Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_15620

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,454,832	+		AO353_15610	0.68	+1.1
3,454,833	-		AO353_15610	0.68	+0.4
3,454,833	-		AO353_15610	0.68	-0.4
3,454,833	-		AO353_15610	0.68	+0.4
3,454,835	-		AO353_15610	0.68	-1.8
3,455,068	+				+0.4
3,455,068	+				-1.3
3,455,068	+				-0.2
3,455,068	+				-0.7
3,455,068	+				-0.2
3,455,069	-				+0.5
3,455,069	-				-0.9
3,455,069	-				-0.9
3,455,069	-				-0.1
3,455,069	-				+0.9
3,455,069	-				-0.2
3,455,069	-				-1.0
3,455,069	-				+1.2
3,455,069	-				+0.9
3,455,069	-				+0.8
3,455,090	+				-0.4
3,455,090	+				-0.8
3,455,090	+				-1.4
3,455,090	+				+1.6
3,455,090	+				+0.7
3,455,090	+				+2.2
3,455,090	+				+0.6
3,455,090	+				+2.0
3,455,091	-				+1.3
3,455,091	-				-0.3
3,455,091	-				+0.4
3,455,091	-				-1.3
3,455,091	-				+1.4
3,455,091	-				+0.1
3,455,091	-				+0.7
3,455,091	-				+0.7
3,455,091	-				+0.5
3,455,091	-				-0.8
3,455,091	-				+0.0
3,455,091	-				-0.1
3,455,119	-				-0.8
3,455,132	+				-0.4
3,455,133	-				-1.0
3,455,133	-				-0.3
3,455,168	+				+0.0
3,455,168	+				-0.5
3,455,168	+				+1.2
3,455,169	-				+0.2
3,455,169	-				-1.2
3,455,169	-				-0.2
3,455,200	+				+0.4
3,455,200	+				-0.4
3,455,238	+				-1.2
3,455,280	+		AO353_15615	0.13	-1.7
3,455,280	+		AO353_15615	0.13	+1.0
3,455,280	+		AO353_15615	0.13	-0.1
3,455,280	+		AO353_15615	0.13	-0.2
3,455,280	+		AO353_15615	0.13	-0.1
3,455,280	+		AO353_15615	0.13	+0.5
3,455,280	+		AO353_15615	0.13	-0.7
3,455,281	-		AO353_15615	0.13	+0.7
3,455,353	+		AO353_15615	0.27	+0.4
3,455,429	+		AO353_15615	0.42	-2.5
3,455,429	+		AO353_15615	0.42	-0.8
3,455,430	-		AO353_15615	0.42	-0.4
3,455,430	-		AO353_15615	0.42	-1.8
3,455,430	-		AO353_15615	0.42	-0.4
3,455,464	+		AO353_15615	0.48	+0.6
3,455,464	+		AO353_15615	0.48	-1.3
3,455,649	+		AO353_15615	0.84	+0.5
3,455,649	+		AO353_15615	0.84	-0.2
3,455,649	+		AO353_15615	0.84	+0.6
3,455,649	+		AO353_15615	0.84	+0.3
3,455,649	+		AO353_15615	0.84	+0.9
3,455,649	+		AO353_15615	0.84	-0.8
3,455,649	+		AO353_15615	0.84	+1.5
3,455,649	+		AO353_15615	0.84	+1.7
3,455,649	+		AO353_15615	0.84	-1.9
3,455,649	+		AO353_15615	0.84	+1.8
3,455,650	-		AO353_15615	0.84	+1.2
3,455,650	-		AO353_15615	0.84	+0.8
3,455,650	-		AO353_15615	0.84	-0.4
3,455,650	-		AO353_15615	0.84	-0.3
3,455,650	-		AO353_15615	0.84	+1.2
3,455,650	-		AO353_15615	0.84	-1.6
3,455,650	-		AO353_15615	0.84	+1.2
3,455,650	-		AO353_15615	0.84	-2.2
3,455,650	-		AO353_15615	0.84	+2.2
3,455,650	-		AO353_15615	0.84	-0.6
3,455,650	-		AO353_15615	0.84	+1.2
3,455,679	+		AO353_15615	0.90	-0.8
3,455,680	-				+2.0
3,455,680	-				-0.2
3,455,680	-				+1.8
3,455,680	-				-1.4
3,455,680	-				-0.4
3,455,680	-				+0.2
3,455,680	-				+1.7
3,455,685	-				-1.7
3,455,762	+				-0.4
3,455,762	+				-0.8
3,455,762	+				-0.4
3,455,762	+				-1.4
3,455,763	-				+0.2
3,455,763	-				-0.4
3,455,763	-				+0.3
3,455,763	-				+0.2
3,455,763	-				-0.5
3,455,775	+				-0.0
