Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17000

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,757,661	+				-0.5
3,757,661	+				-1.7
3,757,662	-				+1.4
3,757,672	+				+0.4
3,757,672	+				+1.3
3,757,704	-		AO353_16990	0.14	-0.8
3,757,704	-		AO353_16990	0.14	+1.0
3,757,704	-		AO353_16990	0.14	+0.4
3,757,821	+		AO353_16990	0.38	-2.1
3,757,821	+		AO353_16990	0.38	-0.5
3,757,821	+		AO353_16990	0.38	-1.7
3,757,821	+		AO353_16990	0.38	+1.1
3,757,822	-		AO353_16990	0.39	+3.1
3,757,822	-		AO353_16990	0.39	-0.2
3,757,822	-		AO353_16990	0.39	-0.9
3,757,822	-		AO353_16990	0.39	-0.2
3,757,822	-		AO353_16990	0.39	+0.4
3,757,822	-		AO353_16990	0.39	-0.5
3,757,822	-		AO353_16990	0.39	-1.4
3,757,889	+		AO353_16990	0.52	+1.8
3,757,890	-		AO353_16990	0.53	-0.3
3,757,890	-		AO353_16990	0.53	+0.5
3,757,890	-		AO353_16990	0.53	+0.8
3,757,921	+		AO353_16990	0.59	-0.7
3,757,921	+		AO353_16990	0.59	+0.2
3,757,921	+		AO353_16990	0.59	+0.7
3,757,921	+		AO353_16990	0.59	-0.7
3,757,922	-		AO353_16990	0.59	-1.5
3,757,922	-		AO353_16990	0.59	+0.2
3,757,922	-		AO353_16990	0.59	-0.5
3,757,922	-		AO353_16990	0.59	-0.3
3,757,922	-		AO353_16990	0.59	+0.7
3,757,922	-		AO353_16990	0.59	+0.1
3,757,922	-		AO353_16990	0.59	+0.4
3,757,922	-		AO353_16990	0.59	+1.1
3,757,922	-		AO353_16990	0.59	+0.2
3,757,956	+		AO353_16990	0.66	+0.3
3,757,956	+		AO353_16990	0.66	-0.2
3,757,957	-		AO353_16990	0.66	-2.5
3,757,957	-		AO353_16990	0.66	-1.2
3,757,957	-		AO353_16990	0.66	-0.5
3,758,096	+				+0.9
3,758,119	+				+0.2
3,758,119	+				-0.2
3,758,120	-				-1.7
3,758,120	-				-0.2
3,758,125	+				+2.5
3,758,125	+				-2.2
3,758,125	+				-0.5
3,758,125	+				+1.4
3,758,125	+				-0.5
3,758,125	+				-0.6
3,758,125	+				+0.7
3,758,125	+				-0.1
3,758,125	+				-1.2
3,758,125	+				+1.1
3,758,125	+				-0.9
3,758,126	-				-0.5
3,758,126	-				+0.8
3,758,126	-				+1.1
3,758,126	-				-0.1
3,758,126	-				-0.7
3,758,126	-				+0.1
3,758,126	-				+0.1
3,758,126	-				+1.1
3,758,126	-				+0.8
3,758,126	-				+3.1
3,758,126	-				-1.7
3,758,148	-				-1.3
3,758,148	-				-1.7
3,758,178	+				+1.1
3,758,178	+				-2.6
3,758,178	+				+0.4
3,758,252	+		AO353_16995	0.18	-0.8
3,758,252	+		AO353_16995	0.18	+1.1
3,758,252	+		AO353_16995	0.18	+2.1
3,758,253	-		AO353_16995	0.18	-0.9
3,758,253	-		AO353_16995	0.18	-0.4
3,758,253	-		AO353_16995	0.18	-0.9
3,758,271	+		AO353_16995	0.22	+0.5
3,758,271	+		AO353_16995	0.22	-0.3
3,758,271	+		AO353_16995	0.22	-0.5
3,758,271	+		AO353_16995	0.22	+0.1
3,758,271	+		AO353_16995	0.22	+1.0
3,758,271	+		AO353_16995	0.22	-0.6
3,758,499	+		AO353_16995	0.70	-1.2
3,758,500	-		AO353_16995	0.70	+0.1
3,758,520	+		AO353_16995	0.74	+1.1
3,758,520	+		AO353_16995	0.74	+1.4
3,758,520	+		AO353_16995	0.74	-0.4
