Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29105

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
6,323,073	-		AO353_29095	0.35	-0.9
6,323,104	+		AO353_29095	0.45	-0.1
6,323,104	+		AO353_29095	0.45	+0.4
6,323,105	-		AO353_29095	0.45	+1.7
6,323,105	-		AO353_29095	0.45	-0.9
6,323,105	-		AO353_29095	0.45	-0.9
6,323,183	+		AO353_29095	0.70	+1.1
6,323,184	-		AO353_29095	0.70	-0.3
6,323,208	+		AO353_29095	0.78	-2.4
6,323,208	+		AO353_29095	0.78	-0.8
6,323,209	-		AO353_29095	0.78	-0.1
6,323,234	+		AO353_29095	0.86	+1.2
6,323,235	-		AO353_29095	0.87	-2.0
6,323,275	-				+2.3
6,323,290	-				+1.1
6,323,312	+				-1.0
6,323,312	+				+1.9
6,323,312	+				+1.5
6,323,312	+				+2.7
6,323,313	-				-1.9
6,323,313	-				+0.5
6,323,313	-				-2.3
6,323,313	-				-0.3
6,323,313	-				-1.9
6,323,313	-				-0.3
6,323,313	-				-0.9
6,323,313	-				+0.7
6,323,324	+				-1.3
6,323,324	+				-1.1
6,323,324	+				-0.9
6,323,324	+				+0.6
6,323,324	+				-0.9
6,323,324	+				-0.1
6,323,324	+				-0.3
6,323,325	-				+0.1
6,323,325	-				-0.9
6,323,325	-				-0.3
6,323,325	-				-0.1
6,323,325	-				-0.5
6,323,325	-				+1.5
6,323,325	-				-0.7
6,323,327	-				-1.0
6,323,327	-				+0.3
6,323,327	-				-1.3
6,323,354	-				-0.3
6,323,370	+				-0.5
6,323,371	-				+2.5
6,323,371	-				-0.9
6,323,484	+		AO353_29100	0.17	+0.1
6,323,484	+		AO353_29100	0.17	+0.1
6,323,484	+		AO353_29100	0.17	+0.4
6,323,484	+		AO353_29100	0.17	-1.3
6,323,484	+		AO353_29100	0.17	-0.3
6,323,484	+		AO353_29100	0.17	+0.7
6,323,484	+		AO353_29100	0.17	+2.0
6,323,484	+		AO353_29100	0.17	-1.6
6,323,484	+		AO353_29100	0.17	+1.9
6,323,484	+		AO353_29100	0.17	-0.3
6,323,484	+		AO353_29100	0.17	+1.6
6,323,484	+		AO353_29100	0.17	+0.1
6,323,484	+		AO353_29100	0.17	+0.9
6,323,484	+		AO353_29100	0.17	-0.3
6,323,485	-		AO353_29100	0.17	-0.3
6,323,485	-		AO353_29100	0.17	+1.1
6,323,485	-		AO353_29100	0.17	+0.7
6,323,485	-		AO353_29100	0.17	-0.9
6,323,485	-		AO353_29100	0.17	-0.8
6,323,485	-		AO353_29100	0.17	+0.7
6,323,485	-		AO353_29100	0.17	-1.3
6,323,485	-		AO353_29100	0.17	-0.0
6,323,488	+		AO353_29100	0.17	-0.0
6,323,488	+		AO353_29100	0.17	-0.4
6,323,489	-		AO353_29100	0.18	-2.4
6,323,489	-		AO353_29100	0.18	+1.1
6,323,489	-		AO353_29100	0.18	-1.6
6,323,489	-		AO353_29100	0.18	+1.3
6,323,489	-		AO353_29100	0.18	-0.9
6,323,489	-		AO353_29100	0.18	+0.4
6,323,489	-		AO353_29100	0.18	-2.1
6,323,489	-		AO353_29100	0.18	+3.3
6,323,489	-		AO353_29100	0.18	-0.7
6,323,489	-		AO353_29100	0.18	+0.3
6,323,489	-		AO353_29100	0.18	+0.1
6,323,743	+		AO353_29100	0.55	+0.6
6,323,743	+		AO353_29100	0.55	-0.7
6,323,743	+		AO353_29100	0.55	+0.3
6,323,745	+		AO353_29100	0.55	-0.4
6,323,745	+		AO353_29100	0.55	+0.3
6,323,745	+		AO353_29100	0.55	+1.8
6,323,745	+		AO353_29100	0.55	-0.9
6,323,745	+		AO353_29100	0.55	-0.9
6,323,745	+		AO353_29100	0.55	-0.3
6,323,745	+		AO353_29100	0.55	-1.9
6,323,745	+		AO353_29100	0.55	+0.7
6,323,746	-		AO353_29100	0.55	+0.7
6,323,746	-		AO353_29100	0.55	-0.7
6,323,746	-		AO353_29100	0.55	+0.4
6,323,746	-		AO353_29100	0.55	+0.9
6,323,746	-		AO353_29100	0.55	+0.7
6,323,746	-		AO353_29100	0.55	-2.1
6,323,746	-		AO353_29100	0.55	-0.4
