Strain Fitness in Dechlorosoma suillum PS around Dsui_2633

Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2630 and Dsui_2631 are separated by 8 nucleotidesDsui_2631 and Dsui_2632 are separated by 44 nucleotidesDsui_2632 and Dsui_2633 are separated by 76 nucleotidesDsui_2633 and Dsui_2634 are separated by 674 nucleotides Dsui_2630: Dsui_2630 - flagellar basal-body rod protein FlgB, at 2,782,507 to 2,783,145 _2630 Dsui_2631: Dsui_2631 - hypothetical protein, at 2,783,154 to 2,783,396 _2631 Dsui_2632: Dsui_2632 - hypothetical protein, at 2,783,441 to 2,783,689 _2632 Dsui_2633: Dsui_2633 - hypothetical protein, at 2,783,766 to 2,784,023 _2633 Dsui_2634: Dsui_2634 - cytochrome c, mono- and diheme variants family, at 2,784,698 to 2,785,084 _2634 Position (kb) 2783 2784 2785Strain fitness (log2 ratio) -3 -2 -1 0 1at 2782.888 kb on + strand, within Dsui_2630at 2783.061 kb on + strand, within Dsui_2630at 2783.061 kb on + strand, within Dsui_2630at 2783.066 kb on + strand, within Dsui_2630at 2783.066 kb on + strand, within Dsui_2630at 2783.066 kb on + strand, within Dsui_2630at 2783.066 kb on + strand, within Dsui_2630at 2783.074 kb on + strand, within Dsui_2630at 2783.084 kb on - strandat 2783.086 kb on + strandat 2783.106 kb on - strandat 2783.129 kb on + strandat 2783.184 kb on - strand, within Dsui_2631at 2783.184 kb on - strand, within Dsui_2631at 2783.329 kb on - strand, within Dsui_2631at 2783.380 kb on + strandat 2783.426 kb on - strandat 2783.461 kb on + strandat 2783.480 kb on - strand, within Dsui_2632at 2783.480 kb on - strand, within Dsui_2632at 2783.705 kb on + strandat 2783.705 kb on + strandat 2783.708 kb on - strandat 2783.852 kb on - strand, within Dsui_2633at 2783.872 kb on + strand, within Dsui_2633at 2783.904 kb on + strand, within Dsui_2633at 2783.967 kb on + strand, within Dsui_2633at 2783.975 kb on - strand, within Dsui_2633at 2783.975 kb on - strand, within Dsui_2633at 2783.976 kb on - strand, within Dsui_2633at 2783.987 kb on + strand, within Dsui_2633at 2784.000 kb on + strandat 2784.055 kb on - strandat 2784.071 kb on + strandat 2784.084 kb on - strandat 2784.092 kb on + strandat 2784.100 kb on - strandat 2784.100 kb on - strandat 2784.144 kb on + strandat 2784.157 kb on - strandat 2784.159 kb on + strandat 2784.159 kb on + strandat 2784.215 kb on - strandat 2784.217 kb on - strandat 2784.359 kb on + strandat 2784.472 kb on - strandat 2784.509 kb on - strandat 2784.553 kb on - strandat 2784.711 kb on + strandat 2785.004 kb on + strand, within Dsui_2634at 2785.010 kb on + strand, within Dsui_2634

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Per-strain Table

Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
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2,782,888 + Dsui_2630 0.60 +0.4
2,783,061 + Dsui_2630 0.87 -0.7
2,783,061 + Dsui_2630 0.87 -0.1
2,783,066 + Dsui_2630 0.87 +0.7
2,783,066 + Dsui_2630 0.87 -0.6
2,783,066 + Dsui_2630 0.87 +0.2
2,783,066 + Dsui_2630 0.87 -2.0
2,783,074 + Dsui_2630 0.89 +0.8
2,783,084 - -1.3
2,783,086 + +0.5
2,783,106 - -1.6
2,783,129 + -0.6
2,783,184 - Dsui_2631 0.12 -3.2
2,783,184 - Dsui_2631 0.12 -1.1
2,783,329 - Dsui_2631 0.72 -0.7
2,783,380 + -0.6
2,783,426 - -0.0
2,783,461 + +0.2
2,783,480 - Dsui_2632 0.16 -0.6
2,783,480 - Dsui_2632 0.16 -2.8
2,783,705 + -1.7
2,783,705 + -1.8
2,783,708 - -0.4
2,783,852 - Dsui_2633 0.33 -0.4
2,783,872 + Dsui_2633 0.41 -0.4
2,783,904 + Dsui_2633 0.53 -2.0
2,783,967 + Dsui_2633 0.78 -0.5
2,783,975 - Dsui_2633 0.81 -0.6
2,783,975 - Dsui_2633 0.81 +1.7
2,783,976 - Dsui_2633 0.81 +1.1
2,783,987 + Dsui_2633 0.86 -1.2
2,784,000 + -0.6
2,784,055 - +0.5
2,784,071 + -1.0
2,784,084 - +0.8
2,784,092 + -1.6
2,784,100 - -1.4
2,784,100 - +0.7
2,784,144 + -1.4
2,784,157 - -0.8
2,784,159 + +1.3
2,784,159 + +0.1
2,784,215 - -1.9
2,784,217 - -1.1
2,784,359 + -2.9
2,784,472 - +0.3
2,784,509 - +0.5
2,784,553 - +0.4
2,784,711 + +0.4
2,785,004 + Dsui_2634 0.79 -3.1
2,785,010 + Dsui_2634 0.81 -2.4

Or see this region's nucleotide sequence