Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29330

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
6,372,156	-		AO353_29325	0.78	-0.9
6,372,156	-		AO353_29325	0.78	+0.1
6,372,156	-		AO353_29325	0.78	+0.2
6,372,231	+		AO353_29325	0.84	-2.4
6,372,231	+		AO353_29325	0.84	+0.0
6,372,231	+		AO353_29325	0.84	+1.1
6,372,231	+		AO353_29325	0.84	-0.9
6,372,231	+		AO353_29325	0.84	+1.7
6,372,231	+		AO353_29325	0.84	+0.7
6,372,231	+		AO353_29325	0.84	+1.7
6,372,231	+		AO353_29325	0.84	-1.0
6,372,231	+		AO353_29325	0.84	-1.3
6,372,232	-		AO353_29325	0.84	+0.4
6,372,232	-		AO353_29325	0.84	-0.7
6,372,232	-		AO353_29325	0.84	-2.3
6,372,232	-		AO353_29325	0.84	+2.5
6,372,232	-		AO353_29325	0.84	-0.4
6,372,232	-		AO353_29325	0.84	+0.5
6,372,232	-		AO353_29325	0.84	-0.3
6,372,232	-		AO353_29325	0.84	+1.1
6,372,232	-		AO353_29325	0.84	-0.7
6,372,232	-		AO353_29325	0.84	-1.6
6,372,232	-		AO353_29325	0.84	-0.0
6,372,232	-		AO353_29325	0.84	-2.2
6,372,232	-		AO353_29325	0.84	+1.1
6,372,285	+		AO353_29325	0.88	-1.6
6,372,414	+				-1.6
6,372,414	+				-2.1
6,372,414	+				-1.5
6,372,414	+				-0.3
6,372,414	+				-2.1
6,372,415	-				+1.5
6,372,415	-				+1.0
6,372,438	-				+0.3
6,372,474	+				+0.4
6,372,475	-				-0.6
6,372,475	-				-1.3
6,372,498	-				-1.6
6,372,593	+				-0.0
6,372,683	-				-0.9
6,372,683	-				+1.6
6,372,829	+				-1.1
6,372,829	+				-1.3
6,372,829	+				+0.9
6,372,829	+				-1.9
6,372,829	+				+0.1
6,372,829	+				-0.7
6,372,829	+				+1.1
6,372,829	+				-0.1
6,372,829	+				-0.0
6,372,830	-				-0.6
6,372,830	-				-1.3
6,372,830	-				-1.0
6,372,877	-				-1.6
6,372,877	-				-0.3
6,373,101	+		AO353_29330	0.24	+1.7
6,373,101	+		AO353_29330	0.24	-2.1
6,373,101	+		AO353_29330	0.24	+1.6
6,373,102	-		AO353_29330	0.24	+1.5
6,373,102	-		AO353_29330	0.24	-0.8
6,373,102	-		AO353_29330	0.24	-1.9
6,373,102	-		AO353_29330	0.24	+0.5
6,373,102	-		AO353_29330	0.24	-0.9
6,373,102	-		AO353_29330	0.24	-0.1
6,373,102	-		AO353_29330	0.24	-0.0
6,373,102	-		AO353_29330	0.24	+0.7
6,373,102	-		AO353_29330	0.24	+1.3
6,373,205	+		AO353_29330	0.33	-0.4
6,373,206	-		AO353_29330	0.33	-0.4
6,373,285	-		AO353_29330	0.40	-2.1
6,373,285	-		AO353_29330	0.40	-2.4
6,373,285	-		AO353_29330	0.40	+0.5
6,373,285	-		AO353_29330	0.40	+0.9
6,373,285	-				+0.1
6,373,285	-		AO353_29330	0.40	+2.0
6,373,314	+		AO353_29330	0.42	+2.0
6,373,315	-		AO353_29330	0.42	+1.4
6,373,471	+		AO353_29330	0.55	-1.9
6,373,471	+		AO353_29330	0.55	+0.5
6,373,472	-		AO353_29330	0.55	+2.5
6,373,472	-		AO353_29330	0.55	-3.1
6,373,527	+		AO353_29330	0.60	-1.3
6,373,527	+		AO353_29330	0.60	+0.7
6,373,528	-		AO353_29330	0.60	-1.1
6,373,674	+		AO353_29330	0.72	+0.4
6,373,674	+		AO353_29330	0.72	+1.5
6,373,675	-		AO353_29330	0.72	+0.8
6,373,675	-		AO353_29330	0.72	-0.0
6,373,675	-		AO353_29330	0.72	+1.7
6,373,704	+		AO353_29330	0.74	-0.3
6,373,704	+		AO353_29330	0.74	-2.6
6,373,704	+		AO353_29330	0.74	-0.1
6,373,704	+		AO353_29330	0.74	+1.2
6,373,704	+		AO353_29330	0.74	+0.7
6,373,704	+		AO353_29330	0.74	+0.7
6,373,705	-		AO353_29330	0.74	+1.1
6,373,705	-		AO353_29330	0.74	-1.9
6,373,705	-		AO353_29330	0.74	-0.1
6,373,705	-		AO353_29330	0.74	-0.4
6,373,705	-		AO353_29330	0.74	+1.1
6,373,705	-		AO353_29330	0.74	-0.7
6,373,705	-		AO353_29330	0.74	+0.1
6,373,761	-		AO353_29330	0.79	+0.7
