Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1284 and Dsui_1285 overlap by 4 nucleotides Dsui_1285 and Dsui_1286 overlap by 4 nucleotides Dsui_1286 and Dsui_1287 overlap by 10 nucleotides
Dsui_1284: Dsui_1284 - hypothetical protein, at 1,344,825 to 1,345,418
_1284
Dsui_1285: Dsui_1285 - prepilin-type N-terminal cleavage/methylation domain-containing protein, at 1,345,415 to 1,346,239
_1285
Dsui_1286: Dsui_1286 - hypothetical protein, at 1,346,236 to 1,346,712
_1286
Dsui_1287: Dsui_1287 - hypothetical protein, at 1,346,703 to 1,351,481
_1287
Position (kb)
1346
1347 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1345.326 kb on + strand, within Dsui_1284 at 1345.330 kb on - strand, within Dsui_1284 at 1345.339 kb on - strand, within Dsui_1284 at 1345.451 kb on - strand at 1345.451 kb on - strand at 1345.451 kb on - strand at 1345.504 kb on + strand, within Dsui_1285 at 1345.558 kb on - strand, within Dsui_1285 at 1345.564 kb on + strand, within Dsui_1285 at 1345.596 kb on - strand, within Dsui_1285 at 1345.603 kb on + strand, within Dsui_1285 at 1345.621 kb on + strand, within Dsui_1285 at 1345.621 kb on + strand, within Dsui_1285 at 1345.764 kb on + strand, within Dsui_1285 at 1345.766 kb on - strand, within Dsui_1285 at 1345.808 kb on - strand, within Dsui_1285 at 1345.897 kb on - strand, within Dsui_1285 at 1345.917 kb on - strand, within Dsui_1285 at 1345.953 kb on + strand, within Dsui_1285 at 1346.040 kb on - strand, within Dsui_1285 at 1346.047 kb on + strand, within Dsui_1285 at 1346.050 kb on - strand, within Dsui_1285 at 1346.075 kb on - strand, within Dsui_1285 at 1346.137 kb on + strand, within Dsui_1285 at 1346.327 kb on + strand, within Dsui_1286 at 1346.358 kb on - strand, within Dsui_1286 at 1346.449 kb on + strand, within Dsui_1286 at 1346.457 kb on - strand, within Dsui_1286 at 1346.457 kb on - strand, within Dsui_1286 at 1346.499 kb on - strand, within Dsui_1286 at 1346.512 kb on + strand, within Dsui_1286 at 1346.520 kb on - strand, within Dsui_1286 at 1346.535 kb on - strand, within Dsui_1286 at 1346.535 kb on - strand, within Dsui_1286 at 1346.537 kb on + strand, within Dsui_1286 at 1346.558 kb on + strand, within Dsui_1286 at 1346.568 kb on - strand, within Dsui_1286 at 1346.579 kb on + strand, within Dsui_1286 at 1346.604 kb on - strand, within Dsui_1286 at 1346.632 kb on + strand, within Dsui_1286 at 1346.650 kb on - strand, within Dsui_1286 at 1346.727 kb on + strand at 1346.782 kb on - strand at 1346.788 kb on - strand at 1346.818 kb on - strand at 1346.872 kb on - strand at 1346.910 kb on - strand at 1346.924 kb on + strand at 1346.929 kb on + strand at 1346.997 kb on - strand at 1347.010 kb on + strand at 1347.027 kb on + strand at 1347.042 kb on + strand at 1347.053 kb on + strand at 1347.061 kb on + strand at 1347.079 kb on - strand at 1347.082 kb on + strand at 1347.082 kb on + strand at 1347.094 kb on + strand at 1347.125 kb on - strand at 1347.125 kb on - strand at 1347.125 kb on - strand at 1347.135 kb on - strand at 1347.164 kb on + strand at 1347.164 kb on + strand at 1347.184 kb on - strand, within