Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17305

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,826,038	+		AO353_17300	0.38	-1.5
3,826,038	+		AO353_17300	0.38	-2.7
3,826,038	+		AO353_17300	0.38	-1.7
3,826,039	-		AO353_17300	0.39	-1.2
3,826,039	-		AO353_17300	0.39	-3.0
3,826,039	-		AO353_17300	0.39	-3.8
3,826,164	+		AO353_17300	0.49	-2.7
3,826,164	+		AO353_17300	0.49	+1.9
3,826,164	+		AO353_17300	0.49	-3.0
3,826,164	+		AO353_17300	0.49	+0.1
3,826,164	+		AO353_17300	0.49	-0.5
3,826,165	-		AO353_17300	0.49	+0.1
3,826,165	-		AO353_17300	0.49	-0.5
3,826,165	-		AO353_17300	0.49	-2.9
3,826,165	-		AO353_17300	0.49	-1.3
3,826,165	-		AO353_17300	0.49	-1.7
3,826,272	+		AO353_17300	0.59	-1.3
3,826,273	-		AO353_17300	0.59	-1.5
3,826,284	+		AO353_17300	0.60	-0.9
3,826,354	-		AO353_17300	0.66	-2.5
3,826,354	-		AO353_17300	0.66	-1.7
3,826,368	-		AO353_17300	0.67	-4.0
3,826,395	+		AO353_17300	0.69	-2.4
3,826,395	+		AO353_17300	0.69	-1.3
3,826,458	+		AO353_17300	0.75	-1.9
3,826,458	+		AO353_17300	0.75	-2.3
3,826,458	+		AO353_17300	0.75	-1.5
3,826,459	-		AO353_17300	0.75	-1.7
3,826,459	-		AO353_17300	0.75	-0.3
3,826,459	-		AO353_17300	0.75	-3.3
3,826,632	-		AO353_17300	0.90	-2.1
3,826,682	-				+0.6
3,826,717	+				-2.9
3,826,795	+				-2.5
3,826,795	+				-1.3
3,826,796	-				+2.8
3,826,796	-				-2.1
3,826,796	-				+0.5
3,826,827	+				+0.1
3,826,827	+				-0.9
3,826,827	+				-1.9
3,826,849	-				+3.3
3,826,923	+				-0.9
3,826,924	-				+4.9
3,826,924	-				+4.1
3,826,963	+				+0.1
3,826,963	+				-1.5
3,826,963	+				-0.5
3,826,963	+				-1.5
3,826,963	+				-0.9
3,826,964	-				+5.7
3,826,964	-				+4.0
3,826,976	+				-2.3
3,826,976	+				-0.5
3,826,976	+				-2.4
3,826,976	+				+0.1
3,826,976	+				-2.1
3,826,976	+				-1.5
3,826,977	-				+2.7
3,826,977	-				+4.6
3,826,977	-				+4.9
3,826,977	-				+3.1
3,826,977	-				+5.1
3,826,977	-				+3.9
3,827,011	+				+2.2
3,827,011	+				+1.1
3,827,011	+				+0.6
3,827,012	-				+4.6
3,827,064	+				+1.7
3,827,064	+				+0.6
3,827,065	-				+3.7
3,827,090	+		AO353_17305	0.11	+1.6
3,827,090	+		AO353_17305	0.11	+1.8
3,827,090	+		AO353_17305	0.11	+3.3
3,827,091	-		AO353_17305	0.12	+5.7
3,827,091	-		AO353_17305	0.12	+3.5
3,827,091	-		AO353_17305	0.12	+3.8
3,827,162	+		AO353_17305	0.23	+2.2
3,827,162	+		AO353_17305	0.23	+1.6
3,827,162	+		AO353_17305	0.23	+2.1
3,827,162	+		AO353_17305	0.23	+3.2
3,827,162	+		AO353_17305	0.23	+3.5
3,827,163	-		AO353_17305	0.23	+5.0
3,827,163	-		AO353_17305	0.23	+4.7
3,827,163	-		AO353_17305	0.23	+4.0
3,827,456	-		AO353_17305	0.69	+5.1
3,827,456	-		AO353_17305	0.69	+5.0
