Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17550

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,868,946	+				+0.5
3,868,946	+				+0.7
3,868,947	-				+0.0
3,868,951	+				-0.5
3,868,951	+				+0.0
3,868,952	-				-0.5
3,868,952	-				-0.8
3,868,952	-				+0.9
3,868,952	-				-0.2
3,868,953	+				-1.0
3,868,953	+				+0.3
3,868,954	-				+0.6
3,868,954	-				-1.8
3,869,065	+		AO353_17540	0.56	-0.4
3,869,066	-		AO353_17540	0.56	+0.5
3,869,066	-		AO353_17540	0.56	+0.3
3,869,066	-		AO353_17540	0.56	-0.5
3,869,066	-		AO353_17540	0.56	+0.0
3,869,066	-		AO353_17540	0.56	+0.0
3,869,150	+				+0.6
3,869,150	+				+0.0
3,869,150	+				-0.7
3,869,150	+				+0.5
3,869,151	-				+1.0
3,869,151	-				+0.2
3,869,151	-				+0.6
3,869,151	-				-1.6
3,869,151	-				-0.3
3,869,213	+				-2.1
3,869,213	+				-0.4
3,869,213	+				-2.0
3,869,213	+				-0.3
3,869,213	+				-0.3
3,869,213	+				+1.0
3,869,213	+				-0.7
3,869,213	+				+1.1
3,869,214	-				+0.4
3,869,314	+				-0.3
3,869,314	+				-0.6
3,869,314	+				+0.2
3,869,314	+				-0.8
3,869,315	-				-1.9
3,869,315	-				-1.9
3,869,399	+				-0.5
3,869,399	+				-1.9
3,869,399	+				+0.1
3,869,399	+				-0.5
3,869,399	+				-1.3
3,869,400	-				+0.1
3,869,400	-				+0.1
3,869,453	+		AO353_17545	0.23	+1.6
3,869,453	+		AO353_17545	0.23	-1.5
3,869,456	+		AO353_17545	0.24	+0.9
3,869,456	+		AO353_17545	0.24	-0.2
3,869,471	+		AO353_17545	0.30	-1.9
3,869,475	-		AO353_17545	0.31	+0.3
3,869,489	+		AO353_17545	0.37	+0.1
3,869,489	+		AO353_17545	0.37	-0.2
3,869,489	+		AO353_17545	0.37	-0.4
3,869,489	+		AO353_17545	0.37	+0.5
3,869,489	+		AO353_17545	0.37	-0.5
3,869,490	-		AO353_17545	0.37	-0.4
3,869,490	-		AO353_17545	0.37	+1.5
3,869,508	-		AO353_17545	0.44	+0.1
3,869,508	-		AO353_17545	0.44	-0.8
3,869,508	-		AO353_17545	0.44	+2.4
3,869,508	-		AO353_17545	0.44	-0.9
3,869,508	-		AO353_17545	0.44	-0.9
3,869,508	-		AO353_17545	0.44	-0.5
3,869,508	-		AO353_17545	0.44	-0.9
3,869,508	-		AO353_17545	0.44	-1.0
3,869,508	-		AO353_17545	0.44	-0.6
3,869,511	-		AO353_17545	0.46	+0.6
3,869,511	-		AO353_17545	0.46	+0.1
3,869,514	-		AO353_17545	0.47	-0.9
3,869,522	+		AO353_17545	0.50	+0.1
3,869,523	-		AO353_17545	0.50	-0.1
3,869,525	+		AO353_17545	0.51	+1.4
3,869,525	+		AO353_17545	0.51	-0.1
3,869,525	+		AO353_17545	0.51	-0.3
3,869,525	+		AO353_17545	0.51	-1.1
3,869,526	-		AO353_17545	0.52	+0.6
3,869,526	-		AO353_17545	0.52	+0.5
3,869,526	-		AO353_17545	0.52	-2.1
