Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14655

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,246,395	+		AO353_14645	0.41	+0.4
3,246,396	-		AO353_14645	0.41	+0.7
3,246,404	+		AO353_14645	0.42	+1.0
3,246,404	+		AO353_14645	0.42	-2.1
3,246,404	+		AO353_14645	0.42	-1.0
3,246,404	+		AO353_14645	0.42	+2.0
3,246,619	+		AO353_14645	0.76	+0.9
3,246,625	+		AO353_14645	0.76	+0.5
3,246,644	+		AO353_14645	0.79	-0.2
3,246,645	-		AO353_14645	0.80	-0.5
3,246,693	-		AO353_14645	0.87	+0.5
3,246,693	-		AO353_14645	0.87	+1.0
3,246,693	-		AO353_14645	0.87	-0.5
3,246,693	-		AO353_14645	0.87	-0.3
3,246,693	-		AO353_14645	0.87	-2.2
3,246,693	-		AO353_14645	0.87	+0.5
3,246,693	-		AO353_14645	0.87	+1.3
3,246,737	+				-0.6
3,246,737	+				-1.2
3,246,737	+				+0.8
3,246,737	+				+0.7
3,246,737	+				+0.4
3,246,737	+				+1.3
3,246,738	-				+1.3
3,246,738	-				-0.4
3,246,738	-				-0.2
3,246,781	+				+0.9
3,246,789	+				-1.5
3,246,851	+				+0.7
3,246,852	-				+0.2
3,246,857	+				+0.4
3,246,902	+				+0.7
3,246,902	+				-0.3
3,246,903	-				+0.4
3,246,903	-				-0.7
3,246,903	-				-0.3
3,247,063	+		AO353_14650	0.53	+0.9
3,247,063	+		AO353_14650	0.53	-1.0
3,247,064	-		AO353_14650	0.53	+1.9
3,247,064	-		AO353_14650	0.53	+0.3
3,247,105	+		AO353_14650	0.65	-1.0
3,247,105	+		AO353_14650	0.65	+1.1
3,247,151	+		AO353_14650	0.78	+0.4
3,247,151	+		AO353_14650	0.78	-0.3
3,247,151	+		AO353_14650	0.78	+0.9
3,247,151	+		AO353_14650	0.78	-1.0
3,247,151	+		AO353_14650	0.78	-0.1
3,247,151	+		AO353_14650	0.78	-1.7
3,247,151	+		AO353_14650	0.78	+0.0
3,247,151	+		AO353_14650	0.78	+1.8
3,247,151	+		AO353_14650	0.78	-2.0
3,247,152	-		AO353_14650	0.78	-2.2
3,247,152	-		AO353_14650	0.78	+0.3
3,247,152	-		AO353_14650	0.78	+0.3
3,247,152	-		AO353_14650	0.78	-0.6
3,247,152	-		AO353_14650	0.78	-1.7
3,247,152	-		AO353_14650	0.78	+0.3
3,247,152	-		AO353_14650	0.78	-2.5
3,247,166	+		AO353_14650	0.82	+0.3
3,247,166	+		AO353_14650	0.82	+0.9
3,247,166	+		AO353_14650	0.82	+0.9
3,247,166	+		AO353_14650	0.82	+0.8
3,247,166	+		AO353_14650	0.82	-0.3
3,247,166	+		AO353_14650	0.82	-0.7
3,247,167	-		AO353_14650	0.82	+0.9
3,247,182	+		AO353_14650	0.87	+2.0
3,247,182	+		AO353_14650	0.87	+1.0
3,247,183	-		AO353_14650	0.87	-0.5
3,247,183	-		AO353_14650	0.87	-3.0
3,247,214	+				-0.4
3,247,214	+				+0.3
3,247,214	+				-0.5
3,247,214	+				-1.0
3,247,214	+				-1.0
3,247,214	+				-0.4
3,247,214	+				+0.1
3,247,214	+				+0.0
3,247,214	+				+0.3
3,247,214	+				+0.1
