Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20425

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
4,488,326	+				-1.2
4,488,326	+				-1.4
4,488,326	+				-1.2
4,488,326	+				+1.5
4,488,327	-				+0.5
4,488,393	+				-0.2
4,488,393	+				-2.0
4,488,394	-				-0.4
4,488,432	+				-0.0
4,488,433	-				-2.4
4,488,433	-				+1.3
4,488,448	+				-0.3
4,488,448	+				+0.4
4,488,449	-				-1.8
4,488,473	+				-0.8
4,488,474	-				+0.2
4,488,483	+				-2.2
4,488,527	+				-0.6
4,488,587	+				-2.0
4,488,587	+				-0.5
4,488,588	-				-0.9
4,488,600	+				+0.2
4,488,600	+				+1.1
4,488,600	+				-1.3
4,488,600	+				-0.5
4,488,601	-				+0.6
4,488,603	-				-2.2
4,488,603	-				-0.2
4,488,742	-		AO353_20420	0.21	+0.4
4,488,846	-		AO353_20420	0.35	-2.4
4,488,846	-		AO353_20420	0.35	-1.0
4,488,959	+		AO353_20420	0.52	-2.7
4,488,959	+		AO353_20420	0.52	+0.8
4,488,959	+		AO353_20420	0.52	-0.8
4,488,959	+		AO353_20420	0.52	+1.4
4,488,960	-		AO353_20420	0.52	-0.5
4,488,960	-		AO353_20420	0.52	-0.2
4,488,960	-		AO353_20420	0.52	-0.2
4,488,960	-		AO353_20420	0.52	-0.9
4,488,960	-		AO353_20420	0.52	-1.7
4,489,200	+		AO353_20420	0.86	+0.2
4,489,200	+		AO353_20420	0.86	+0.1
4,489,200	+		AO353_20420	0.86	-1.2
4,489,200	+		AO353_20420	0.86	-0.1
4,489,200	+		AO353_20420	0.86	-0.4
4,489,200	+		AO353_20420	0.86	-1.2
4,489,200	+		AO353_20420	0.86	-0.2
4,489,201	-		AO353_20420	0.86	+1.8
4,489,201	-		AO353_20420	0.86	+1.2
4,489,201	-		AO353_20420	0.86	+0.5
4,489,201	-		AO353_20420	0.86	-0.2
4,489,211	+		AO353_20420	0.88	-0.0
4,489,211	+		AO353_20420	0.88	+1.3
4,489,211	+		AO353_20420	0.88	+0.4
4,489,211	+		AO353_20420	0.88	-0.5
4,489,211	+		AO353_20420	0.88	+0.1
4,489,211	+		AO353_20420	0.88	+1.4
4,489,211	+		AO353_20420	0.88	+1.2
4,489,212	-		AO353_20420	0.88	+1.1
4,489,212	-		AO353_20420	0.88	+0.3
4,489,212	-		AO353_20420	0.88	-0.7
4,489,212	-		AO353_20420	0.88	-0.5
4,489,212	-		AO353_20420	0.88	+0.5
4,489,212	-		AO353_20420	0.88	+0.2
4,489,309	+				-0.2
4,489,507	+		AO353_20425	0.42	-1.2
4,489,507	+		AO353_20425	0.42	-2.7
4,489,508	-		AO353_20425	0.42	-1.2
4,489,508	-		AO353_20425	0.42	-0.5
4,489,508	-		AO353_20425	0.42	+0.8
4,489,508	-		AO353_20425	0.42	-0.0
4,489,790	+				-2.2
4,489,813	+				+0.5
4,489,813	+				-0.3
4,489,814	-				-1.4
4,489,815	+				+0.5
4,489,832	-				+0.2
4,489,832	-				-1.5
4,489,852	+				-0.5
4,489,852	+				-0.2
4,489,852	+				-0.8
4,489,852	+				-1.9
4,489,853	-				+0.1
4,489,990	+				-0.3
4,489,991	-				+1.4
4,489,991	-				+0.6
4,489,991	-				-0.4
4,489,991	-				-1.4
4,489,991	-				+2.3
4,489,991	-				+1.0
4,489,991	-				-0.7
