Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_24955

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
5,503,435	+		AO353_24950	0.53	+0.9
5,503,517	+		AO353_24950	0.57	+1.0
5,503,517	+		AO353_24950	0.57	-1.0
5,503,518	-		AO353_24950	0.57	+0.1
5,503,566	+		AO353_24950	0.60	+1.7
5,503,566	+		AO353_24950	0.60	+0.2
5,503,567	-		AO353_24950	0.60	-0.6
5,503,567	-		AO353_24950	0.60	-0.5
5,503,567	-		AO353_24950	0.60	+1.7
5,503,567	-		AO353_24950	0.60	+0.9
5,503,567	-		AO353_24950	0.60	-1.0
5,503,567	-		AO353_24950	0.60	-1.0
5,503,663	+		AO353_24950	0.64	+2.2
5,503,663	+		AO353_24950	0.64	+2.7
5,503,663	+		AO353_24950	0.64	+0.9
5,503,663	+		AO353_24950	0.64	-1.6
5,503,663	+		AO353_24950	0.64	-0.3
5,503,664	-		AO353_24950	0.64	-2.5
5,503,664	-		AO353_24950	0.64	+0.5
5,503,664	-		AO353_24950	0.64	-2.6
5,503,783	+		AO353_24950	0.70	-2.0
5,503,784	-		AO353_24950	0.70	-1.0
5,503,784	-		AO353_24950	0.70	+1.2
5,503,816	+		AO353_24950	0.72	-0.3
5,503,817	-		AO353_24950	0.72	+1.7
5,503,840	+		AO353_24950	0.73	-1.0
5,503,841	-		AO353_24950	0.73	-0.9
5,503,903	+		AO353_24950	0.76	-1.0
5,503,904	-		AO353_24950	0.77	+1.3
5,503,904	-		AO353_24950	0.77	+1.4
5,503,904	-		AO353_24950	0.77	-0.0
5,504,035	+		AO353_24950	0.83	-0.7
5,504,036	-		AO353_24950	0.83	+1.5
5,504,069	-		AO353_24950	0.85	-1.5
5,504,069	-		AO353_24950	0.85	-2.0
5,504,296	+				-0.5
5,504,296	+				+0.2
5,504,297	-				-0.3
5,504,297	-				+1.2
5,504,297	-				-1.5
5,504,297	-				+0.1
5,504,297	-				+0.1
5,504,351	+				-0.2
5,504,351	+				+1.4
5,504,352	-				+2.3
5,504,445	+				+0.1
5,504,445	+				-2.2
5,504,445	+				+2.3
5,504,445	+				-1.0
5,504,445	+				+1.0
5,504,445	+				-0.6
5,504,445	+				-1.5
5,504,445	+				-1.5
5,504,446	-				-0.6
5,504,446	-				-1.9
5,504,446	-				-1.0
5,504,446	-				-1.8
5,504,464	+		AO353_24955	0.15	+0.5
5,504,464	+		AO353_24955	0.15	+2.1
5,504,464	+		AO353_24955	0.15	-1.5
5,504,464	+		AO353_24955	0.15	-0.3
5,504,464	+		AO353_24955	0.15	-1.3
5,504,464	+		AO353_24955	0.15	-1.0
5,504,464	+		AO353_24955	0.15	-0.4
5,504,464	+		AO353_24955	0.15	+0.5
5,504,464	+		AO353_24955	0.15	-0.3
5,504,465	-		AO353_24955	0.15	-2.3
5,504,465	-		AO353_24955	0.15	-0.7
5,504,465	-		AO353_24955	0.15	+0.9
5,504,465	-		AO353_24955	0.15	+0.9
5,504,465	-		AO353_24955	0.15	-1.0
5,504,465	-		AO353_24955	0.15	-1.8
5,504,475	+		AO353_24955	0.18	+0.5
5,504,476	-		AO353_24955	0.18	+1.1
5,504,509	+		AO353_24955	0.28	-2.0
5,504,509	+		AO353_24955	0.28	-1.8
5,504,509	+		AO353_24955	0.28	-0.2
5,504,509	+		AO353_24955	0.28	-1.5
5,504,509	+		AO353_24955	0.28	-0.6
5,504,509	+		AO353_24955	0.28	+0.0
5,504,510	-		AO353_24955	0.28	-0.5
5,504,510	-		AO353_24955	0.28	-3.2
5,504,510	-		AO353_24955	0.28	+0.8
5,504,510	-		AO353_24955	0.28	-2.4
5,504,510	-		AO353_24955	0.28	-0.5
5,504,510	-		AO353_24955	0.28	-0.8
5,504,510	-		AO353_24955	0.28	+0.5
5,504,510	-		AO353_24955	0.28	-2.5
5,504,762	-				-0.5
5,504,762	-				+0.8
5,504,786	+				-0.5
5,504,787	-				+0.2
5,504,787	-				-0.9
5,504,807	+				-1.9
5,504,807	+				+1.0
5,504,807	+				-0.1
5,504,808	-				-1.3
5,504,809	+				+1.5
5,504,809	+				-0.9
5,504,809	+				-2.2
5,504,809	+				-0.4
5,504,810	-				+1.5
5,505,051	-		AO353_24960	0.25	+0.8
5,505,061	-		AO353_24960	0.27	-0.5
5,505,090	+		AO353_24960	0.31	+0.1
5,505,090	+		AO353_24960	0.31	-1.8
5,505,091	-		AO353_24960	0.32	-1.8
5,505,091	-		AO353_24960	0.32	+0.8
5,505,091	-		AO353_24960	0.32	+0.1
5,505,091	-		AO353_24960	0.32	-1.8
5,505,091	-		AO353_24960	0.32	-1.5
5,505,091	-		AO353_24960	0.32	+0.3
5,505,091	-		AO353_24960	0.32	+0.9
5,505,185	+		AO353_24960	0.48	+1.4
5,505,244	+		AO353_24960	0.58	-1.8
5,505,244	+		AO353_24960	0.58	-1.5
5,505,244	+		AO353_24960	0.58	-0.3
5,505,244	+		AO353_24960	0.58	-0.0
5,505,245	-		AO353_24960	0.58	+2.1
5,505,245	-		AO353_24960	0.58	-0.5
5,505,249	-		AO353_24960	0.58	+0.1
5,505,249	-		AO353_24960	0.58	+0.5
5,505,429	+		AO353_24960	0.89	+0.3
5,505,430	-		AO353_24960	0.89	+0.4
5,505,528	+				+0.7
5,505,630	-				+0.7
5,505,720	+				-2.0
5,505,721	-				+0.3
5,505,721	-				+0.1