3,455,775	+				-0.2
3,455,775	+				+0.2
3,455,775	+				-0.8
3,455,775	+				-0.3
3,455,775	+				-0.4
3,455,775	+				-0.9
3,455,775	+				-0.7
3,455,775	+				+0.3
3,455,775	+				+0.3
3,455,775	+				-1.0
3,455,776	-				-0.3
3,455,776	-				+0.6
3,455,776	-				-0.1
3,455,776	-				+1.0
3,455,776	-				+0.4
3,455,776	-				-0.8
3,455,798	-				-1.7
3,455,798	-				-1.6
3,455,983	+		AO353_15620	0.11	+2.0
3,456,012	-		AO353_15620	0.13	+0.2
3,456,012	-		AO353_15620	0.13	+1.0
3,456,495	+		AO353_15620	0.40	-2.3
3,456,495	+		AO353_15620	0.40	+0.3
3,456,495	+		AO353_15620	0.40	-0.8
3,456,496	-		AO353_15620	0.40	-0.8
3,456,496	-		AO353_15620	0.40	-0.4
3,456,496	-		AO353_15620	0.40	+0.0
3,456,733	+		AO353_15620	0.53	-0.2
3,456,733	+		AO353_15620	0.53	-0.4
3,456,733	+		AO353_15620	0.53	-0.2
3,456,734	-		AO353_15620	0.53	-0.8
3,456,734	-		AO353_15620	0.53	-0.6
3,456,734	-		AO353_15620	0.53	-0.8
3,456,766	+		AO353_15620	0.55	-0.7
3,456,766	+		AO353_15620	0.55	-0.2
3,456,766	+		AO353_15620	0.55	+2.2
3,456,767	-		AO353_15620	0.55	+1.0
3,456,767	-		AO353_15620	0.55	-0.6
3,456,767	-		AO353_15620	0.55	+0.4
3,456,791	-		AO353_15620	0.56	-0.8
3,456,791	-		AO353_15620	0.56	-0.8
3,456,873	+		AO353_15620	0.61	+1.2
3,456,873	+		AO353_15620	0.61	-1.4
3,456,873	+		AO353_15620	0.61	+0.5
3,456,873	+		AO353_15620	0.61	-0.4
3,456,873	+		AO353_15620	0.61	-1.2
3,456,873	+		AO353_15620	0.61	+0.4
3,456,873	+		AO353_15620	0.61	+0.8
3,456,873	+		AO353_15620	0.61	+0.5
3,456,874	-		AO353_15620	0.61	+0.6
3,456,874	-		AO353_15620	0.61	+1.9
3,456,949	+		AO353_15620	0.65	-2.0
3,456,949	+		AO353_15620	0.65	+0.6
3,456,964	+		AO353_15620	0.66	+1.6
3,456,964	+		AO353_15620	0.66	+0.0
3,456,964	+		AO353_15620	0.66	-1.4
3,457,018	+		AO353_15620	0.69	+0.2
3,457,018	+		AO353_15620	0.69	+0.8
3,457,019	-		AO353_15620	0.69	+0.2
3,457,019	-		AO353_15620	0.69	-0.4
3,457,156	+		AO353_15620	0.76	-1.6
3,457,156	+		AO353_15620	0.76	-1.6
3,457,156	+		AO353_15620	0.76	-0.8
3,457,156	+		AO353_15620	0.76	+1.4
3,457,157	-		AO353_15620	0.76	-1.0
3,457,165	+		AO353_15620	0.77	-0.5
3,457,187	+		AO353_15620	0.78	+0.6
3,457,187	+		AO353_15620	0.78	+0.6
3,457,226	-		AO353_15620	0.80	+0.4
3,457,226	-		AO353_15620	0.80	+0.7
3,457,489	+				-1.6
3,457,489	+				+1.2
3,457,490	-				+0.5
3,457,490	-				-1.2
3,457,490	-				-0.4
3,457,490	-				-0.4
3,457,567	+				+1.2
3,457,567	+				-0.4
3,457,567	+				-0.6
3,457,568	-				+0.3
3,457,568	-				+0.2
3,457,568	-				-0.4
3,457,575	+				-0.1
3,457,575	+				+0.2
3,457,575	+				-0.3
3,457,576	-				+0.3
3,457,576	-				+1.6
3,457,576	-				+0.6
3,457,620	+				-1.2
3,457,620	+				-0.6
3,457,621	-				+0.2
3,457,621	-				+2.5
3,457,621	-				-1.6
3,457,692	+				+0.6
3,457,692	+				+0.2
3,457,692	+				-0.0
3,457,692	+				+0.2
3,457,693	-				-1.6
3,457,693	-				-0.8
3,457,693	-				+0.2
3,457,693	-				-1.4
3,457,693	-				-2.0
3,457,693	-				-0.2
3,457,702	+				-0.6
3,457,702	+				+0.2
3,457,702	+				+1.2
3,457,702	+				-0.6
