Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29130

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
6,327,997	+		AO353_29125	0.25	-1.6
6,327,998	-		AO353_29125	0.25	-0.9
6,327,998	-		AO353_29125	0.25	+0.1
6,327,998	-		AO353_29125	0.25	+0.7
6,328,027	+		AO353_29125	0.27	+0.1
6,328,027	+		AO353_29125	0.27	-0.1
6,328,028	-		AO353_29125	0.28	-0.6
6,328,028	-		AO353_29125	0.28	+0.4
6,328,028	-		AO353_29125	0.28	-0.7
6,328,028	-		AO353_29125	0.28	-0.4
6,328,028	-		AO353_29125	0.28	-2.4
6,328,028	-		AO353_29125	0.28	+0.7
6,328,092	+		AO353_29125	0.33	-0.9
6,328,106	-		AO353_29125	0.34	-0.7
6,328,312	+		AO353_29125	0.52	-0.5
6,328,534	+		AO353_29125	0.72	+0.1
6,328,534	+		AO353_29125	0.72	+0.5
6,328,534	+		AO353_29125	0.72	+0.3
6,328,534	+		AO353_29125	0.72	+0.4
6,328,535	-		AO353_29125	0.72	+0.2
6,328,535	-		AO353_29125	0.72	-1.1
6,328,535	-		AO353_29125	0.72	-1.6
6,328,535	-		AO353_29125	0.72	+2.2
6,328,535	-		AO353_29125	0.72	-0.6
6,328,550	+		AO353_29125	0.73	+0.6
6,328,550	+		AO353_29125	0.73	+1.4
6,328,551	-		AO353_29125	0.73	-0.9
6,328,551	-		AO353_29125	0.73	+0.7
6,328,551	-		AO353_29125	0.73	-0.5
6,328,551	-		AO353_29125	0.73	-1.0
6,328,551	-		AO353_29125	0.73	-0.5
6,328,613	-		AO353_29125	0.78	-0.6
6,328,888	+				-0.7
6,328,888	+				-0.1
6,328,888	+				+2.3
6,328,889	-				-0.3
6,328,889	-				+0.6
6,328,889	-				+1.3
6,328,889	-				-1.1
6,328,889	-				-0.3
6,328,889	-				-1.6
6,328,890	+				-1.1
6,328,890	+				-1.0
6,328,891	-				+0.2
6,328,891	-				+0.9
6,329,034	+		AO353_29130	0.17	+0.5
6,329,034	+		AO353_29130	0.17	-1.3
6,329,034	+		AO353_29130	0.17	-0.9
6,329,034	+		AO353_29130	0.17	-0.0
6,329,034	+		AO353_29130	0.17	+0.4
6,329,034	+		AO353_29130	0.17	+1.3
6,329,035	-		AO353_29130	0.17	-1.3
6,329,035	-		AO353_29130	0.17	-0.3
6,329,035	-		AO353_29130	0.17	+1.7
6,329,035	-		AO353_29130	0.17	+0.2
6,329,035	-		AO353_29130	0.17	-1.6
6,329,035	-		AO353_29130	0.17	-0.5
6,329,035	-		AO353_29130	0.17	-0.5
6,329,035	-		AO353_29130	0.17	-1.3
6,329,035	-		AO353_29130	0.17	-0.6
6,329,035	-		AO353_29130	0.17	-0.0
6,329,040	+		AO353_29130	0.17	-0.6
6,329,041	-		AO353_29130	0.17	-2.2
6,329,041	-		AO353_29130	0.17	-1.0
6,329,041	-		AO353_29130	0.17	-1.2
6,329,041	-		AO353_29130	0.17	-0.9
6,329,175	+		AO353_29130	0.32	+1.6
6,329,175	+		AO353_29130	0.32	-1.3
6,329,175	+		AO353_29130	0.32	-1.1
6,329,175	-		AO353_29130	0.32	-0.1
6,329,176	-		AO353_29130	0.32	-1.3
6,329,176	-		AO353_29130	0.32	-0.9
6,329,176	-		AO353_29130	0.32	-0.6
6,329,176	-		AO353_29130	0.32	+0.1