3,758,520	+		AO353_16995	0.74	-1.2
3,758,520	+		AO353_16995	0.74	-1.4
3,758,521	-		AO353_16995	0.75	+1.1
3,758,521	-		AO353_16995	0.75	+1.5
3,758,521	-		AO353_16995	0.75	+0.2
3,758,635	+				+3.3
3,758,635	+				+0.9
3,758,635	+				-0.9
3,758,636	-				-1.2
3,758,636	-				-0.3
3,758,636	-				-1.7
3,758,636	-				+2.4
3,758,636	-				+1.0
3,758,636	-				-1.2
3,758,656	+				+0.2
3,758,656	+				-0.5
3,758,657	-				+1.1
3,758,657	-				+1.0
3,758,719	+		AO353_17000	0.15	-0.6
3,758,719	+		AO353_17000	0.15	-2.7
3,758,734	+		AO353_17000	0.18	-0.1
3,758,734	+		AO353_17000	0.18	-0.4
3,758,734	+		AO353_17000	0.18	+0.1
3,758,734	+		AO353_17000	0.18	-1.5
3,758,734	+		AO353_17000	0.18	-0.4
3,758,734	+		AO353_17000	0.18	-0.5
3,758,735	-		AO353_17000	0.18	-0.3
3,758,735	-		AO353_17000	0.18	+0.4
3,758,735	-		AO353_17000	0.18	-1.1
3,758,735	-		AO353_17000	0.18	-1.5
3,758,735	-		AO353_17000	0.18	-2.6
3,758,735	-		AO353_17000	0.18	-0.9
3,758,735	-		AO353_17000	0.18	-0.5
3,758,738	+		AO353_17000	0.18	-0.9
3,758,739	-		AO353_17000	0.19	+0.9
3,758,858	+		AO353_17000	0.43	+0.4
3,759,082	+		AO353_17000	0.88	-0.2
3,759,131	+				+0.1
3,759,131	+				+2.1
3,759,131	+				-0.1
3,759,131	+				-0.5
3,759,131	+				-1.6
3,759,132	-				+0.6
3,759,132	-				-0.3
3,759,132	-				+0.6
3,759,173	+				-1.7
3,759,196	+				+0.2
3,759,235	+				-0.9
3,759,235	+				+1.7
3,759,235	+				-0.5
3,759,235	+				+1.4
3,759,299	-				+0.3
3,759,299	-				-0.4
3,759,338	+				+1.9
3,759,375	+				+0.5
3,759,375	+				-0.1
3,759,376	-				-1.5
3,759,376	-				-0.1
3,759,376	-				+0.7
3,759,394	+				+0.4
3,759,394	+				-0.3
3,759,394	+				+0.6
3,759,394	+				+0.6
3,759,394	+				-0.2
3,759,394	+				+1.1
3,759,394	+				+1.1
3,759,394	+				+0.2
3,759,395	-				+0.8
3,759,395	-				-1.2
3,759,395	-				+1.6
3,759,395	-				+0.9
3,759,555	+		AO353_17005	0.57	+0.3
3,759,567	+		AO353_17005	0.61	+1.1
3,759,567	+		AO353_17005	0.61	+1.1
3,759,567	+		AO353_17005	0.61	-0.5
3,759,567	+		AO353_17005	0.61	+0.2
3,759,568	-		AO353_17005	0.61	+2.1
3,759,619	-		AO353_17005	0.80	-0.2
3,759,673	+				-2.5
3,759,673	+				+0.2
3,759,673	+				+1.1
3,759,673	+				+1.1
3,759,673	+				+1.3
3,759,673	+				-1.2
3,759,674	-				-0.5
3,759,674	-				-0.2
3,759,920	-		AO353_17010	0.33	+1.1
3,759,920	-		AO353_17010	0.33	+0.1
3,759,980	+		AO353_17010	0.41	-0.2
3,759,980	+		AO353_17010	0.41	-0.3
3,759,980	+		AO353_17010	0.41	-0.1
3,759,980	+		AO353_17010	0.41	-0.9
3,759,980	+		AO353_17010	0.41	-1.5
3,759,981	-		AO353_17010	0.41	-1.2
3,759,981	-		AO353_17010	0.41	+1.2
3,759,981	-		AO353_17010	0.41	+0.3
3,760,085	+		AO353_17010	0.55	+0.0
3,760,085	+		AO353_17010	0.55	+0.1
3,760,085	+		AO353_17010	0.55	+1.5
3,760,086	-		AO353_17010	0.55	+0.4