Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1525 and Dsui_1526 are separated by 73 nucleotides Dsui_1526 and Dsui_1527 are separated by 635 nucleotides Dsui_1527 and Dsui_1528 are separated by 165 nucleotides
Dsui_1525: Dsui_1525 - sulfate/thiosulfate-binding protein, at 1,587,583 to 1,588,590
_1525
Dsui_1526: Dsui_1526 - hypothetical protein, at 1,588,664 to 1,588,861
_1526
Dsui_1527: Dsui_1527 - hypothetical protein, at 1,589,497 to 1,589,706
_1527
Dsui_1528: Dsui_1528 - signal transduction histidine kinase, at 1,589,872 to 1,591,311
_1528
Position (kb)
1589
1590 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1588.507 kb on - strand at 1588.519 kb on + strand at 1588.519 kb on + strand at 1588.536 kb on - strand at 1588.571 kb on - strand at 1588.572 kb on + strand at 1588.572 kb on + strand at 1588.655 kb on + strand at 1588.726 kb on + strand, within Dsui_1526 at 1588.726 kb on + strand at 1588.734 kb on - strand, within Dsui_1526 at 1588.754 kb on + strand, within Dsui_1526 at 1588.782 kb on - strand, within Dsui_1526 at 1588.803 kb on - strand, within Dsui_1526 at 1588.803 kb on - strand, within Dsui_1526 at 1588.831 kb on + strand, within Dsui_1526 at 1588.870 kb on + strand at 1588.892 kb on - strand at 1588.922 kb on - strand at 1588.922 kb on - strand at 1589.161 kb on - strand at 1589.163 kb on + strand at 1589.164 kb on - strand at 1589.203 kb on + strand at 1589.218 kb on - strand at 1589.275 kb on - strand at 1589.877 kb on - strand at 1589.878 kb on + strand at 1589.879 kb on + strand at 1589.879 kb on + strand at 1589.947 kb on - strand at 1589.954 kb on - strand at 1590.111 kb on + strand, within Dsui_1528 at 1590.184 kb on - strand, within Dsui_1528 at 1590.234 kb on + strand, within Dsui_1528 at 1590.329 kb on - strand, within Dsui_1528 at 1590.382 kb on + strand, within Dsui_1528 at 1590.400 kb on - strand, within Dsui_1528 at 1590.506 kb on - strand, within Dsui_1528 at 1590.506 kb on - strand, within Dsui_1528 at 1590.533 kb on + strand, within Dsui_1528
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,588,507 - -3.7 1,588,519 + -1.6 1,588,519 + -1.6 1,588,536 - -1.1 1,588,571 - -2.8 1,588,572 + +0.3 1,588,572 + +1.5 1,588,655 + +0.5 1,588,726 + Dsui_1526 0.31 -0.7 1,588,726 + -1.0 1,588,734 - Dsui_1526 0.35 -1.3 1,588,754 + Dsui_1526 0.45 -0.8 1,588,782 - Dsui_1526 0.60 -1.1 1,588,803 - Dsui_1526 0.70 +0.9 1,588,803 - Dsui_1526 0.70 +0.8 1,588,831 + Dsui_1526 0.84 +0.5 1,588,870 + +0.4 1,588,892 - +1.4 1,588,922 - +0.7 1,588,922 - +1.0 1,589,161 - -0.1 1,589,163 + +0.7 1,589,164 - +1.8 1,589,203 + +0.3 1,589,218 - +1.4 1,589,275 - +0.7 1,589,877 - +0.8 1,589,878 + -0.5 1,589,879 + +0.2 1,589,879 + -0.6 1,589,947 - +0.3 1,589,954 - -0.5 1,590,111 + Dsui_1528 0.17 -2.8 1,590,184 - Dsui_1528 0.22 -2.1 1,590,234 + Dsui_1528 0.25 -1.5 1,590,329 - Dsui_1528 0.32 +0.4 1,590,382 + Dsui_1528 0.35 -1.8 1,590,400 - Dsui_1528 0.37 -0.9 1,590,506 - Dsui_1528 0.44 -2.0 1,590,506 - Dsui_1528 0.44 -0.1 1,590,533 + Dsui_1528 0.46 -1.8
Or see this region's nucleotide sequence