6,329,283	+		AO353_29130	0.44	+0.7
6,329,284	-				+0.7
6,329,284	-		AO353_29130	0.44	-0.4
6,329,589	+		AO353_29130	0.77	+0.8
6,329,709	+				+1.7
6,329,709	+				-1.1
6,329,709	+				+1.0
6,329,709	+				+0.7
6,329,709	+				-0.1
6,329,709	+				-1.1
6,329,709	+				+0.5
6,329,709	+				+1.1
6,329,709	+				+0.7
6,329,710	-				-1.0
6,329,710	-				+0.3
6,329,710	-				+0.5
6,329,710	-				+1.5
6,329,710	-				+0.7
6,329,710	-				-2.1
6,329,710	-				+0.3
6,329,763	+				-0.4
6,329,763	+				+0.2
6,329,764	-				+1.2
6,329,764	-				-0.2
6,329,784	+				+0.5
6,329,784	+				+0.7
6,329,784	+				-2.1
6,329,784	+				+0.7
6,329,784	+				-0.3
6,329,784	+				-0.3
6,329,784	+				-1.4
6,329,785	-				-1.6
6,329,785	-				+0.7
6,329,785	-				-0.0
6,329,811	+				-0.1
6,329,863	+				+0.0
6,330,007	-				+0.7
6,330,041	-				+0.9
6,330,061	+				+0.7
6,330,061	+				+2.5
6,330,061	+				-1.3
6,330,069	+				-0.5
6,330,069	+				+1.7
6,330,069	+				+0.5
6,330,069	+				+2.3
6,330,069	+				+0.1
6,330,069	+				-1.3
6,330,070	-				+0.3
6,330,070	-				+1.1
6,330,070	-				-1.2
6,330,070	-				-1.9
6,330,070	-				+1.6
6,330,070	-				+0.6
6,330,070	-				+0.5
6,330,139	+				-0.3
6,330,140	-				-2.4
6,330,140	-				-0.5
6,330,149	+				+1.1
6,330,149	+				-1.1
6,330,149	+				+1.2
6,330,149	+				-2.1
6,330,150	-				+0.1
6,330,297	+				+0.5
6,330,297	+				+0.7
6,330,297	+				-0.5
6,330,297	+				-1.9
6,330,298	-				-0.3
6,330,298	-				+1.2
6,330,298	-				+0.7
6,330,324	+				+1.3
6,330,324	+				-1.3
6,330,324	+				+0.6
6,330,324	+				-0.9
6,330,324	+				+0.7
6,330,325	-				+0.5
6,330,325	-				+1.3
6,330,325	-				-0.4
6,330,325	-				+0.7
6,330,325	-				-0.6
6,330,325	-				-0.3
6,330,325	-				-1.6
6,330,386	-				+0.7
6,330,386	-				-1.1
6,330,386	-				+0.3
6,330,516	+		AO353_29135	0.21	-2.1
6,330,516	+		AO353_29135	0.21	-1.1
6,330,516	+		AO353_29135	0.21	-1.9
6,330,516	+		AO353_29135	0.21	-1.3
6,330,516	+		AO353_29135	0.21	-0.3
6,330,516	+		AO353_29135	0.21	-1.1
6,330,517	-		AO353_29135	0.21	-0.7
6,330,565	+		AO353_29135	0.26	+0.1
6,330,565	+		AO353_29135	0.26	+1.7
6,330,565	+		AO353_29135	0.26	-1.2
6,330,565	+		AO353_29135	0.26	+0.7
6,330,566	-		AO353_29135	0.27	-0.6
6,330,566	-		AO353_29135	0.27	-0.7
6,330,570	+		AO353_29135	0.27	-1.3
6,330,570	+		AO353_29135	0.27	+0.5
6,330,571	-		AO353_29135	0.27	-0.9
6,330,578	+		AO353_29135	0.28	+0.1
6,330,611	+		AO353_29135	0.32	-0.3
6,330,662	+		AO353_29135	0.37	-0.6
6,330,662	+		AO353_29135	0.37	-1.4
6,330,662	+		AO353_29135	0.37	+1.1
6,330,663	-		AO353_29135	0.37	+0.4
6,330,663	-		AO353_29135	0.37	-1.6