Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17445

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,852,422	+		AO353_17440	0.37	-0.6
3,852,422	+		AO353_17440	0.37	+0.5
3,852,422	+		AO353_17440	0.37	-0.5
3,852,423	-		AO353_17440	0.37	+1.1
3,852,423	-		AO353_17440	0.37	-0.4
3,852,692	+		AO353_17440	0.57	+1.6
3,852,692	+		AO353_17440	0.57	-0.6
3,852,692	+		AO353_17440	0.57	+0.8
3,852,692	+		AO353_17440	0.57	-0.9
3,852,693	-		AO353_17440	0.57	-0.1
3,852,693	-		AO353_17440	0.57	-0.9
3,852,693	-		AO353_17440	0.57	+0.3
3,852,693	-		AO353_17440	0.57	+0.7
3,852,722	+		AO353_17440	0.59	-0.9
3,852,722	+		AO353_17440	0.59	-1.9
3,852,723	-		AO353_17440	0.59	+0.4
3,852,723	-		AO353_17440	0.59	-0.9
3,852,723	-		AO353_17440	0.59	+0.1
3,852,896	+		AO353_17440	0.72	+0.5
3,852,896	+		AO353_17440	0.72	+1.1
3,852,896	+		AO353_17440	0.72	+0.6
3,852,896	+		AO353_17440	0.72	-2.5
3,852,897	-		AO353_17440	0.72	+1.6
3,852,897	-		AO353_17440	0.72	+2.3
3,852,897	-		AO353_17440	0.72	-0.4
3,852,935	+		AO353_17440	0.75	+0.3
3,852,935	+		AO353_17440	0.75	-1.1
3,852,935	+		AO353_17440	0.75	-1.7
3,852,935	+		AO353_17440	0.75	-0.5
3,852,935	+		AO353_17440	0.75	-1.1
3,852,935	+		AO353_17440	0.75	+0.1
3,852,935	+				+3.9
3,852,935	+		AO353_17440	0.75	-1.7
3,852,935	+		AO353_17440	0.75	+1.1
3,852,935	+		AO353_17440	0.75	+1.6
3,852,935	+		AO353_17440	0.75	+1.1
3,852,935	+		AO353_17440	0.75	+0.1
3,852,936	-		AO353_17440	0.75	-0.2
3,852,936	-		AO353_17440	0.75	+0.8
3,852,936	-		AO353_17440	0.75	+0.8
3,852,936	-		AO353_17440	0.75	-0.5
3,852,936	-		AO353_17440	0.75	+0.9
3,852,936	-		AO353_17440	0.75	+0.7
3,852,936	-		AO353_17440	0.75	+0.4
3,852,936	-		AO353_17440	0.75	-1.2
3,852,936	-		AO353_17440	0.75	-1.9
3,852,936	-		AO353_17440	0.75	+1.1
3,852,936	-		AO353_17440	0.75	-1.5
3,852,936	-		AO353_17440	0.75	-0.3
3,852,936	-		AO353_17440	0.75	-1.1
3,852,936	-		AO353_17440	0.75	+0.2
3,853,139	-				-1.6
3,853,232	+				-0.3
3,853,232	+				+1.1
3,853,232	+				+0.5
3,853,232	+				+0.6
3,853,232	+				+0.8
3,853,232	+				-0.1
3,853,233	-				+0.9
3,853,233	-				-1.3
3,853,233	-				+0.1
3,853,233	-				-2.1
3,853,233	-				+0.1
3,853,233	-				+0.1
3,853,233	-				+1.3
3,853,233	-				-0.5
3,853,233	-				-1.1
3,853,340	-				-2.1
3,853,340	-				+0.8
3,853,340	-				-1.9
3,853,453	-				+1.9
3,853,522	+		AO353_17445	0.23	-0.9
3,853,523	-		AO353_17445	0.23	-2.4
3,853,523	-		AO353_17445	0.23	-0.5
3,853,586	+		AO353_17445	0.35	+0.9
