Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22970

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
5,044,234	+		AO353_22965	0.31	-0.9
5,044,234	+		AO353_22965	0.31	-0.6
5,044,234	+		AO353_22965	0.31	+1.6
5,044,234	+		AO353_22965	0.31	+0.6
5,044,234	+		AO353_22965	0.31	+0.4
5,044,235	-		AO353_22965	0.31	-1.9
5,044,235	-		AO353_22965	0.31	+0.4
5,044,235	-		AO353_22965	0.31	-0.1
5,044,247	-		AO353_22965	0.32	+0.3
5,044,253	+		AO353_22965	0.32	-0.1
5,044,282	+		AO353_22965	0.35	-0.1
5,044,283	-		AO353_22965	0.35	-0.9
5,044,283	-		AO353_22965	0.35	-0.7
5,044,582	+		AO353_22965	0.58	+0.2
5,044,582	+		AO353_22965	0.58	+0.4
5,044,582	+		AO353_22965	0.58	+0.5
5,044,582	+		AO353_22965	0.58	-2.6
5,044,583	-		AO353_22965	0.58	-2.2
5,044,583	-		AO353_22965	0.58	+0.4
5,044,583	-		AO353_22965	0.58	-0.1
5,044,583	-		AO353_22965	0.58	-2.2
5,044,583	-		AO353_22965	0.58	-0.9
5,044,583	-		AO353_22965	0.58	+0.9
5,044,583	-		AO353_22965	0.58	-1.2
5,044,583	-		AO353_22965	0.58	-1.9
5,044,622	+		AO353_22965	0.61	+1.1
5,044,623	-		AO353_22965	0.61	-0.9
5,044,623	-		AO353_22965	0.61	+0.2
5,044,630	+		AO353_22965	0.62	+0.6
5,044,630	+		AO353_22965	0.62	-0.2
5,044,630	+		AO353_22965	0.62	-2.2
5,044,630	+		AO353_22965	0.62	+1.2
5,044,631	-		AO353_22965	0.62	+1.0
5,044,631	-		AO353_22965	0.62	+0.6
5,044,631	-		AO353_22965	0.62	-0.2
5,044,631	-		AO353_22965	0.62	+0.1
5,044,862	+		AO353_22965	0.80	-0.9
5,044,862	+		AO353_22965	0.80	-1.2
5,045,116	+				+1.1
5,045,116	+				+0.2
5,045,116	+				+1.1
5,045,116	+				+0.7
5,045,117	-				+1.4
5,045,117	-				-1.9
5,045,117	-				+1.8
5,045,125	+				+0.6
5,045,125	+				-0.1
5,045,126	-				+0.3
5,045,126	-				+0.1
5,045,126	-				+0.3
5,045,170	-				+1.6
5,045,204	+				-1.7
5,045,204	+				-2.8
5,045,204	+				+0.2
5,045,204	+				+0.2
5,045,204	+				-0.2
5,045,204	+				-0.9
5,045,204	+				+0.1
5,045,204	+				+0.6
5,045,204	+				-0.1
5,045,205	-				+0.2
5,045,205	-				+0.8
5,045,205	-				-0.4
5,045,205	-				+1.0
5,045,213	+				+0.3
5,045,213	+				-0.7
5,045,213	+				+0.6
5,045,214	-				+0.2
5,045,214	-				-0.9
5,045,214	-				+0.8
5,045,214	-				-0.4
5,045,288	+		AO353_22970	0.11	+1.2
5,045,288	+		AO353_22970	0.11	+0.1
5,045,289	-		AO353_22970	0.11	+2.0
5,045,289	-		AO353_22970	0.11	+0.2
5,045,289	-		AO353_22970	0.11	-0.4
5,045,387	+		AO353_22970	0.23	-1.9
5,045,447	+		AO353_22970	0.30	-0.4
5,045,448	-		AO353_22970	0.30	+0.1
5,045,448	-		AO353_22970	0.30	-0.0
5,045,448	-		AO353_22970	0.30	-0.7
5,045,448	-		AO353_22970	0.30	-0.4
5,045,507	+		AO353_22970	0.38	+2.2
5,045,507	+		AO353_22970	0.38	-0.1