4,490,010	+				+1.4
4,490,010	+				-0.8
4,490,010	+				+1.4
4,490,011	-				+0.1
4,490,011	-				-0.4
4,490,011	-				+0.0
4,490,011	-				-2.0
4,490,127	+		AO353_20430	0.28	+0.4
4,490,127	+		AO353_20430	0.28	+0.8
4,490,127	+		AO353_20430	0.28	-0.7
4,490,127	+		AO353_20430	0.28	-1.2
4,490,128	-		AO353_20430	0.28	-1.8
4,490,128	-		AO353_20430	0.28	+0.6
4,490,128	-		AO353_20430	0.28	+0.6
4,490,128	-		AO353_20430	0.28	+0.7
4,490,128	-		AO353_20430	0.28	+0.8
4,490,128	-		AO353_20430	0.28	-1.2
4,490,128	-		AO353_20430	0.28	+0.8
4,490,131	+		AO353_20430	0.29	-1.2
4,490,131	+		AO353_20430	0.29	-0.2
4,490,131	+		AO353_20430	0.29	+1.0
4,490,131	+		AO353_20430	0.29	+0.8
4,490,131	+		AO353_20430	0.29	+0.8
4,490,131	+		AO353_20430	0.29	-1.2
4,490,131	+		AO353_20430	0.29	-2.9
4,490,131	+		AO353_20430	0.29	+1.0
4,490,131	+		AO353_20430	0.29	-1.2
4,490,132	-		AO353_20430	0.29	+0.8
4,490,132	-		AO353_20430	0.29	+3.1
4,490,132	-		AO353_20430	0.29	-0.2
4,490,132	-		AO353_20430	0.29	-0.8
4,490,132	-		AO353_20430	0.29	-1.0
4,490,132	-		AO353_20430	0.29	+1.5
4,490,132	-		AO353_20430	0.29	+1.1
4,490,132	-		AO353_20430	0.29	-1.8
4,490,132	-		AO353_20430	0.29	-0.2
4,490,132	-		AO353_20430	0.29	-0.0
4,490,132	-		AO353_20430	0.29	+0.5
4,490,251	+		AO353_20430	0.54	-0.6
4,490,251	+		AO353_20430	0.54	-1.2
4,490,252	-		AO353_20430	0.54	+0.4
4,490,252	-		AO353_20430	0.54	+1.8
4,490,252	-		AO353_20430	0.54	+0.6
4,490,252	-		AO353_20430	0.54	-0.4
4,490,359	+		AO353_20430	0.76	+2.8
4,490,359	+		AO353_20430	0.76	-0.8
4,490,359	+		AO353_20430	0.76	+0.8
4,490,359	+		AO353_20430	0.76	+0.8
4,490,360	-		AO353_20430	0.76	-2.9
4,490,360	-		AO353_20430	0.76	-0.8
4,490,360	-		AO353_20430	0.76	-1.7
4,490,360	-		AO353_20430	0.76	-2.3
4,490,368	+		AO353_20430	0.78	+0.4
4,490,368	+		AO353_20430	0.78	+0.8
4,490,369	-		AO353_20430	0.78	-0.9
4,490,369	-		AO353_20430	0.78	+0.8
4,490,369	-		AO353_20430	0.78	-2.5
4,490,369	-		AO353_20430	0.78	-0.2
4,490,399	+		AO353_20430	0.84	+0.5
4,490,400	-		AO353_20430	0.84	-1.9
4,490,471	+				-0.2
4,490,471	+				-2.4
4,490,506	-				-0.5
4,490,524	+				+0.3
4,490,524	+				+0.8
4,490,524	+				+0.9
4,490,524	+				+1.8
4,490,524	+				+1.5
4,490,524	+				-0.5
4,490,524	+				+0.1
4,490,524	+				-0.2
4,490,524	+				+1.4
4,490,525	-				-1.7
4,490,525	-				+0.8
4,490,525	-				-0.8
4,490,525	-				+0.1
4,490,525	-				-0.2
4,490,525	-				+0.2
4,490,525	-				+0.8
4,490,701	+				-0.2
4,490,701	+				+1.2
4,490,702	-				+0.5
4,490,727	-				-0.4
4,490,727	-				-0.4
4,490,747	-				+0.3
4,490,753	-				+0.3
4,490,757	-				-0.4
4,490,767	+				+1.3
4,490,768	-				+0.9