3,827,525	+		AO353_17305	0.80	+5.2
3,827,525	+		AO353_17305	0.80	+5.5
3,827,525	+		AO353_17305	0.80	+5.1
3,827,525	+		AO353_17305	0.80	+4.6
3,827,525	+		AO353_17305	0.80	+3.6
3,827,526	-		AO353_17305	0.80	+4.4
3,827,526	-		AO353_17305	0.80	+5.3
3,827,526	-		AO353_17305	0.80	+4.0
3,827,544	-		AO353_17305	0.83	+4.5
3,827,544	-		AO353_17305	0.83	+3.8
3,827,662	+				-0.9
3,827,662	+				-1.6
3,827,662	+				+1.1
3,827,662	+				-2.9
3,827,663	-				+2.6
3,827,663	-				+4.7
3,827,663	-				+3.4
3,827,663	-				+4.3
3,827,685	-				+3.4
3,827,724	-				+3.1
3,827,724	-				+4.4
3,827,724	-				+5.2
3,827,736	+				+1.6
3,827,736	+				-1.7
3,827,736	+				-0.7
3,827,736	+				-0.7
3,827,736	+				-1.3
3,827,736	+				-1.4
3,827,736	+				-0.9
3,827,736	+				-2.5
3,827,736	+				-0.3
3,827,736	+				-0.8
3,827,736	+				-1.5
3,827,736	+				-2.9
3,827,736	+				+1.1
3,827,736	+				-1.1
3,827,736	+				-0.3
3,827,736	+				-1.7
3,827,737	-				+1.1
3,827,737	-				+2.5
3,827,737	-				+3.6
3,827,737	-				+2.4
3,827,737	-				+2.0
3,827,737	-				+2.3
3,827,737	-				+2.0
3,827,737	-				+2.2
3,827,737	-				+1.2
3,827,737	-				+2.5
3,827,737	-				+2.3
3,827,738	+				-0.3
3,827,738	+				-1.2
3,827,738	+				-0.9
3,827,738	+				-1.7
3,827,739	-				+2.2
3,827,739	-				+3.0
3,827,739	-				+1.6
3,827,740	+				-1.3
3,827,740	+				-2.7
3,827,740	+				-1.5
3,827,740	+				-1.7
3,827,740	+				-1.1
3,827,740	+				-1.3
3,827,740	+				-2.3
3,827,741	-				+1.9
3,827,741	-				+1.9
3,827,741	-				+2.1
3,827,741	-				+3.4
3,827,741	-				+1.8
3,827,741	-				-0.5
3,827,741	-				+1.8
3,827,773	+				-2.8
3,827,774	-				+2.6
3,827,777	+				+1.1
3,827,777	+				-1.9
3,827,778	-				+2.2
3,827,778	-				+1.3
3,827,778	-				+1.2
3,827,778	-				+3.0
3,827,784	+				-1.9
3,827,785	-				+3.3
3,827,800	+				-0.9
3,827,800	+				-1.2
3,827,800	+				-1.7
3,827,800	+				-1.6
3,827,800	+				-0.5
3,827,800	+				+0.3
3,827,801	-				+2.8
3,827,801	-				+3.1
3,827,801	-				+1.1
3,827,801	-				+1.9
3,827,801	-				+1.8
3,827,801	-				+0.4
3,827,952	+		AO353_17310	0.17	+0.5
3,827,952	+		AO353_17310	0.17	-2.4
3,827,952	+		AO353_17310	0.17	-1.3
3,827,993	+		AO353_17310	0.23	+0.6
3,827,993	+				-0.9
3,827,993	+		AO353_17310	0.23	-1.3
3,827,993	+		AO353_17310	0.23	-0.5
3,827,993	+		AO353_17310	0.23	+1.5
3,827,994	-		AO353_17310	0.24	-0.5
3,827,994	-		AO353_17310	0.24	+2.6
3,827,994	-		AO353_17310	0.24	+0.6
3,827,994	-		AO353_17310	0.24	-1.7
3,827,994	-		AO353_17310	0.24	-2.5
3,827,994	-		AO353_17310	0.24	-2.6
3,828,000	+				+1.5
3,828,001	-		AO353_17310	0.25	-1.0
3,828,041	+		AO353_17310	0.31	+1.4