5,045,508	-		AO353_22970	0.38	-0.6
5,045,508	-		AO353_22970	0.38	-0.8
5,045,523	+		AO353_22970	0.40	-0.4
5,045,544	-		AO353_22970	0.42	-1.3
5,045,544	-		AO353_22970	0.42	-0.4
5,045,544	-		AO353_22970	0.42	+2.0
5,045,544	-		AO353_22970	0.42	-0.7
5,045,627	+		AO353_22970	0.53	-0.5
5,045,627	+		AO353_22970	0.53	+0.5
5,045,627	+		AO353_22970	0.53	+1.5
5,045,628	-		AO353_22970	0.53	-1.8
5,045,634	+		AO353_22970	0.54	+3.0
5,045,635	-		AO353_22970	0.54	+0.4
5,045,741	+		AO353_22970	0.67	-0.4
5,045,741	+		AO353_22970	0.67	+0.4
5,045,741	+		AO353_22970	0.67	-0.7
5,045,741	+		AO353_22970	0.67	-1.4
5,045,741	+		AO353_22970	0.67	+0.6
5,045,741	+		AO353_22970	0.67	+1.0
5,045,741	+		AO353_22970	0.67	-0.4
5,045,742	-		AO353_22970	0.67	+1.6
5,045,742	-		AO353_22970	0.67	+1.0
5,045,742	-		AO353_22970	0.67	-1.4
5,045,742	-		AO353_22970	0.67	-1.0
5,045,742	-		AO353_22970	0.67	-0.5
5,045,742	-		AO353_22970	0.67	-0.2
5,045,742	-		AO353_22970	0.67	+0.9
5,045,742	-		AO353_22970	0.67	+0.1
5,045,742	-		AO353_22970	0.67	-0.4
5,045,742	-		AO353_22970	0.67	+2.2
5,045,814	-		AO353_22970	0.76	-0.4
5,045,814	-		AO353_22970	0.76	-1.2
5,045,873	+		AO353_22970	0.83	-1.7
5,045,874	-		AO353_22970	0.83	-2.4
5,045,909	+		AO353_22970	0.88	-2.4
5,045,909	+		AO353_22970	0.88	-0.6
5,045,909	+		AO353_22970	0.88	+0.4
5,045,910	-		AO353_22970	0.88	-0.1
5,045,910	-		AO353_22970	0.88	-0.3
5,045,933	+				-1.4
5,045,933	+				-0.9
5,045,934	-				+1.8
5,046,025	+				-1.2
5,046,042	-				-1.4
5,046,179	+		AO353_22975	0.17	+0.0
5,046,179	+		AO353_22975	0.17	+0.9
5,046,180	-		AO353_22975	0.17	-1.0
5,046,180	-		AO353_22975	0.17	-0.0
5,046,180	-		AO353_22975	0.17	+1.8
5,046,180	-		AO353_22975	0.17	-1.3
5,046,399	+		AO353_22975	0.62	+2.6
5,046,399	+		AO353_22975	0.62	-0.6
5,046,399	+		AO353_22975	0.62	+0.3
5,046,399	+		AO353_22975	0.62	+0.6
5,046,400	-		AO353_22975	0.62	-0.1
5,046,400	-		AO353_22975	0.62	+0.0
5,046,504	+				+0.6
5,046,505	-		AO353_22975	0.83	-0.6
5,046,631	-				-0.4
5,046,631	-				+0.0
5,046,644	+				+0.2
5,046,644	+				-0.0
5,046,644	+				-1.0
5,046,644	+				-0.8
5,046,644	+				+1.6
5,046,644	+				-0.2
5,046,645	-				+0.6
5,046,645	-				-0.5
5,046,739	-				+1.0
5,046,739	-				-0.1
5,046,739	-				+0.6
5,046,739	-				+1.0
5,046,843	+		AO353_22980	0.21	+1.2
5,046,843	+		AO353_22980	0.21	-2.5
5,046,844	-		AO353_22980	0.21	+1.5
5,046,844	-		AO353_22980	0.21	-2.0
5,046,877	+				-0.4
5,046,909	+		AO353_22980	0.34	-1.3
5,046,909	+		AO353_22980	0.34	-0.0
5,046,909	+		AO353_22980	0.34	-1.0
5,046,909	+		AO353_22980	0.34	-0.0
5,046,910	-		AO353_22980	0.34	+1.2
5,046,910	-		AO353_22980	0.34	+0.9