3,457,702	+				-0.2
3,457,702	+				+0.6
3,457,703	-				+0.2
3,457,703	-				-0.5
3,457,708	-				-0.2
3,457,708	-				-1.5
3,457,708	-				+0.9
3,457,708	-				+0.9
3,457,712	-				+1.6
3,457,774	+				-1.4
3,457,774	+				-1.8
3,457,774	+				+1.6
3,457,774	+				-1.5
3,457,775	-				-1.2
3,457,775	-				-1.2
3,457,775	-				+0.3
3,457,775	-				-0.4
3,457,788	+				-0.4
3,457,788	+				+1.2
3,457,788	+				-0.4
3,457,789	-				+0.6
3,457,789	-				-1.1
3,457,789	-				+0.7
3,457,789	-				-1.2
3,457,821	-				+1.2
3,457,821	-				+1.2
3,457,821	-				-1.0
3,457,821	-				+0.7
3,458,074	-		AO353_15625	0.38	+1.7
3,458,074	-		AO353_15625	0.38	-2.0
3,458,148	+		AO353_15625	0.48	+0.7
3,458,148	+		AO353_15625	0.48	+0.8
3,458,149	-		AO353_15625	0.48	-1.3
3,458,169	+		AO353_15625	0.51	+1.8
3,458,169	+		AO353_15625	0.51	+0.4
3,458,169	+		AO353_15625	0.51	+1.0
3,458,169	+		AO353_15625	0.51	+0.9
3,458,169	+		AO353_15625	0.51	+0.2
3,458,170	-		AO353_15625	0.51	+0.8
3,458,170	-		AO353_15625	0.51	+1.1
3,458,286	+		AO353_15625	0.68	+1.6
3,458,286	+		AO353_15625	0.68	+0.2
3,458,286	+		AO353_15625	0.68	+1.2
3,458,287	-		AO353_15625	0.68	-1.3
3,458,287	-		AO353_15625	0.68	+1.4
3,458,287	-		AO353_15625	0.68	-0.1
3,458,349	+		AO353_15625	0.77	+1.3
3,458,349	+		AO353_15625	0.77	+1.2
3,458,349	+		AO353_15625	0.77	+0.8
3,458,349	+		AO353_15625	0.77	+0.8
3,458,349	+		AO353_15625	0.77	-1.6
3,458,350	-		AO353_15625	0.77	+1.1
3,458,350	-		AO353_15625	0.77	+0.9
3,458,350	-		AO353_15625	0.77	+0.2
3,458,350	-		AO353_15625	0.77	+0.9
3,458,350	-		AO353_15625	0.77	+0.9
3,458,361	+		AO353_15625	0.78	+0.7
3,458,362	-		AO353_15625	0.79	+1.2
3,458,376	+		AO353_15625	0.81	-2.3
3,458,376	+		AO353_15625	0.81	+1.2
3,458,377	-		AO353_15625	0.81	+1.6
3,458,377	-		AO353_15625	0.81	-0.8
3,458,409	+		AO353_15625	0.85	-0.1
3,458,409	+		AO353_15625	0.85	-0.8
3,458,409	+		AO353_15625	0.85	-1.8
3,458,410	-		AO353_15625	0.85	-0.1
3,458,410	-		AO353_15625	0.85	+0.8
3,458,410	-		AO353_15625	0.85	-1.3
3,458,415	+		AO353_15625	0.86	+0.7
3,458,415	+		AO353_15625	0.86	+0.4
3,458,415	+		AO353_15625	0.86	-0.3
3,458,415	+		AO353_15625	0.86	+0.2
3,458,415	+		AO353_15625	0.86	-1.1
3,458,415	+		AO353_15625	0.86	-0.4
3,458,415	+		AO353_15625	0.86	+0.4
3,458,416	-		AO353_15625	0.86	+0.0
3,458,416	-		AO353_15625	0.86	-0.8
3,458,416	-		AO353_15625	0.86	+1.6
3,458,511	+				+2.2
3,458,511	+				+0.7
3,458,511	+				-0.3
3,458,511	+				-0.1
3,458,511	+				-1.4
3,458,511	+				+0.2
3,458,511	+				-2.3
3,458,511	+				-1.8
3,458,511	+				-1.4
3,458,512	-				-2.4
3,458,512	-				-0.2
3,458,512	-				-0.7
3,458,512	-				-1.6
3,458,512	-				-0.3
3,458,512	-				+0.4
3,458,512	-				+1.3
3,458,512	-				-0.4
3,458,512	-				-0.5
3,458,512	-				-1.2
3,458,512	-				+1.4
3,458,512	-				+1.2
3,458,512	-				+1.1
3,458,512	-				-0.4
3,458,512	-				+2.2
3,458,512	-				-0.8
3,458,561	+				+0.3
3,458,561	+				-1.7
3,458,561	+				-0.8
3,458,562	-				-0.6
3,458,562	-				+0.9
3,458,562	-				+0.9