3,853,586	+		AO353_17445	0.35	-1.7
3,853,587	-		AO353_17445	0.35	+0.3
3,853,587	-		AO353_17445	0.35	-1.3
3,853,876	+				+1.5
3,853,877	-				+0.1
3,854,008	+				-0.4
3,854,036	+				-0.1
3,854,077	+				+1.4
3,854,077	+				+0.5
3,854,078	-				-0.9
3,854,078	-				+1.6
3,854,084	+				-0.9
3,854,084	+				+0.2
3,854,084	+				+0.2
3,854,084	+				-2.3
3,854,085	-				+0.4
3,854,085	-				-0.1
3,854,139	+				-0.9
3,854,140	-				+0.2
3,854,140	-				+0.3
3,854,140	-				+0.1
3,854,140	-				+0.9
3,854,140	-				+0.1
3,854,140	-				+0.3
3,854,153	+				+0.6
3,854,175	+				+0.8
3,854,175	+				-1.5
3,854,209	+		AO353_17450	0.13	-0.3
3,854,209	+		AO353_17450	0.13	-0.2
3,854,209	+		AO353_17450	0.13	-0.5
3,854,209	+		AO353_17450	0.13	-2.4
3,854,210	-		AO353_17450	0.13	-1.6
3,854,210	-		AO353_17450	0.13	+0.3
3,854,210	-		AO353_17450	0.13	-0.5
3,854,210	-		AO353_17450	0.13	-0.9
3,854,335	+		AO353_17450	0.36	+0.3
3,854,335	+		AO353_17450	0.36	-1.1
3,854,391	+		AO353_17450	0.47	+0.6
3,854,396	+		AO353_17450	0.48	+2.2
3,854,397	-		AO353_17450	0.48	+3.5
3,854,468	+		AO353_17450	0.61	-0.5
3,854,468	+		AO353_17450	0.61	-0.5
3,854,469	-		AO353_17450	0.61	-1.1
3,854,469	-		AO353_17450	0.61	-1.3
3,854,665	+				+1.0
3,854,665	+				+0.4
3,854,666	-				-0.5
3,854,671	+				-0.1
3,854,671	+				+1.0
3,854,671	+				+0.2
3,854,726	+				+1.1
3,854,727	-				+2.4
3,854,761	+				+2.5
3,854,761	+				-0.7
3,854,762	-				-1.3
3,854,805	+				-0.2
3,854,805	+				-1.5
3,854,806	-				+2.1
3,854,842	+				+0.1
3,854,842	+				+2.4
3,854,842	+				+1.1
3,854,842	+				-0.3
3,854,842	+				+1.1
3,854,842	+				+2.1
3,854,842	+				-0.5
3,854,842	+				+1.1
3,854,842	+				-1.9
3,854,843	-				+0.8
3,854,843	-				-0.7
3,854,843	-				-0.7
3,854,843	-				-0.8
3,854,843	-				+1.1
3,854,843	-				+1.2
3,854,843	-				+0.7
3,854,885	+		AO353_17455	0.17	-0.5
3,854,885	+		AO353_17455	0.17	+0.5
3,854,885	+		AO353_17455	0.17	-2.3
3,854,885	+		AO353_17455	0.17	+0.4
3,854,885	+		AO353_17455	0.17	+2.5
3,854,885	+		AO353_17455	0.17	-1.3
3,854,885	+		AO353_17455	0.17	+0.8
3,854,886	-		AO353_17455	0.17	-2.3
3,854,886	-		AO353_17455	0.17	+0.3
3,854,886	-				+1.6
3,854,886	-		AO353_17455	0.17	+0.7
3,854,886	-		AO353_17455	0.17	-2.0
3,854,886	-		AO353_17455	0.17	-1.1
3,854,886	-		AO353_17455	0.17	+1.5
3,854,886	-		AO353_17455	0.17	-1.0
3,854,886	-		AO353_17455	0.17	+1.6
3,854,924	+		AO353_17455	0.25	-1.5
3,854,924	+		AO353_17455	0.25	-0.7