAFT_00041 0.76 +0.8 46,513 + -0.0 46,602 - H281DRAFT_00042 0.14 -0.7 46,776 + +0.1 46,777 - +0.9 46,777 - +0.1 46,811 + -1.9 46,881 + -1.3 46,904 + -0.2 46,905 - +0.1 46,945 - -0.0 46,945 - +0.3 47,047 + H281DRAFT_00043 0.29 +0.6 47,048 - H281DRAFT_00043 0.29 +0.6 47,121 + H281DRAFT_00043 0.47 +0.5 47,164 - H281DRAFT_00043 0.57 +1.0 47,466 - +0.3 47,466 - -0.6 47,481 + +0.3
Or see this region's nucleotide sequence