6,373,962	+				-0.1
6,373,962	+				-0.3
6,373,962	+				+0.7
6,373,962	+				-1.0
6,373,962	+				+1.1
6,373,963	-				+1.3
6,373,963	-				-0.0
6,373,963	-				+0.7
6,373,963	-				-0.5
6,373,963	-				+1.0
6,373,963	-				+1.3
6,373,963	-				+0.5
6,374,021	+				-0.3
6,374,103	+				+0.9
6,374,104	-				+0.7
6,374,174	-				-1.9
6,374,174	-				+0.7
6,374,174	-				-0.7
6,374,174	-				-0.9
6,374,177	+				-0.0
6,374,177	+				-2.5
6,374,178	-				-0.0
6,374,178	-				+1.7
6,374,287	+				-0.0
6,374,287	+				+3.1
6,374,288	-				+1.3
6,374,288	-				+0.2
6,374,288	-				-0.6
6,374,288	-				+0.5
6,374,288	-				-0.3
6,374,288	-				+1.7
6,374,338	+		AO353_29335	0.12	-0.3
6,374,338	+		AO353_29335	0.12	+1.6
6,374,338	+		AO353_29335	0.12	-0.9
6,374,339	-		AO353_29335	0.12	-1.6
6,374,339	-		AO353_29335	0.12	-2.1
6,374,339	-		AO353_29335	0.12	+0.4
6,374,339	-		AO353_29335	0.12	+1.0
6,374,366	-		AO353_29335	0.14	-1.3
6,374,366	-		AO353_29335	0.14	+0.4
6,374,368	+		AO353_29335	0.14	-0.1
6,374,369	-		AO353_29335	0.14	-0.3
6,374,443	+		AO353_29335	0.20	-2.0
6,374,443	+		AO353_29335	0.20	+0.5
6,374,443	+		AO353_29335	0.20	-0.6
6,374,444	-		AO353_29335	0.20	-1.1
6,374,444	-		AO353_29335	0.20	+0.7
6,374,444	-		AO353_29335	0.20	-2.1
6,374,444	-		AO353_29335	0.20	-1.3
6,374,444	-		AO353_29335	0.20	+0.3
6,374,444	-		AO353_29335	0.20	+1.0
6,374,593	+		AO353_29335	0.32	-0.6
6,374,593	+		AO353_29335	0.32	-0.5
6,374,593	+		AO353_29335	0.32	-1.0
6,374,594	-		AO353_29335	0.33	+0.5
6,374,594	-		AO353_29335	0.33	+1.1
6,374,594	-		AO353_29335	0.33	+0.3
6,374,608	+		AO353_29335	0.34	+0.7
6,374,641	+		AO353_29335	0.36	-1.8
6,374,707	+		AO353_29335	0.42	+1.1
6,374,742	+		AO353_29335	0.44	+2.3
6,374,742	+		AO353_29335	0.44	+0.5
6,374,742	+		AO353_29335	0.44	-0.5
6,374,743	-		AO353_29335	0.45	-0.1
6,374,743	-		AO353_29335	0.45	-0.8
6,374,743	-		AO353_29335	0.45	+0.1
6,374,764	+		AO353_29335	0.46	+0.5
6,374,765	-		AO353_29335	0.46	-0.9
6,374,813	+		AO353_29335	0.50	-0.9
6,374,813	+		AO353_29335	0.50	+0.0
6,374,813	+		AO353_29335	0.50	-0.9
6,374,813	+		AO353_29335	0.50	-0.9
6,374,813	+		AO353_29335	0.50	-2.3
6,374,813	+		AO353_29335	0.50	-1.0
6,374,813	+		AO353_29335	0.50	-1.7
6,374,813	+		AO353_29335	0.50	+0.7
6,374,813	+		AO353_29335	0.50	+0.4
6,374,813	+		AO353_29335	0.50	+0.1
6,374,813	+		AO353_29335	0.50	+1.8
6,374,813	+		AO353_29335	0.50	-1.9
6,374,813	+		AO353_29335	0.50	+1.6
6,374,814	-		AO353_29335	0.50	-1.6
6,374,814	-		AO353_29335	0.50	+1.7
6,374,814	-		AO353_29335	0.50	+0.1
6,374,814	-		AO353_29335	0.50	-0.0
6,374,814	-		AO353_29335	0.50	+1.9
6,374,814	-		AO353_29335	0.50	-1.3
6,374,814	-		AO353_29335	0.50	-1.3
6,374,814	-		AO353_29335	0.50	-0.4
6,374,814	-		AO353_29335	0.50	+1.1
6,374,814	-		AO353_29335	0.50	-0.9
6,374,814	-		AO353_29335	0.50	-0.6
6,374,814	-		AO353_29335	0.50	+0.1
6,374,814	-		AO353_29335	0.50	+0.2
6,374,814	-		AO353_29335	0.50	-1.6
6,374,814	-		AO353_29335	0.50	-1.3
6,374,814	-		AO353_29335	0.50	-1.2
6,374,911	+		AO353_29335	0.58	-1.0
6,374,911	+		AO353_29335	0.58	+0.7
6,374,911	+		AO353_29335	0.58	+0.9
6,374,912	-		AO353_29335	0.58	-0.6
6,374,912	-		AO353_29335	0.58	-0.3
6,374,912	-		AO353_29335	0.58	-1.6
6,374,912	-		AO353_29335	0.58	+0.6
6,374,912	-		AO353_29335	0.58	+0.7
6,374,912	-		AO353_29335	0.58	+1.6
6,374,947	+		AO353_29335	0.61	+0.7