3,869,526	-		AO353_17545	0.52	-0.8
3,869,528	+		AO353_17545	0.52	+2.1
3,869,528	+		AO353_17545	0.52	-0.5
3,869,529	-		AO353_17545	0.53	-0.3
3,869,529	-		AO353_17545	0.53	+1.2
3,869,529	-		AO353_17545	0.53	+0.4
3,869,529	-		AO353_17545	0.53	+0.5
3,869,537	+		AO353_17545	0.56	-1.3
3,869,537	+		AO353_17545	0.56	+1.1
3,869,537	+		AO353_17545	0.56	-0.4
3,869,537	+		AO353_17545	0.56	-1.9
3,869,537	+		AO353_17545	0.56	+0.9
3,869,538	-		AO353_17545	0.56	+0.8
3,869,538	-		AO353_17545	0.56	-0.8
3,869,538	-		AO353_17545	0.56	+0.2
3,869,538	-		AO353_17545	0.56	-0.8
3,869,538	-		AO353_17545	0.56	+0.3
3,869,538	-		AO353_17545	0.56	+1.8
3,869,538	-		AO353_17545	0.56	-0.9
3,869,540	+		AO353_17545	0.57	+0.2
3,869,540	+		AO353_17545	0.57	-0.6
3,869,540	+		AO353_17545	0.57	-0.9
3,869,540	+		AO353_17545	0.57	+0.7
3,869,540	+		AO353_17545	0.57	+0.5
3,869,540	+		AO353_17545	0.57	+0.6
3,869,540	+		AO353_17545	0.57	-0.8
3,869,540	+		AO353_17545	0.57	+1.1
3,869,540	+		AO353_17545	0.57	+1.1
3,869,541	-		AO353_17545	0.58	+2.1
3,869,541	-		AO353_17545	0.58	+0.1
3,869,541	-		AO353_17545	0.58	-0.1
3,869,541	-		AO353_17545	0.58	-0.3
3,869,541	-		AO353_17545	0.58	-0.2
3,869,541	-		AO353_17545	0.58	-0.2
3,869,541	-		AO353_17545	0.58	+1.1
3,869,541	-		AO353_17545	0.58	-0.9
3,869,541	-		AO353_17545	0.58	-0.4
3,869,541	-		AO353_17545	0.58	-0.5
3,869,541	-		AO353_17545	0.58	-0.9
3,869,541	-		AO353_17545	0.58	+0.3
3,869,541	-		AO353_17545	0.58	+1.6
3,869,541	-		AO353_17545	0.58	-0.4
3,869,541	-		AO353_17545	0.58	-1.2
3,869,543	+		AO353_17545	0.58	-0.5
3,869,543	+		AO353_17545	0.58	-0.7
3,869,543	+		AO353_17545	0.58	-0.8
3,869,543	+		AO353_17545	0.58	-0.4
3,869,543	+		AO353_17545	0.58	-1.4
3,869,544	-		AO353_17545	0.59	-0.5
3,869,552	+		AO353_17545	0.62	+2.1
3,869,553	-		AO353_17545	0.62	+0.4
3,869,555	+		AO353_17545	0.63	-0.9
3,869,555	+		AO353_17545	0.63	+0.1
3,869,555	+		AO353_17545	0.63	-1.8
3,869,555	+		AO353_17545	0.63	-1.3
3,869,555	+		AO353_17545	0.63	-0.4
3,869,555	+		AO353_17545	0.63	-2.1
3,869,555	+		AO353_17545	0.63	-1.9
3,869,555	+		AO353_17545	0.63	-1.8
3,869,555	+		AO353_17545	0.63	+0.2
3,869,555	+		AO353_17545	0.63	-0.9
3,869,555	+		AO353_17545	0.63	+0.0
3,869,556	-		AO353_17545	0.63	-0.4
3,869,556	-		AO353_17545	0.63	-0.0
3,869,556	-		AO353_17545	0.63	-0.7
3,869,556	-		AO353_17545	0.63	-0.3
3,869,556	-		AO353_17545	0.63	-1.3
3,869,556	-		AO353_17545	0.63	+0.5
3,869,556	-		AO353_17545	0.63	+0.8