3,828,094	+		AO353_17310	0.39	+0.3
3,828,094	+		AO353_17310	0.39	-0.4
3,828,094	+		AO353_17310	0.39	-1.3
3,828,094	+		AO353_17310	0.39	+0.3
3,828,094	+		AO353_17310	0.39	-0.9
3,828,094	+		AO353_17310	0.39	+0.3
3,828,094	+		AO353_17310	0.39	-0.5
3,828,094	+		AO353_17310	0.39	+0.8
3,828,095	-		AO353_17310	0.39	-0.6
3,828,095	-		AO353_17310	0.39	+1.1
3,828,095	-		AO353_17310	0.39	-0.2
3,828,095	-		AO353_17310	0.39	+1.1
3,828,095	-		AO353_17310	0.39	+0.6
3,828,095	-		AO353_17310	0.39	+1.6
3,828,095	-		AO353_17310	0.39	+0.8
3,828,095	-		AO353_17310	0.39	+2.6
3,828,095	-		AO353_17310	0.39	+2.8
3,828,095	-		AO353_17310	0.39	+0.7
3,828,098	+		AO353_17310	0.40	+0.5
3,828,098	+		AO353_17310	0.40	-0.7
3,828,098	+		AO353_17310	0.40	-0.7
3,828,098	+		AO353_17310	0.40	+0.2
3,828,098	+		AO353_17310	0.40	-2.5
3,828,098	+		AO353_17310	0.40	-2.1
3,828,099	-		AO353_17310	0.40	+0.1
3,828,099	-		AO353_17310	0.40	+0.1
3,828,099	-		AO353_17310	0.40	-0.2
3,828,099	-		AO353_17310	0.40	-0.4
3,828,099	-		AO353_17310	0.40	-0.3
3,828,099	-		AO353_17310	0.40	+0.6
3,828,099	-		AO353_17310	0.40	+0.1
3,828,100	+		AO353_17310	0.40	+0.1
3,828,100	+		AO353_17310	0.40	-1.7
3,828,100	+		AO353_17310	0.40	-0.4
3,828,125	+		AO353_17310	0.44	-0.2
3,828,125	+		AO353_17310	0.44	-3.3
3,828,125	+		AO353_17310	0.44	-0.0
3,828,126	-		AO353_17310	0.44	-1.1
3,828,126	-		AO353_17310	0.44	+0.7
3,828,126	-		AO353_17310	0.44	+0.1
3,828,126	-		AO353_17310	0.44	-0.2
3,828,126	-		AO353_17310	0.44	-0.6
3,828,126	-		AO353_17310	0.44	+1.5
3,828,215	+		AO353_17310	0.58	-1.5
3,828,215	+		AO353_17310	0.58	-1.9
3,828,215	+		AO353_17310	0.58	+0.5
3,828,215	+		AO353_17310	0.58	-1.6
3,828,215	+		AO353_17310	0.58	+0.5
3,828,216	-		AO353_17310	0.58	+0.5
3,828,216	-		AO353_17310	0.58	+0.1
3,828,231	+		AO353_17310	0.60	-2.4
3,828,318	+		AO353_17310	0.74	-1.5
3,828,319	-		AO353_17310	0.74	+1.1
3,828,390	+		AO353_17310	0.85	+0.1
3,828,409	+		AO353_17310	0.88	-2.3
3,828,409	+		AO353_17310	0.88	-1.9
3,828,410	-		AO353_17310	0.88	-1.9
3,828,430	+				+1.1
3,828,430	+				-0.5
3,828,430	+				-1.7
3,828,430	+				+0.6
3,828,457	+				-0.5
3,828,458	-				-1.1
3,828,505	+				-0.3
3,828,505	+				+1.3
3,828,505	+				-0.1
3,828,506	-				+0.2
3,828,506	-				-1.1
3,828,509	+				+0.3
3,828,509	+				-0.9
3,828,509	+				-1.9
3,828,509	+				-1.1
3,828,510	-				-0.9
3,828,510	-				+1.5
3,828,570	+				-1.7
3,828,570	+				-0.8
3,828,570	+				+0.2
3,828,570	+				+0.2
3,828,570	+				-1.3
3,828,570	+				-1.7
3,828,570	+				-1.5
3,828,570	+				-1.5
3,828,571	-				+0.5
3,828,571	-				+0.6