Strain Fitness in Dechlorosoma suillum PS around Dsui_2727

Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2725 and Dsui_2726 overlap by 11 nucleotidesDsui_2726 and Dsui_2727 overlap by 20 nucleotidesDsui_2727 and Dsui_2728 are separated by 1 nucleotides Dsui_2725: Dsui_2725 - pseudouridine synthase family protein, at 2,881,117 to 2,882,262 _2725 Dsui_2726: Dsui_2726 - segregation and condensation protein B, at 2,882,252 to 2,882,809 _2726 Dsui_2727: Dsui_2727 - hypothetical protein, at 2,882,790 to 2,883,713 _2727 Dsui_2728: Dsui_2728 - tryptophanyl-tRNA synthetase, at 2,883,715 to 2,884,917 _2728 Position (kb) 2882 2883 2884Strain fitness (log2 ratio) -3 -2 -1 0 1at 2882.283 kb on - strandat 2882.331 kb on - strand, within Dsui_2726at 2882.495 kb on - strand, within Dsui_2726at 2882.870 kb on - strandat 2882.900 kb on - strand, within Dsui_2727at 2882.958 kb on - strand, within Dsui_2727at 2882.968 kb on - strand, within Dsui_2727at 2883.073 kb on - strand, within Dsui_2727at 2883.228 kb on - strand, within Dsui_2727at 2883.354 kb on - strand, within Dsui_2727at 2883.816 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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2,882,283 - +1.2
2,882,331 - Dsui_2726 0.14 +0.5
2,882,495 - Dsui_2726 0.44 -2.5
2,882,870 - -2.4
2,882,900 - Dsui_2727 0.12 -0.9
2,882,958 - Dsui_2727 0.18 -2.9
2,882,968 - Dsui_2727 0.19 -1.7
2,883,073 - Dsui_2727 0.31 -2.0
2,883,228 - Dsui_2727 0.47 -0.5
2,883,354 - Dsui_2727 0.61 -2.1
2,883,816 + +0.7

Or see this region's nucleotide sequence