Dsui_1287 at 1347.244 kb on + strand, within Dsui_1287 at 1347.252 kb on - strand, within Dsui_1287 at 1347.252 kb on - strand at 1347.309 kb on + strand, within Dsui_1287 at 1347.317 kb on - strand, within Dsui_1287 at 1347.357 kb on + strand, within Dsui_1287 at 1347.365 kb on + strand, within Dsui_1287 at 1347.365 kb on - strand, within Dsui_1287 at 1347.365 kb on - strand, within Dsui_1287 at 1347.515 kb on - strand, within Dsui_1287 at 1347.522 kb on - strand, within Dsui_1287 at 1347.615 kb on + strand, within Dsui_1287 at 1347.615 kb on + strand, within Dsui_1287 at 1347.622 kb on + strand, within Dsui_1287 at 1347.623 kb on - strand, within Dsui_1287 at 1347.672 kb on - strand, within Dsui_1287 at 1347.688 kb on - strand, within Dsui_1287
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 1,345,326 + Dsui_1284 0.84 -1.8 1,345,330 - Dsui_1284 0.85 -1.0 1,345,339 - Dsui_1284 0.87 -1.5 1,345,451 - +0.4 1,345,451 - -1.4 1,345,451 - -2.7 1,345,504 + Dsui_1285 0.11 -1.9 1,345,558 - Dsui_1285 0.17 -1.7 1,345,564 + Dsui_1285 0.18 -1.0 1,345,596 - Dsui_1285 0.22 -2.4 1,345,603 + Dsui_1285 0.23 -4.1 1,345,621 + Dsui_1285 0.25 -0.3 1,345,621 + Dsui_1285 0.25 -1.8 1,345,764 + Dsui_1285 0.42 -1.4 1,345,766 - Dsui_1285 0.43 -4.9 1,345,808 - Dsui_1285 0.48 -2.8 1,345,897 - Dsui_1285 0.58 -1.7 1,345,917 - Dsui_1285 0.61 -2.1 1,345,953 + Dsui_1285 0.65 -1.3 1,346,040 - Dsui_1285 0.76 -4.3 1,346,047 + Dsui_1285 0.77 -1.8 1,346,050 - Dsui_1285 0.77 -1.3 1,346,075 - Dsui_1285 0.80 -4.0 1,346,137 + Dsui_1285 0.88 -1.6 1,346,327 + Dsui_1286 0.19 -3.2 1,346,358 - Dsui_1286 0.26 +2.0 1,346,449 + Dsui_1286 0.45 -1.6 1,346,457 - Dsui_1286 0.46 -3.2 1,346,457 - Dsui_1286 0.46 -2.1 1,346,499 - Dsui_1286 0.55 -2.1 1,346,512 + Dsui_1286 0.58 -1.8 1,346,520 - Dsui_1286 0.60 -2.1 1,346,535 - Dsui_1286 0.63 -4.6 1,346,535 - Dsui_1286 0.63 -4.0 1,346,537 + Dsui_1286 0.63 -4.7 1,346,558 + Dsui_1286 0.68 -1.0 1,346,568 - Dsui_1286 0.70 -2.9 1,346,579 + Dsui_1286 0.72 -1.6 1,346,604 - Dsui_1286 0.77 -2.5 1,346,632 + Dsui_1286 0.83 -2.2 1,346,650 - Dsui_1286 0.87 -0.2 1,346,727 + +0.7 1,346,782 - -1.8 1,346,788 - -2.9 1,346,818 - -3.3 1,346,872 - -1.4 1,346,910 - -1.5 1,346,924 + -0.8 1,346,929 + -1.2 1,346,997 - -3.9 1,347,010 + -1.9 1,347,027 + -0.6 1,347,042 + -1.1 1,347,053 + -1.8 1,347,061 + -1.4 1,347,079 - -0.3 1,347,082 + -1.6 1,347,082 + -1.2 1,347,094 + -2.4 1,347,125 - -1.8 1,347,125 - -1.6 1,347,125 - -2.4 1,347,135 - -1.0 1,347,164 + -1.3 1,347,164 + -2.1 1,347,184 - Dsui_1287 0.10 -3.3 1,347,244 + Dsui_1287 0.11 -2.5 1,347,252 - Dsui_1287 0.11 -3.0 1,347,252 - -1.6 1,347,309 + Dsui_1287 0.13 -1.1 1,347,317 - Dsui_1287 0.13 -4.2 1,347,357 + Dsui_1287 0.14 -1.4 1,347,365 + Dsui_1287 0.14 -1.9 1,347,365 - Dsui_1287 0.14 -0.0 1,347,365 - Dsui_1287 0.14 -2.4 1,347,515 - Dsui_1287 0.17 -1.8 1,347,522 - Dsui_1287 0.17 -0.9 1,347,615 + Dsui_1287 0.19 -2.2 1,347,615 + Dsui_1287 0.19 -1.7 1,347,622 + Dsui_1287 0.19 +1.2 1,347,623 - Dsui_1287 0.19 -1.6 1,347,672 - Dsui_1287 0.20 -2.6 1,347,688 - Dsui_1287 0.21 -3.5
Or see this region's nucleotide sequence