Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18555

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
4,081,926	+		AO353_18550	0.88	+0.8
4,081,926	+		AO353_18550	0.88	-0.1
4,081,927	-		AO353_18550	0.89	+1.3
4,081,941	+				-2.4
4,081,941	+				-0.3
4,081,941	+				-0.6
4,081,942	-				-0.1
4,081,957	+				-1.2
4,081,957	+				+1.3
4,081,958	-				-0.2
4,081,958	-				-0.7
4,081,958	-				+0.6
4,081,963	+				+1.5
4,081,963	+				+0.3
4,081,964	-				-1.4
4,081,964	-				+1.5
4,081,964	-				+0.3
4,081,964	-				+0.6
4,081,964	-				-0.7
4,082,000	+				+1.1
4,082,001	-				-0.1
4,082,001	-				-0.7
4,082,001	-				+1.7
4,082,001	-				+0.3
4,082,001	-				+0.3
4,082,030	+				+1.0
4,082,030	+				+1.3
4,082,030	+				+1.3
4,082,030	+				+0.4
4,082,030	+				+0.4
4,082,030	+				+1.5
4,082,031	-				-0.1
4,082,031	-				+0.3
4,082,031	-				+2.5
4,082,031	-				-0.1
4,082,031	-				+0.9
4,082,071	-				+1.9
4,082,071	-				-1.0
4,082,071	-				+0.9
4,082,078	+				+0.2
4,082,078	+				-0.5
4,082,160	-				+0.6
4,082,250	+				-1.0
4,082,251	-				-0.1
4,082,276	+				-1.3
4,082,326	-				-0.4
4,082,326	-				+0.9
4,082,356	+				-1.1
4,082,356	+				+1.4
4,082,357	-				-0.7
4,082,357	-				-1.7
4,082,635	+				+0.2
4,082,635	+				+0.7
4,082,635	+				-0.1
4,082,635	+				+1.2
4,082,635	+				+1.2
4,082,635	+				+0.1
4,082,636	-				+0.3
4,082,653	-				-3.7
4,082,671	+				+0.8
4,082,672	-				-3.2
4,082,672	-				-1.1
4,082,672	-				-1.9
4,082,672	-				-2.1
4,082,703	+				+0.9
4,082,703	+				+0.6
4,082,704	-				-0.7
4,082,704	-				-1.5
4,082,704	-				-1.4
4,082,704	-				-1.7
4,082,704	-				-0.3
4,082,749	+				-1.4
4,082,750	-				-1.7
4,082,750	-				-1.9
4,082,750	-				+0.2
4,082,866	-				+1.9
4,082,866	-				-1.7
4,082,866	-				-1.8
4,082,918	+				-1.1
4,082,918	+				-1.9
4,082,918	+				-2.8
4,082,919	-				-0.4
4,082,919	-				-0.7
4,082,948	+				+1.3
4,082,949	-				+0.9
4,082,949	-				-0.7
4,083,147	+		AO353_18555	0.18	-0.5
4,083,147	+		AO353_18555	0.18	-3.5
4,083,147	+		AO353_18555	0.18	-2.5
4,083,147	+		AO353_18555	0.18	-0.6
4,083,148	-		AO353_18555	0.18	-2.7
4,083,148	-		AO353_18555	0.18	-2.5
4,083,198	+		AO353_18555	0.22	-1.1
4,083,198	+		AO353_18555	0.22	-0.9
4,083,198	+		AO353_18555	0.22	-1.9
4,083,198	+		AO353_18555	0.22	-1.9
4,083,198	+		AO353_18555	0.22	-0.3
4,083,198	+		AO353_18555	0.22	-0.8
4,083,199	-		AO353_18555	0.22	-0.1
4,083,199	-		AO353_18555	0.22	-2.5
4,083,240	+		AO353_18555	0.24	-1.7
4,083,240	+		AO353_18555	0.24	-0.9
4,083,240	+		AO353_18555	0.24	-0.1
4,083,240	+		AO353_18555	0.24	+0.2
4,083,240	+		AO353_18555	0.24	-0.1
4,083,241	-		AO353_18555	0.25	-1.7
4,083,241	-		AO353_18555	0.25	-1.1
4,083,241	-		AO353_18555	0.25	-2.1
4,083,250	-		AO353_18555	0.25	-1.7
4,083,250	-		AO353_18555	0.25	-1.4
4,083,408	+		AO353_18555	0.36	-0.7
4,083,408	+		AO353_18555	0.36	-1.1
4,083,408	+		AO353_18555	0.36	-2.7
4,083,408	+		AO353_18555	0.36	-0.9
4,083,409	-		AO353_18555	0.36	-1.3
4,083,409	-		AO353_18555	0.36	-0.1
4,083,409	-		AO353_18555	0.36	-0.9
4,083,409	-		AO353_18555	0.36	+0.3
4,083,409	-		AO353_18555	0.36	-2.5
4,083,409	-		AO353_18555	0.36	-0.1
4,083,606	-		AO353_18555	0.50	-0.1
4,083,618	+		AO353_18555	0.51	-2.1
4,083,618	+		AO353_18555	0.51	-1.9
4,083,618	+		AO353_18555	0.51	-2.4
4,083,619	-		AO353_18555	0.51	-1.7
4,083,637	-		AO353_18555	0.52	-1.8