3,869,556	-		AO353_17545	0.63	-0.9
3,869,556	-		AO353_17545	0.63	-0.6
3,869,556	-		AO353_17545	0.63	-1.8
3,869,558	+		AO353_17545	0.64	-0.4
3,869,558	+		AO353_17545	0.64	+0.1
3,869,558	+		AO353_17545	0.64	+1.1
3,869,558	+		AO353_17545	0.64	+1.1
3,869,559	-				-0.5
3,869,591	+		AO353_17545	0.77	+0.1
3,869,591	+		AO353_17545	0.77	-0.6
3,869,592	-		AO353_17545	0.78	+1.1
3,869,592	-		AO353_17545	0.78	-0.6
3,869,592	-		AO353_17545	0.78	-1.3
3,869,594	+		AO353_17545	0.79	+0.1
3,869,594	+		AO353_17545	0.79	-0.7
3,869,594	+		AO353_17545	0.79	-1.9
3,869,594	+		AO353_17545	0.79	+0.1
3,869,595	-		AO353_17545	0.79	-1.9
3,869,595	-		AO353_17545	0.79	-0.9
3,869,655	+				-0.6
3,869,655	+				-0.4
3,869,656	-				-0.8
3,869,767	-				-0.3
3,869,774	+				+0.2
3,869,774	+				-0.3
3,869,775	-				+0.6
3,869,776	+				+0.3
3,869,776	+				-0.3
3,869,776	+				-0.3
3,869,777	-				-0.2
3,869,777	-				+1.9
3,869,787	-				+0.7
3,869,866	+				-2.0
3,869,866	+				+0.0
3,869,867	-				+2.4
3,869,899	+				-0.5
3,869,899	+				-0.3
3,869,899	+				+0.0
3,869,899	+				+1.9
3,869,899	+				+1.7
3,869,900	-				+0.6
3,869,900	-				+1.3
3,869,900	-				+0.9
3,869,900	-				-0.3
3,869,900	-				+0.2
3,869,900	-				-0.3
3,869,900	-				+0.0
3,869,900	-				-0.1
3,869,957	-		AO353_17550	0.15	-0.2
3,869,960	-		AO353_17550	0.15	+1.6
3,869,980	+		AO353_17550	0.20	+0.3
3,869,980	+		AO353_17550	0.20	+0.8
3,869,995	+		AO353_17550	0.24	+1.5
3,869,995	+		AO353_17550	0.24	-0.2
3,869,995	+		AO353_17550	0.24	-0.4
3,869,995	+		AO353_17550	0.24	+0.1
3,869,995	+		AO353_17550	0.24	+0.6
3,869,995	+		AO353_17550	0.24	+1.8
3,869,995	+		AO353_17550	0.24	+0.6
3,869,996	-		AO353_17550	0.24	+1.0
3,869,996	-		AO353_17550	0.24	+1.4
3,869,996	-		AO353_17550	0.24	+1.0
3,869,996	-		AO353_17550	0.24	-0.2
3,869,996	-		AO353_17550	0.24	+1.7
3,869,996	-		AO353_17550	0.24	-0.3
3,870,016	+		AO353_17550	0.29	-1.0
3,870,016	+		AO353_17550	0.29	+0.7
3,870,016	+		AO353_17550	0.29	-1.1
3,870,016	+		AO353_17550	0.29	+1.0
3,870,017	-		AO353_17550	0.29	+0.0
3,870,017	-		AO353_17550	0.29	-0.1
3,870,017	-		AO353_17550	0.29	+0.7
3,870,017	-		AO353_17550	0.29	+1.0
3,870,019	+		AO353_17550	0.30	-0.7
3,870,019	+		AO353_17550	0.30	-0.9
3,870,019	+		AO353_17550	0.30	-1.4
3,870,019	+		AO353_17550	0.30	+0.3
3,870,019	+		AO353_17550	0.30	-2.3
3,870,019	+		AO353_17550	0.30	-0.2
3,870,019	+		AO353_17550	0.30	+2.0
3,870,020	-		AO353_17550	0.30	+0.3
3,870,020	-		AO353_17550	0.30	+0.4