3,247,214	+				+0.7
3,247,215	-				+1.9
3,247,215	-				-0.3
3,247,215	-				+2.5
3,247,215	-				-1.4
3,247,215	-				-0.7
3,247,215	-				+0.4
3,247,215	-				-0.5
3,247,215	-				+0.5
3,247,215	-				+2.1
3,247,215	-				+0.3
3,247,215	-				+2.3
3,247,215	-				+0.5
3,247,215	-				-1.0
3,247,215	-				-0.1
3,247,215	-				-1.9
3,247,215	-				-0.5
3,247,215	-				-0.5
3,247,313	-				+0.7
3,247,381	+				+0.3
3,247,381	+				+0.3
3,247,381	+				+3.6
3,247,381	+				-0.5
3,247,381	+				+1.3
3,247,381	+				+0.2
3,247,381	+				-0.1
3,247,381	+				-0.0
3,247,381	+				+0.7
3,247,381	+				+0.2
3,247,382	-				+3.3
3,247,382	-				-0.3
3,247,382	-				-0.7
3,247,382	-				+1.1
3,247,382	-				-0.3
3,247,382	-				+0.4
3,247,382	-				-0.3
3,247,382	-				-0.2
3,247,382	-				+0.3
3,247,382	-				-0.4
3,247,382	-				+0.4
3,247,382	-				+0.5
3,247,385	+				+0.1
3,247,385	+				-0.0
3,247,386	-				-0.5
3,247,386	-				+0.9
3,247,386	-				-1.5
3,247,386	-				+0.4
3,247,386	-				-0.2
3,247,386	-				-1.9
3,247,482	+		AO353_14655	0.27	-0.1
3,247,482	+		AO353_14655	0.27	-0.9
3,247,482	+		AO353_14655	0.27	-2.0
3,247,483	-		AO353_14655	0.28	-0.6
3,247,483	-		AO353_14655	0.28	+1.1
3,247,483	-		AO353_14655	0.28	+0.4
3,247,483	-		AO353_14655	0.28	-1.7
3,247,483	-		AO353_14655	0.28	+0.3
3,247,483	-		AO353_14655	0.28	-0.7
3,247,483	-		AO353_14655	0.28	+0.1
3,247,483	-		AO353_14655	0.28	-1.9
3,247,489	+		AO353_14655	0.29	-0.7
3,247,489	+		AO353_14655	0.29	+0.7
3,247,489	+		AO353_14655	0.29	-0.5
3,247,489	+		AO353_14655	0.29	-0.2
3,247,489	+		AO353_14655	0.29	-0.7
3,247,489	+		AO353_14655	0.29	-0.5
3,247,489	+		AO353_14655	0.29	+0.1
3,247,489	+		AO353_14655	0.29	+3.1
3,247,489	+		AO353_14655	0.29	-0.7
3,247,489	+		AO353_14655	0.29	+1.6
3,247,489	+		AO353_14655	0.29	-1.3
3,247,489	+		AO353_14655	0.29	+0.3
3,247,489	+		AO353_14655	0.29	+1.0
3,247,489	+		AO353_14655	0.29	+0.4
3,247,490	-		AO353_14655	0.30	-0.3
3,247,490	-		AO353_14655	0.30	+0.3
3,247,490	-		AO353_14655	0.30	+1.9
3,247,490	-		AO353_14655	0.30	+0.3
3,247,490	-		AO353_14655	0.30	-0.7
3,247,490	-		AO353_14655	0.30	+0.7
3,247,490	-		AO353_14655	0.30	+0.3
3,247,490	-		AO353_14655	0.30	+0.3
3,247,490	-		AO353_14655	0.30	-0.3
3,247,490	-		AO353_14655	0.30	+0.5
3,247,490	-		AO353_14655	0.30	+0.7
3,247,490	-		AO353_14655	0.30	-0.8
3,247,490	-		AO353_14655	0.30	-1.3
3,247,490	-		AO353_14655	0.30	+0.4
3,247,490	-		AO353_14655	0.30	+1.5
3,247,490	-		AO353_14655	0.30	-0.7
3,247,490	-		AO353_14655	0.30	-1.3
