Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20410

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
4,486,324	+		AO353_20405	0.41	-1.5
4,486,325	-		AO353_20405	0.41	+2.4
4,486,439	-		AO353_20405	0.50	+0.4
4,486,439	-		AO353_20405	0.50	+1.4
4,486,467	-		AO353_20405	0.52	-0.4
4,486,476	+		AO353_20405	0.53	-1.4
4,486,477	-		AO353_20405	0.53	-0.2
4,486,639	+		AO353_20405	0.66	-0.7
4,486,639	+		AO353_20405	0.66	-1.4
4,486,640	-		AO353_20405	0.66	-0.5
4,486,644	+		AO353_20405	0.67	+0.4
4,486,644	+		AO353_20405	0.67	-1.0
4,486,645	-		AO353_20405	0.67	+1.6
4,486,695	+		AO353_20405	0.71	+2.7
4,486,695	+		AO353_20405	0.71	-0.2
4,486,695	+		AO353_20405	0.71	+0.8
4,486,695	+		AO353_20405	0.71	-0.7
4,486,695	+		AO353_20405	0.71	+1.2
4,486,695	+		AO353_20405	0.71	-0.8
4,486,695	+		AO353_20405	0.71	+0.1
4,486,695	+		AO353_20405	0.71	-0.2
4,486,695	+		AO353_20405	0.71	-2.0
4,486,695	+		AO353_20405	0.71	+0.5
4,486,695	+		AO353_20405	0.71	-2.0
4,486,695	+		AO353_20405	0.71	+1.5
4,486,695	+		AO353_20405	0.71	-0.0
4,486,695	+		AO353_20405	0.71	+0.6
4,486,695	+		AO353_20405	0.71	+0.8
4,486,695	+		AO353_20405	0.71	-0.8
4,486,696	-		AO353_20405	0.71	-0.8
4,486,696	-		AO353_20405	0.71	-0.5
4,486,696	-		AO353_20405	0.71	+1.8
4,486,696	-		AO353_20405	0.71	+0.1
4,486,696	-		AO353_20405	0.71	+3.1
4,486,696	-		AO353_20405	0.71	+0.2
4,486,696	-		AO353_20405	0.71	-0.7
4,486,696	-		AO353_20405	0.71	+1.9
4,486,696	-		AO353_20405	0.71	-1.2
4,486,696	-		AO353_20405	0.71	-0.2
4,486,729	-		AO353_20405	0.73	-0.3
4,486,756	+		AO353_20405	0.75	+0.3
4,486,817	+		AO353_20405	0.80	-2.2
4,486,818	-		AO353_20405	0.80	+0.8
4,487,062	+				+1.8
4,487,062	+				-3.0
4,487,062	+				-0.4
4,487,062	+				+0.4
4,487,063	-				-0.1
4,487,063	-				-0.2
4,487,063	-				-3.4
4,487,063	-				-1.2
4,487,063	-				-1.2
4,487,063	-				-0.2
4,487,063	-				-0.5
4,487,063	-				+0.2
4,487,063	-				+0.8
4,487,063	-				-1.8
4,487,063	-				+1.2
4,487,075	+				+1.0
4,487,075	+				-1.0
4,487,076	-				+0.6
4,487,076	-				-0.8
4,487,076	-				-1.4
4,487,084	+				+0.4
4,487,085	-				-0.0
4,487,085	-				+0.8
4,487,085	-				+0.8
4,487,085	-				-0.8
4,487,085	-				+1.8
4,487,125	+				-1.5
4,487,125	+				+0.2
4,487,126	-				+1.5
4,487,223	+				-1.4
4,487,223	+				-0.2
4,487,224	-				+0.2
4,487,224	-				+1.4
4,487,224	-				-1.5
4,487,224	-				-0.8
4,487,224	-				-0.7
4,487,274	+				-0.2
4,487,275	-				-1.8
4,487,300	+				-0.2
4,487,300	+				-0.2
4,487,301	-				+1.0
4,487,301	-				+1.5
4,487,301	-				-0.2
4,487,301	-				+0.6
4,487,308	-				-1.6
4,487,453	+		AO353_20410	0.43	+1.4
4,487,460	+		AO353_20410	0.46	-1.4
4,487,460	+		AO353_20410	0.46	+0.8
4,487,534	+		AO353_20410	0.70	-0.8
4,487,535	-		AO353_20410	0.71	-1.0
4,487,667	+				+0.1
4,487,667	+				+1.2
4,487,668	-				-0.6
4,487,668	-				+0.5
4,487,668	-				+0.1
4,487,737	+		AO353_20415	0.30	+1.2
4,487,737	+		AO353_20415	0.30	+0.1
4,487,737	+		AO353_20415	0.30	-0.2
4,487,737	+		AO353_20415	0.30	+0.8
4,487,737	+		AO353_20415	0.30	+0.6
4,487,737	+		AO353_20415	0.30	+0.8
4,487,738	-		AO353_20415	0.31	+0.2
4,487,738	-		AO353_20415	0.31	+1.1
4,487,738	-		AO353_20415	0.31	-1.2
4,487,738	-		AO353_20415	0.31	-0.4
4,487,738	-		AO353_20415	0.31	-0.2
4,487,738	-		AO353_20415	0.31	-1.8
4,487,738	-		AO353_20415	0.31	-1.2
4,487,738	-		AO353_20415	0.31	-0.0
4,487,916	+				-3.4
4,487,916	+				-1.4
4,487,916	+				-1.2
4,487,917	-				-1.2
4,487,973	-				+0.3
4,488,067	+				+0.6
4,488,067	+				+1.2
4,488,068	-				+0.4
4,488,068	-				-0.2
4,488,068	-				+3.6
4,488,139	+				+2.3
4,488,140	-				+1.5
4,488,140	-				-0.6
4,488,140	-				+1.2
4,488,161	+				-2.0
4,488,162	-				+0.8
4,488,162	-				-1.2
4,488,162	-				-0.3
4,488,162	-				-0.2
4,488,162	-				+2.2
4,488,165	+				-1.5
4,488,166	-				-0.4
4,488,166	-				+2.1
4,488,166	-				+0.8
4,488,166	-				+0.5
4,488,166	-				-0.0
4,488,166	-				+3.1
4,488,208	-				-0.8
4,488,208	-				-0.7
4,488,326	+				-1.2
4,488,326	+				-1.4
4,488,326	+				-1.2
4,488,326	+				+1.5
4,488,327	-				+0.5
4,488,393	+				-0.2
4,488,393	+				-2.0
4,488,394	-				-0.4
4,488,432	+				-0.0
4,488,433	-				-2.4
4,488,433	-				+1.3
4,488,448	+				-0.3
4,488,448	+				+0.4
4,488,449	-				-1.8
4,488,473	+				-0.8
4,488,474	-				+0.2
4,488,483	+				-2.2
4,488,527	+				-0.6
4,488,587	+				-2.0
4,488,587	+				-0.5
4,488,588	-				-0.9
4,488,600	+				+0.2
4,488,600	+				+1.1
4,488,600	+				-1.3
4,488,600	+				-0.5
4,488,601	-				+0.6
4,488,603	-				-2.2
4,488,603	-				-0.2