6,323,746	-		AO353_29100	0.55	-0.5
6,323,746	-		AO353_29100	0.55	-0.9
6,323,787	+		AO353_29100	0.61	+0.1
6,323,787	+		AO353_29100	0.61	-1.9
6,323,787	+		AO353_29100	0.61	-0.6
6,323,788	-		AO353_29100	0.62	-0.5
6,323,788	-		AO353_29100	0.62	-0.5
6,323,788	-		AO353_29100	0.62	+0.5
6,323,860	+		AO353_29100	0.72	-0.3
6,323,861	-		AO353_29100	0.72	+1.2
6,323,861	-		AO353_29100	0.72	-0.3
6,323,861	-		AO353_29100	0.72	+0.7
6,323,861	-		AO353_29100	0.72	-1.6
6,323,861	-		AO353_29100	0.72	+0.4
6,323,883	+		AO353_29100	0.75	-0.7
6,323,883	+		AO353_29100	0.75	+0.1
6,323,883	+		AO353_29100	0.75	-0.1
6,323,883	+		AO353_29100	0.75	-2.3
6,323,883	+		AO353_29100	0.75	+1.0
6,323,884	-		AO353_29100	0.76	-0.9
6,323,884	-		AO353_29100	0.76	-1.3
6,323,910	+		AO353_29100	0.79	+1.3
6,323,911	-		AO353_29100	0.80	-1.2
6,323,916	+		AO353_29100	0.80	-0.8
6,323,916	+		AO353_29100	0.80	-1.1
6,323,916	+		AO353_29100	0.80	-0.7
6,323,916	+		AO353_29100	0.80	+0.7
6,323,917	-		AO353_29100	0.80	+0.1
6,323,917	-		AO353_29100	0.80	+0.7
6,323,973	+		AO353_29100	0.89	-0.6
6,323,974	-		AO353_29100	0.89	-1.4
6,323,974	-		AO353_29100	0.89	+0.2
6,323,974	-		AO353_29100	0.89	-1.4
6,324,227	+		AO353_29105	0.33	+0.5
6,324,227	+		AO353_29105	0.33	+0.1
6,324,228	-		AO353_29105	0.33	+2.7
6,324,285	+		AO353_29105	0.44	-1.9
6,324,285	+		AO353_29105	0.44	+0.4
6,324,285	+		AO353_29105	0.44	+1.5
6,324,285	+		AO353_29105	0.44	+1.0
6,324,285	+		AO353_29105	0.44	+0.6
6,324,285	+		AO353_29105	0.44	+1.4
6,324,285	+		AO353_29105	0.44	-0.0
6,324,285	+		AO353_29105	0.44	+1.1
6,324,286	-		AO353_29105	0.44	+1.1
6,324,286	-		AO353_29105	0.44	+0.8
6,324,286	-		AO353_29105	0.44	-0.9
6,324,286	-		AO353_29105	0.44	-1.6
6,324,316	-		AO353_29105	0.49	+0.4
6,324,335	+		AO353_29105	0.53	+0.7
6,324,335	+		AO353_29105	0.53	+1.3
6,324,336	-		AO353_29105	0.53	-0.3
6,324,526	-		AO353_29105	0.89	+1.0
6,324,548	+				-1.0
6,324,659	+				-2.3
6,324,660	-				-0.3
6,324,679	+				-0.1
6,324,680	-				-0.0
6,324,680	-				+0.7
6,324,680	-				-0.9
6,324,686	+				+1.4
6,324,738	+				-0.5
6,324,738	+				+1.5
6,324,738	+				+0.3
6,324,786	-				-1.6
6,324,786	-				-0.0
6,324,880	+				-0.8
6,324,880	+				-1.7
6,324,880	+				-0.3
6,324,881	-				+1.5
6,324,892	+				-1.1
6,324,892	+				-0.5
6,324,892	+				+0.7
6,324,892	+				-0.1
6,324,892	+				+2.1
6,324,893	-				-0.3
6,324,893	-				-0.8
6,324,918	+				+0.5
6,324,919	-				+1.5
6,324,920	+				-2.1
6,324,920	+				+1.0
6,324,944	+				-0.7
6,324,944	+				+0.1
6,324,945	-				-0.7
6,324,945	-				-0.7
6,324,954	+				-1.3
6,324,972	+				+1.5
6,324,973	-				-1.1
6,324,973	-				+0.1
6,324,978	+				+1.4
6,324,994	+				-2.3
6,324,994	+				-0.9
6,324,995	-				-1.0
6,324,997	+				+0.3
6,324,997	+				-1.3
6,324,998	-				-0.9
6,325,000	+				-0.2
6,325,000	+				+0.7
6,325,001	-				-1.9
6,325,085	+				+1.7
6,325,085	+				-0.3
6,325,085	+				+1.5
6,325,086	-				-1.6
6,325,086	-				-0.3
6,325,086	-				+0.7
6,325,103	+				-2.4
6,325,107	-				+1.0
6,325,346	-		AO353_29110	0.20	-0.6
6,325,358	-		AO353_29110	0.20	+0.3
6,325,358	-		AO353_29110	0.20	+0.1
6,325,358	-		AO353_29110	0.20	+2.0
6,325,358	-		AO353_29110	0.20	+0.6