Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17650

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,889,740	+		AO353_17645	0.37	+1.8
3,889,740	+		AO353_17645	0.37	+0.0
3,889,740	+		AO353_17645	0.37	-0.3
3,889,741	-		AO353_17645	0.37	-1.0
3,889,741	-		AO353_17645	0.37	-0.5
3,889,741	-		AO353_17645	0.37	-1.4
3,889,741	-		AO353_17645	0.37	-0.2
3,889,741	-		AO353_17645	0.37	+0.3
3,889,741	-		AO353_17645	0.37	-0.3
3,889,810	+		AO353_17645	0.42	+0.7
3,889,810	+		AO353_17645	0.42	-2.0
3,889,811	-		AO353_17645	0.42	-0.5
3,889,816	-		AO353_17645	0.43	-1.4
3,889,816	-		AO353_17645	0.43	-0.1
3,889,816	-		AO353_17645	0.43	+2.3
3,889,843	+		AO353_17645	0.44	+1.8
3,889,843	+		AO353_17645	0.44	+2.0
3,889,843	+		AO353_17645	0.44	+0.2
3,889,843	+		AO353_17645	0.44	+1.3
3,889,844	-		AO353_17645	0.44	-1.0
3,889,844	-		AO353_17645	0.44	+2.5
3,889,844	-		AO353_17645	0.44	-0.5
3,889,844	-		AO353_17645	0.44	-0.3
3,889,844	-		AO353_17645	0.44	-2.0
3,890,046	-		AO353_17645	0.59	-0.7
3,890,201	+		AO353_17645	0.69	+1.3
3,890,201	+		AO353_17645	0.69	+1.8
3,890,201	+		AO353_17645	0.69	-0.4
3,890,202	-		AO353_17645	0.69	-1.0
3,890,202	-		AO353_17645	0.69	+0.0
3,890,278	+		AO353_17645	0.75	-2.4
3,890,278	+		AO353_17645	0.75	+0.7
3,890,278	+		AO353_17645	0.75	+0.8
3,890,278	+		AO353_17645	0.75	+1.0
3,890,423	+		AO353_17645	0.85	+1.0
3,890,423	+		AO353_17645	0.85	-2.3
3,890,423	+		AO353_17645	0.85	-1.0
3,890,424	-		AO353_17645	0.85	-1.3
3,890,425	+		AO353_17645	0.85	+1.8
3,890,425	+		AO353_17645	0.85	+0.5
3,890,425	+		AO353_17645	0.85	-0.5
3,890,425	+		AO353_17645	0.85	+1.4
3,890,426	-		AO353_17645	0.85	-0.3
3,890,426	-		AO353_17645	0.85	+0.3
3,890,426	-		AO353_17645	0.85	+0.5
3,890,426	-		AO353_17645	0.85	-0.9
3,890,443	+		AO353_17645	0.86	+0.8
3,890,443	+		AO353_17645	0.86	+0.0
3,890,443	+		AO353_17645	0.86	+0.9
3,890,443	+		AO353_17645	0.86	+2.4
3,890,443	+		AO353_17645	0.86	+3.0
3,890,444	-		AO353_17645	0.86	-2.1
3,890,518	+				+2.0
3,890,519	-				+0.0
3,890,519	-				+0.0
3,890,519	-				-1.3
3,890,667	+				+2.0
3,890,667	+				+0.3
3,890,667	+				+0.5
3,890,667	+				+0.6
3,890,667	+				+1.9
3,890,668	-				+0.4
3,890,668	-				-0.3
3,890,668	-				+0.6
3,890,668	-				-2.5
3,890,668	-				-1.3
3,890,699	+				+1.0
3,890,699	+				+3.2
3,890,699	+				-1.0
3,890,700	-				+0.9
3,890,700	-				-1.7
3,890,700	-				+0.6
3,890,700	-				-0.5
3,890,700	-				-0.4
3,890,704	+				+1.9
3,890,704	+				-0.2
3,890,704	+				-0.4
3,890,704	+				+0.5
3,890,705	-				-0.4
3,890,705	-				+0.9
3,890,751	-				+0.7
3,890,751	-				+0.5
3,890,751	-				+2.0
3,890,916	+		AO353_17650	0.75	+1.2
3,890,916	+		AO353_17650	0.75	+2.2
3,890,916	+		AO353_17650	0.75	+3.0
3,890,916	+		AO353_17650	0.75	+3.0
3,890,916	+		AO353_17650	0.75	-1.3
3,890,916	+		AO353_17650	0.75	+1.7
3,890,916	+		AO353_17650	0.75	+1.5
3,890,916	+		AO353_17650	0.75	+1.5
