Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00004 and H281DRAFT_00005 are separated by 155 nucleotides H281DRAFT_00005 and H281DRAFT_00006 are separated by 504 nucleotides H281DRAFT_00006 and H281DRAFT_00007 are separated by 207 nucleotides
H281DRAFT_00004: H281DRAFT_00004 - hypothetical protein, at 4,600 to 5,139
_00004
H281DRAFT_00005: H281DRAFT_00005 - hypothetical protein, at 5,295 to 5,576
_00005
H281DRAFT_00006: H281DRAFT_00006 - hypothetical protein, at 6,081 to 6,458
_00006
H281DRAFT_00007: H281DRAFT_00007 - Site-specific DNA recombinase, at 6,666 to 8,261
_00007
Position (kb)
6
7 Strain fitness (log2 ratio)
-1
0
1 at 5.085 kb on - strand, within H281DRAFT_00004 at 5.221 kb on - strand at 5.251 kb on + strand at 5.411 kb on + strand, within H281DRAFT_00005 at 5.411 kb on + strand, within H281DRAFT_00005 at 5.411 kb on + strand, within H281DRAFT_00005 at 5.481 kb on - strand, within H281DRAFT_00005 at 5.758 kb on - strand at 5.789 kb on + strand at 5.812 kb on + strand at 5.812 kb on + strand at 6.135 kb on - strand, within H281DRAFT_00006 at 6.135 kb on - strand, within H281DRAFT_00006 at 6.449 kb on - strand at 6.449 kb on - strand at 6.449 kb on - strand at 6.495 kb on + strand at 6.571 kb on + strand at 6.633 kb on + strand at 6.634 kb on - strand at 6.724 kb on - strand at 6.724 kb on - strand at 6.754 kb on - strand at 6.754 kb on - strand at 6.808 kb on + strand at 6.808 kb on + strand at 6.808 kb on + strand at 6.808 kb on + strand at 6.825 kb on + strand at 6.889 kb on + strand, within H281DRAFT_00007 at 6.889 kb on + strand, within H281DRAFT_00007 at 6.934 kb on - strand, within H281DRAFT_00007 at 6.934 kb on - strand, within H281DRAFT_00007 at 6.934 kb on - strand, within H281DRAFT_00007 at 6.934 kb on - strand, within H281DRAFT_00007 at 6.985 kb on - strand, within H281DRAFT_00007 at 6.990 kb on + strand, within H281DRAFT_00007 at 6.990 kb on + strand, within H281DRAFT_00007 at 7.024 kb on - strand, within H281DRAFT_00007 at 7.070 kb on - strand, within H281DRAFT_00007 at 7.072 kb on + strand, within H281DRAFT_00007 at 7.129 kb on + strand, within H281DRAFT_00007 at 7.254 kb on + strand, within H281DRAFT_00007 at 7.298 kb on + strand, within H281DRAFT_00007 at 7.318 kb on + strand, within H281DRAFT_00007 at 7.338 kb on + strand, within H281DRAFT_00007
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 5,085 - H281DRAFT_00004 0.90 -1.4 5,221 - -1.5 5,251 + +0.1 5,411 + H281DRAFT_00005 0.41 -0.2 5,411 + H281DRAFT_00005 0.41 -0.0 5,411 + H281DRAFT_00005 0.41 -0.3 5,481 - H281DRAFT_00005 0.66 -1.4 5,758 - -0.2 5,789 + -0.1 5,812 + +0.1 5,812 + -0.1 6,135 - H281DRAFT_00006 0.14 +0.4 6,135 - H281DRAFT_00006 0.14 +0.4 6,449 - +0.2 6,449 - +1.3 6,449 - +1.0 6,495 + +0.1 6,571 + -1.0 6,633 + -0.9 6,634 - -0.2 6,724 - +0.8 6,724 - -0.2 6,754 - +0.3 6,754 - -0.9 6,808 + -0.6 6,808 + -0.4 6,808 + +0.1 6,808 + -0.3 6,825 + +0.7 6,889 + H281DRAFT_00007 0.14 +0.1 6,889 + H281DRAFT_00007 0.14 +0.0 6,934 - H281DRAFT_00007 0.17 -0.3 6,934 - H281DRAFT_00007 0.17 +1.0 6,934 - H281DRAFT_00007 0.17 -0.7 6,934 - H281DRAFT_00007 0.17 +0.8 6,985 - H281DRAFT_00007 0.20 -1.5 6,990 + H281DRAFT_00007 0.20 -0.7 6,990 + H281DRAFT_00007 0.20 -0.5 7,024 - H281DRAFT_00007 0.22 -0.4 7,070 - H281DRAFT_00007 0.25 +1.7 7,072 + H281DRAFT_00007 0.25 +0.3 7,129 + H281DRAFT_00007 0.29 -0.3 7,254 + H281DRAFT_00007 0.37 -1.5 7,298 + H281DRAFT_00007 0.40 -0.3 7,318 + H281DRAFT_00007 0.41 -0.0 7,338 + H281DRAFT_00007 0.42 +0.0
Or see this region's nucleotide sequence