Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26815

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
5,872,776	+		AO353_26805	0.74	-1.4
5,872,782	-		AO353_26805	0.74	+1.2
5,872,982	-		AO353_26805	0.89	+2.2
5,872,982	-		AO353_26805	0.89	-0.4
5,872,982	-		AO353_26805	0.89	+1.8
5,872,982	-		AO353_26805	0.89	-0.2
5,873,017	+				-0.2
5,873,018	-				+0.2
5,873,141	+				+0.8
5,873,141	+				+1.9
5,873,141	+				+1.4
5,873,141	+				+0.4
5,873,142	-				-1.4
5,873,142	-				-0.1
5,873,142	-				-0.4
5,873,142	-				+1.2
5,873,142	-				-0.5
5,873,277	+		AO353_26810	0.44	-1.2
5,873,305	+		AO353_26810	0.53	+0.6
5,873,305	+		AO353_26810	0.53	+0.2
5,873,401	+		AO353_26810	0.83	+0.6
5,873,401	+		AO353_26810	0.83	+1.2
5,873,401	+		AO353_26810	0.83	-0.8
5,873,402	-		AO353_26810	0.84	-0.4
5,873,402	-		AO353_26810	0.84	+0.2
5,873,402	-				-0.9
5,873,402	-		AO353_26810	0.84	+0.1
5,873,434	+				-0.4
5,873,542	+				-0.6
5,873,542	+				-0.4
5,873,542	+				-1.7
5,873,542	+				+0.5
5,873,543	-				+0.4
5,873,543	-				-0.4
5,873,543	-				-0.4
5,873,556	-				-0.8
5,873,574	+				-1.4
5,873,580	-				-0.4
5,873,586	+				-0.6
5,873,681	-				-1.7
5,873,701	+				-0.2
5,873,702	-				-0.9
5,873,742	+				+1.2
5,873,743	-				-0.1
5,873,743	-				+0.2
5,873,743	-				-0.8
5,873,743	-				-0.9
5,873,751	+				-0.7
5,873,751	+				-1.2
5,873,751	+				-0.1
5,873,905	-		AO353_26815	0.20	-0.4
5,874,063	+		AO353_26815	0.43	-0.9
5,874,144	+		AO353_26815	0.55	-0.4
5,874,144	+		AO353_26815	0.55	-0.8
5,874,145	-		AO353_26815	0.55	-0.8
5,874,145	-		AO353_26815	0.55	-2.2
5,874,240	+		AO353_26815	0.69	-0.7
5,874,240	+		AO353_26815	0.69	-0.9
5,874,241	-		AO353_26815	0.69	+0.5
5,874,429	+				+0.9
5,874,450	+				+1.2
5,874,490	+				-1.9
5,874,491	-				-0.9
5,874,491	-				-0.2
5,874,538	+				+0.9
5,874,538	+				+2.2
5,874,538	+				+0.6
5,874,538	+				+0.1
5,874,538	+				-0.0
5,874,538	+				+1.6
5,874,538	+				-0.8
5,874,538	+				-0.9
5,874,538	+				-1.4
5,874,538	+				-0.1
5,874,539	-				+0.9
5,874,539	-				-1.7
5,874,539	-				-0.4
5,874,539	-				+1.0
5,874,539	-				-1.9
5,874,539	-				+0.1
5,874,539	-				-1.7
5,874,539	-				+2.9
5,874,539	-				-0.9
5,874,539	-				-0.9
5,874,539	-				+0.1
5,874,539	-				-1.4
5,874,539	-				+1.0
5,874,541	+				-1.4
5,874,541	+				+0.4
5,874,541	+				-0.4
5,874,542	-				+2.6
5,874,542	-				+0.9
5,874,556	+				+1.0
5,874,557	-				+0.4
5,874,682	+		AO353_26820	0.18	+2.1
5,874,989	+		AO353_26820	0.40	-3.1
5,874,990	-		AO353_26820	0.40	-1.4
5,874,990	-		AO353_26820	0.40	+0.1
5,874,990	-		AO353_26820	0.40	+0.5
5,875,397	-		AO353_26820	0.69	+1.2
5,875,397	-		AO353_26820	0.69	+2.6