3,890,917	-		AO353_17650	0.75	-0.2
3,890,917	-		AO353_17650	0.75	-0.7
3,890,917	-		AO353_17650	0.75	+1.0
3,890,917	-		AO353_17650	0.75	-1.6
3,890,917	-		AO353_17650	0.75	+1.8
3,890,917	-		AO353_17650	0.75	-1.5
3,890,917	-		AO353_17650	0.75	-1.5
3,890,917	-		AO353_17650	0.75	-1.8
3,890,917	-		AO353_17650	0.75	+1.5
3,891,003	+				-0.1
3,891,021	+				-2.0
3,891,041	+				+1.0
3,891,041	+				-1.1
3,891,041	+				+0.0
3,891,042	-				-0.7
3,891,042	-				-0.5
3,891,042	-				-0.5
3,891,042	-				-0.8
3,891,076	-				+0.5
3,891,087	+				+1.3
3,891,087	+				-1.0
3,891,088	-				-1.5
3,891,155	+		AO353_17655	0.14	+0.7
3,891,156	-		AO353_17655	0.14	-0.2
3,891,156	-		AO353_17655	0.14	-0.9
3,891,179	-		AO353_17655	0.16	+1.2
3,891,255	+		AO353_17655	0.23	+1.0
3,891,255	+		AO353_17655	0.23	-1.4
3,891,255	+		AO353_17655	0.23	+0.5
3,891,256	-		AO353_17655	0.23	+0.7
3,891,256	-		AO353_17655	0.23	+0.5
3,891,256	-		AO353_17655	0.23	-2.5
3,891,256	-		AO353_17655	0.23	-1.8
3,891,256	-		AO353_17655	0.23	+0.6
3,891,256	-		AO353_17655	0.23	+0.2
3,891,500	+		AO353_17655	0.46	-0.2
3,891,500	+		AO353_17655	0.46	-1.9
3,891,500	+		AO353_17655	0.46	-2.0
3,891,500	+		AO353_17655	0.46	-2.0
3,891,500	+		AO353_17655	0.46	-2.0
3,891,501	-		AO353_17655	0.46	+0.4
3,891,501	-		AO353_17655	0.46	-1.3
3,891,501	-		AO353_17655	0.46	-1.0
3,891,501	-		AO353_17655	0.46	+0.2
3,891,501	-		AO353_17655	0.46	-0.5
3,891,501	-		AO353_17655	0.46	-0.1
3,891,501	-		AO353_17655	0.46	+1.6
3,891,501	-		AO353_17655	0.46	+1.2
3,891,575	+		AO353_17655	0.53	+1.0
3,891,575	+		AO353_17655	0.53	+0.2
3,891,576	-		AO353_17655	0.53	-1.8
3,891,641	+		AO353_17655	0.59	-1.5
3,891,641	+		AO353_17655	0.59	+0.0
3,891,641	+		AO353_17655	0.59	+1.8
3,891,641	+		AO353_17655	0.59	-0.4
3,891,641	+		AO353_17655	0.59	+0.5
3,891,641	+		AO353_17655	0.59	+0.2
3,891,641	+		AO353_17655	0.59	-1.8
3,891,642	-		AO353_17655	0.59	-0.8
3,891,642	-		AO353_17655	0.59	-0.3
3,891,642	-		AO353_17655	0.59	-1.7
3,891,689	+		AO353_17655	0.64	+1.0
3,891,689	+		AO353_17655	0.64	-0.4
3,891,689	+		AO353_17655	0.64	+1.0
3,891,689	+		AO353_17655	0.64	-0.5
3,891,689	+		AO353_17655	0.64	+0.5
3,891,690	-		AO353_17655	0.64	-2.4
3,891,690	-		AO353_17655	0.64	-2.3
3,891,719	+		AO353_17655	0.66	-0.3
3,891,719	+		AO353_17655	0.66	+0.5
3,891,719	+		AO353_17655	0.66	-0.2
3,891,719	+		AO353_17655	0.66	-1.5
3,891,719	+		AO353_17655	0.66	-0.4
3,891,719	+		AO353_17655	0.66	-3.5
3,891,720	-		AO353_17655	0.66	-1.8
3,891,720	-		AO353_17655	0.66	-1.3
3,891,720	-		AO353_17655	0.66	+0.7
3,891,768	-		AO353_17655	0.71	+0.5
3,891,845	+		AO353_17655	0.78	-0.5
3,891,845	+		AO353_17655	0.78	-2.0
3,891,845	+		AO353_17655	0.78	-1.1
3,891,845	+		AO353_17655	0.78	-1.8
3,891,845	+		AO353_17655	0.78	-1.2
3,891,846	-		AO353_17655	0.78	+0.5
3,891,861	-		AO353_17655	0.80	-1.8
3,891,861	-		AO353_17655	0.80	-0.5