4,083,717	+		AO353_18555	0.58	-0.4
4,083,717	+		AO353_18555	0.58	-1.1
4,083,717	+		AO353_18555	0.58	-1.9
4,083,717	+		AO353_18555	0.58	-1.9
4,083,717	+		AO353_18555	0.58	-2.0
4,083,717	+		AO353_18555	0.58	-1.4
4,083,717	+		AO353_18555	0.58	-2.5
4,083,717	+		AO353_18555	0.58	-1.1
4,083,718	-		AO353_18555	0.58	-1.2
4,083,718	-		AO353_18555	0.58	-0.9
4,083,718	-		AO353_18555	0.58	-1.8
4,083,718	-		AO353_18555	0.58	-0.3
4,083,718	-		AO353_18555	0.58	-1.1
4,083,718	-		AO353_18555	0.58	-2.2
4,083,718	-		AO353_18555	0.58	-1.1
4,083,718	-		AO353_18555	0.58	-1.4
4,083,719	+		AO353_18555	0.58	-2.5
4,083,720	-		AO353_18555	0.58	-1.9
4,083,720	-		AO353_18555	0.58	-3.9
4,083,720	-		AO353_18555	0.58	-3.2
4,083,816	+		AO353_18555	0.65	+0.3
4,083,816	+		AO353_18555	0.65	-1.9
4,083,817	-		AO353_18555	0.65	-2.2
4,083,817	-		AO353_18555	0.65	-0.9
4,083,817	-		AO353_18555	0.65	-0.7
4,083,831	+		AO353_18555	0.66	-1.1
4,083,831	+		AO353_18555	0.66	-1.5
4,083,831	+		AO353_18555	0.66	-1.4
4,083,831	+		AO353_18555	0.66	-1.4
4,083,832	-		AO353_18555	0.66	-1.7
4,083,832	-		AO353_18555	0.66	-1.7
4,083,832	-		AO353_18555	0.66	-0.1
4,083,832	-		AO353_18555	0.66	-2.9
4,083,972	+		AO353_18555	0.76	-2.7
4,083,972	+		AO353_18555	0.76	-0.1
4,083,972	+		AO353_18555	0.76	-1.0
4,083,972	+		AO353_18555	0.76	-0.2
4,083,972	+		AO353_18555	0.76	-1.4
4,083,973	-		AO353_18555	0.76	-1.2
4,083,973	-		AO353_18555	0.76	-1.7
4,083,973	-		AO353_18555	0.76	-2.1
4,083,973	-		AO353_18555	0.76	-1.7
4,083,973	-		AO353_18555	0.76	-1.9
4,083,973	-		AO353_18555	0.76	-0.8
4,083,973	-		AO353_18555	0.76	-2.8
4,083,973	-		AO353_18555	0.76	-0.7
4,083,973	-		AO353_18555	0.76	-1.7
4,083,973	-		AO353_18555	0.76	-2.2
4,083,973	-		AO353_18555	0.76	-2.0
4,084,053	+		AO353_18555	0.82	-2.4
4,084,053	+		AO353_18555	0.82	-2.1
4,084,053	+		AO353_18555	0.82	-0.5
4,084,054	-		AO353_18555	0.82	-1.4
4,084,137	+		AO353_18555	0.88	-0.4
4,084,137	+		AO353_18555	0.88	-0.7
4,084,137	+		AO353_18555	0.88	-0.1
4,084,137	+		AO353_18555	0.88	-2.7
4,084,137	+		AO353_18555	0.88	-2.2
4,084,137	+		AO353_18555	0.88	-1.9
4,084,137	+		AO353_18555	0.88	-2.2
4,084,137	+		AO353_18555	0.88	-3.5
4,084,137	+		AO353_18555	0.88	-2.0
4,084,138	-		AO353_18555	0.88	+0.9
4,084,138	-		AO353_18555	0.88	-3.7
4,084,138	-		AO353_18555	0.88	-1.6
4,084,138	-		AO353_18555	0.88	-0.7
4,084,138	-		AO353_18555	0.88	-0.1
4,084,138	-		AO353_18555	0.88	-0.7
4,084,138	-		AO353_18555	0.88	-0.7
4,084,138	-		AO353_18555	0.88	-1.1
4,084,138	-		AO353_18555	0.88	-1.1
4,084,163	+				-1.4
4,084,163	+		AO353_18555	0.89	-1.1
4,084,248	+				-2.7
4,084,248	+				-1.9
4,084,248	+				-1.7
4,084,249	-				-1.1
4,084,249	-				-1.4
4,084,249	-				+0.9
4,084,311	+				-0.2
4,084,311	+				+0.9
4,084,312	-				+0.3
4,084,373	+				-1.3
4,084,373	+				-0.5
4,084,374	-				-0.4
4,084,374	-				-0.1
4,084,374	-				-0.1
4,084,374	-				+0.2
4,084,400	-				-0.1
4,084,438	+				-2.2
4,084,611	+		AO353_18560	0.37	-0.3
4,084,611	+		AO353_18560	0.37	-0.3
4,084,611	+		AO353_18560	0.37	+1.5
4,084,611	+		AO353_18560	0.37	+0.4
4,084,870	-				-1.2
4,084,870	-				-1.8
4,084,870	-				-1.5
4,084,870	-				+0.7
4,084,893	+				+1.3
4,084,894	-				+0.5
4,084,917	+				-2.2
4,084,917	+				-1.4
4,084,917	+				+0.8
4,084,917	+				-0.1
4,084,918	-				+1.2
4,084,918	-				+0.9
4,084,918	-				+1.2