3,870,020	-		AO353_17550	0.30	-0.4
3,870,020	-		AO353_17550	0.30	-2.0
3,870,020	-		AO353_17550	0.30	+1.4
3,870,020	-		AO353_17550	0.30	+0.0
3,870,020	-		AO353_17550	0.30	+0.8
3,870,020	-		AO353_17550	0.30	-0.5
3,870,020	-		AO353_17550	0.30	-0.4
3,870,020	-		AO353_17550	0.30	+0.4
3,870,022	+		AO353_17550	0.30	-1.1
3,870,023	-		AO353_17550	0.31	+0.3
3,870,037	+		AO353_17550	0.34	+0.0
3,870,037	+		AO353_17550	0.34	+2.2
3,870,041	-		AO353_17550	0.35	-1.3
3,870,041	-		AO353_17550	0.35	-1.3
3,870,064	+		AO353_17550	0.41	+0.8
3,870,064	+		AO353_17550	0.41	+0.3
3,870,065	-		AO353_17550	0.41	+0.6
3,870,065	-		AO353_17550	0.41	+0.7
3,870,065	-		AO353_17550	0.41	+0.2
3,870,065	-		AO353_17550	0.41	+0.0
3,870,082	+		AO353_17550	0.45	+1.5
3,870,082	+		AO353_17550	0.45	+0.3
3,870,083	-		AO353_17550	0.45	+1.2
3,870,101	-		AO353_17550	0.50	+1.1
3,870,103	+		AO353_17550	0.50	+0.2
3,870,103	+		AO353_17550	0.50	-0.2
3,870,103	+		AO353_17550	0.50	-0.3
3,870,104	-		AO353_17550	0.50	+0.6
3,870,136	+		AO353_17550	0.58	-0.2
3,870,353	+				-1.8
3,870,369	+				-0.7
3,870,555	+		AO353_17555	0.17	+1.0
3,870,555	+		AO353_17555	0.17	+0.4
3,870,555	+		AO353_17555	0.17	-0.5
3,870,555	+		AO353_17555	0.17	-0.5
3,870,555	+		AO353_17555	0.17	-0.4
3,870,555	+		AO353_17555	0.17	-1.8
3,870,555	+		AO353_17555	0.17	-0.5
3,870,555	+		AO353_17555	0.17	+0.1
3,870,556	-		AO353_17555	0.17	+1.7
3,870,556	-		AO353_17555	0.17	+1.5
3,870,556	-		AO353_17555	0.17	+1.5
3,870,570	-		AO353_17555	0.18	-0.8
3,870,722	+		AO353_17555	0.32	+0.3
3,870,722	+		AO353_17555	0.32	-0.6
3,870,722	+		AO353_17555	0.32	+0.0
3,870,722	+		AO353_17555	0.32	-3.1
3,870,722	+		AO353_17555	0.32	+0.8
3,870,722	+		AO353_17555	0.32	+1.3
3,870,722	+		AO353_17555	0.32	+0.6
3,870,722	+				+1.0
3,870,723	-		AO353_17555	0.32	+2.9
3,870,723	-		AO353_17555	0.32	+1.8
3,870,723	-		AO353_17555	0.32	+1.5
3,870,723	-		AO353_17555	0.32	-0.2
3,870,723	-		AO353_17555	0.32	+0.5
3,870,723	-		AO353_17555	0.32	+0.6
3,870,723	-		AO353_17555	0.32	-1.0
3,870,880	+		AO353_17555	0.46	-0.2
3,870,880	+		AO353_17555	0.46	-0.7
3,870,881	-		AO353_17555	0.46	+1.9
3,871,132	-		AO353_17555	0.69	-1.1
3,871,159	+		AO353_17555	0.71	-3.0
3,871,159	+		AO353_17555	0.71	-0.9
3,871,160	-		AO353_17555	0.71	+0.9
3,871,165	-		AO353_17555	0.72	-0.3
3,871,165	-		AO353_17555	0.72	+0.9
3,871,246	+		AO353_17555	0.79	-1.0
3,871,247	-		AO353_17555	0.79	-0.4
3,871,247	-		AO353_17555	0.79	-1.3