Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2251 and Dsui_2252 are separated by 18 nucleotides Dsui_2252 and Dsui_2253 are separated by 220 nucleotides
Dsui_2251: Dsui_2251 - signal transduction histidine kinase, at 2,398,675 to 2,400,147
_2251
Dsui_2252: Dsui_2252 - transcriptional regulator with HTH domain and aminotransferase domain, at 2,400,166 to 2,401,707
_2252
Dsui_2253: Dsui_2253 - benzoate transporter, at 2,401,928 to 2,403,154
_2253
Position (kb)
2400
2401
2402 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2399.258 kb on - strand, within Dsui_2251 at 2399.297 kb on + strand at 2399.525 kb on - strand, within Dsui_2251 at 2399.572 kb on - strand at 2399.612 kb on + strand, within Dsui_2251 at 2399.618 kb on + strand at 2399.709 kb on + strand, within Dsui_2251 at 2399.779 kb on - strand at 2399.808 kb on + strand, within Dsui_2251 at 2399.876 kb on + strand at 2399.978 kb on + strand, within Dsui_2251 at 2399.982 kb on - strand, within Dsui_2251 at 2399.983 kb on - strand, within Dsui_2251 at 2400.132 kb on - strand at 2400.137 kb on - strand at 2400.141 kb on + strand at 2400.149 kb on - strand at 2400.149 kb on - strand at 2400.283 kb on - strand at 2400.290 kb on + strand at 2400.507 kb on - strand, within Dsui_2252 at 2400.587 kb on + strand at 2400.617 kb on - strand, within Dsui_2252 at 2400.630 kb on + strand at 2400.687 kb on + strand, within Dsui_2252 at 2400.812 kb on - strand, within Dsui_2252 at 2400.947 kb on - strand, within Dsui_2252 at 2401.025 kb on - strand, within Dsui_2252 at 2401.100 kb on + strand, within Dsui_2252 at 2401.149 kb on - strand, within Dsui_2252 at 2401.154 kb on + strand, within Dsui_2252 at 2401.162 kb on - strand, within Dsui_2252 at 2401.541 kb on - strand, within Dsui_2252 at 2401.584 kb on + strand at 2401.634 kb on + strand at 2401.664 kb on - strand at 2401.670 kb on - strand at 2401.886 kb on + strand at 2401.920 kb on - strand at 2402.021 kb on - strand at 2402.241 kb on - strand at 2402.255 kb on - strand, within Dsui_2253 at 2402.407 kb on + strand at 2402.580 kb on - strand at 2402.677 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 2,399,258 - Dsui_2251 0.40 +0.2 2,399,297 + -0.4 2,399,525 - Dsui_2251 0.58 -2.0 2,399,572 - +1.2 2,399,612 + Dsui_2251 0.64 -2.2 2,399,618 + +0.8 2,399,709 + Dsui_2251 0.70 -1.8 2,399,779 - -1.8 2,399,808 + Dsui_2251 0.77 +0.0 2,399,876 + -1.9 2,399,978 + Dsui_2251 0.88 -2.1 2,399,982 - Dsui_2251 0.89 -2.3 2,399,983 - Dsui_2251 0.89 -1.4 2,400,132 - -2.8 2,400,137 - +0.8 2,400,141 + +0.2 2,400,149 - -0.8 2,400,149 - -1.2 2,400,283 - +1.1 2,400,290 + -0.6 2,400,507 - Dsui_2252 0.22 +1.3 2,400,587 + -2.4 2,400,617 - Dsui_2252 0.29 +0.8 2,400,630 + -1.2 2,400,687 + Dsui_2252 0.34 +0.3 2,400,812 - Dsui_2252 0.42 +1.2 2,400,947 - Dsui_2252 0.51 -0.9 2,401,025 - Dsui_2252 0.56 +1.4 2,401,100 + Dsui_2252 0.61 +0.9 2,401,149 - Dsui_2252 0.64 +1.6 2,401,154 + Dsui_2252 0.64 -0.1 2,401,162 - Dsui_2252 0.65 +0.6 2,401,541 - Dsui_2252 0.89 -0.9 2,401,584 + -0.7 2,401,634 + +1.7 2,401,664 - +1.4 2,401,670 - +2.0 2,401,886 + -1.4 2,401,920 - -1.0 2,402,021 - +1.6 2,402,241 - -2.0 2,402,255 - Dsui_2253 0.27 -1.5 2,402,407 + +1.3 2,402,580 - -2.3 2,402,677 - -0.4
Or see this region's nucleotide sequence