Experiment: spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0048 and Dsui_0049 are separated by 43 nucleotides Dsui_0049 and Dsui_0050 are separated by 69 nucleotides
Dsui_0048: Dsui_0048 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 44,684 to 45,622
_0048
Dsui_0049: Dsui_0049 - uncharacterized membrane-anchored protein, at 45,666 to 46,976
_0049
Dsui_0050: Dsui_0050 - fructose-bisphosphate aldolase, class II, Calvin cycle subtype, at 47,046 to 48,110
_0050
Position (kb) 45
46
47 Strain fitness (log2 ratio) -1
0
1
2
3 at 44.701 kb on - strand at 45.632 kb on - strand at 45.666 kb on + strand at 45.681 kb on - strand at 45.681 kb on - strand at 45.802 kb on + strand, within Dsui_0049 at 45.802 kb on + strand at 45.802 kb on + strand at 45.802 kb on + strand at 45.810 kb on - strand, within Dsui_0049 at 45.810 kb on - strand, within Dsui_0049 at 45.812 kb on + strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.822 kb on - strand, within Dsui_0049 at 45.863 kb on + strand, within Dsui_0049 at 45.866 kb on + strand, within Dsui_0049 at 45.907 kb on - strand, within Dsui_0049 at 46.044 kb on + strand, within Dsui_0049 at 46.052 kb on - strand, within Dsui_0049 at 46.306 kb on + strand, within Dsui_0049 at 46.323 kb on + strand, within Dsui_0049 at 46.389 kb on + strand, within Dsui_0049 at 46.416 kb on - strand, within Dsui_0049 at 46.607 kb on + strand, within Dsui_0049 at 46.646 kb on + strand, within Dsui_0049 at 46.664 kb on + strand, within Dsui_0049 at 46.694 kb on + strand, within Dsui_0049 at 46.735 kb on - strand, within Dsui_0049 at 46.735 kb on - strand, within Dsui_0049 at 46.770 kb on - strand, within Dsui_0049 at 46.810 kb on + strand, within Dsui_0049 at 46.903 kb on - strand at 46.917 kb on + strand at 46.925 kb on - strand at 46.965 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction spiked with 1 mM Stressor (H2S) + 10 mM ClO4 and 20 mM lactate remove 44,701 - +0.6 45,632 - -1.5 45,666 + -0.0 45,681 - +1.5 45,681 - -0.3 45,802 + Dsui_0049 0.10 -0.3 45,802 + -1.5 45,802 + +1.8 45,802 + +0.5 45,810 - Dsui_0049 0.11 +0.6 45,810 - Dsui_0049 0.11 +1.1 45,812 + Dsui_0049 0.11 +0.6 45,822 - Dsui_0049 0.12 +1.2 45,822 - Dsui_0049 0.12 +1.5 45,863 + Dsui_0049 0.15 +0.8 45,866 + Dsui_0049 0.15 -0.7 45,907 - Dsui_0049 0.18 +1.4 46,044 + Dsui_0049 0.29 +0.2 46,052 - Dsui_0049 0.29 +2.6 46,306 + Dsui_0049 0.49 +0.0 46,323 + Dsui_0049 0.50 -0.1 46,389 + Dsui_0049 0.55 +0.9 46,416 - Dsui_0049 0.57 +1.4 46,607 + Dsui_0049 0.72 -0.1 46,646 + Dsui_0049 0.75 -0.9 46,664 + Dsui_0049 0.76 +1.1 46,694 + Dsui_0049 0.78 +2.0 46,735 - Dsui_0049 0.82 +0.8 46,735 - Dsui_0049 0.82 +0.1 46,770 - Dsui_0049 0.84 +1.5 46,810 + Dsui_0049 0.87 +0.0 46,903 - +0.6 46,917 + +2.8 46,925 - +2.2 46,965 + -0.0
Or see this region's nucleotide sequence