3,247,490	-		AO353_14655	0.30	+0.7
3,247,490	-		AO353_14655	0.30	+1.3
3,247,536	+		AO353_14655	0.42	+1.3
3,247,536	+		AO353_14655	0.42	-1.0
3,247,536	+		AO353_14655	0.42	+1.3
3,247,536	+		AO353_14655	0.42	-1.8
3,247,536	+		AO353_14655	0.42	-0.7
3,247,537	-		AO353_14655	0.42	+0.6
3,247,537	-		AO353_14655	0.42	+0.4
3,247,537	-		AO353_14655	0.42	-0.7
3,247,572	+		AO353_14655	0.52	-0.1
3,247,573	-		AO353_14655	0.52	+0.1
3,247,573	-		AO353_14655	0.52	+1.7
3,247,613	-		AO353_14655	0.63	-0.7
3,247,629	-		AO353_14655	0.67	+0.3
3,247,629	-		AO353_14655	0.67	-2.3
3,247,629	-		AO353_14655	0.67	-1.0
3,247,646	-		AO353_14655	0.72	-1.0
3,247,646	-		AO353_14655	0.72	-1.0
3,247,646	-		AO353_14655	0.72	-2.9
3,247,646	-		AO353_14655	0.72	-1.5
3,247,687	-		AO353_14655	0.83	-2.5
3,247,695	+		AO353_14655	0.85	-2.2
3,247,696	-		AO353_14655	0.85	+0.3
3,247,696	-		AO353_14655	0.85	-1.7
3,247,696	-		AO353_14655	0.85	-2.4
3,247,696	-		AO353_14655	0.85	-0.0
3,247,756	+				-1.3
3,247,792	+		AO353_14660	0.12	+0.7
3,247,792	+		AO353_14660	0.12	+2.1
3,247,792	+		AO353_14660	0.12	+0.9
3,247,793	-		AO353_14660	0.13	+0.7
3,247,793	-		AO353_14660	0.13	-1.3
3,247,793	-		AO353_14660	0.13	+1.2
3,247,793	-		AO353_14660	0.13	+1.3
3,247,818	+		AO353_14660	0.21	-0.6
3,247,818	+		AO353_14660	0.21	-2.3
3,247,818	+		AO353_14660	0.21	-0.3
3,247,818	+		AO353_14660	0.21	-0.1
3,247,818	+		AO353_14660	0.21	+1.4
3,247,818	+		AO353_14660	0.21	+1.1
3,247,818	+		AO353_14660	0.21	-0.7
3,247,818	+		AO353_14660	0.21	+1.6
3,247,818	+		AO353_14660	0.21	+2.0
3,247,818	+		AO353_14660	0.21	-0.7
3,247,819	-		AO353_14660	0.21	+1.7
3,247,819	-		AO353_14660	0.21	-0.6
3,247,819	-		AO353_14660	0.21	-0.5
3,247,819	-		AO353_14660	0.21	+2.1
3,247,819	-		AO353_14660	0.21	-0.0
3,247,819	-		AO353_14660	0.21	+0.7
3,247,822	+		AO353_14660	0.22	-0.7
3,247,822	+		AO353_14660	0.22	+0.5
3,247,822	+		AO353_14660	0.22	+1.5
3,247,822	+		AO353_14660	0.22	+1.7
3,247,822	+		AO353_14660	0.22	-1.0
3,247,822	+		AO353_14660	0.22	-0.5
3,247,822	+		AO353_14660	0.22	+0.8
3,247,822	+		AO353_14660	0.22	-1.5
3,247,822	+		AO353_14660	0.22	+1.0
3,247,822	+		AO353_14660	0.22	+1.3
3,247,822	+		AO353_14660	0.22	-2.2
3,247,822	+		AO353_14660	0.22	-2.2
3,247,822	+		AO353_14660	0.22	+1.2
3,247,822	+		AO353_14660	0.22	-0.5
3,247,822	+		AO353_14660	0.22	-0.0
3,247,822	+		AO353_14660	0.22	+2.3
3,247,822	+		AO353_14660	0.22	+0.1
3,247,822	+		AO353_14660	0.22	-1.0
3,247,822	+		AO353_14660	0.22	+2.5
3,247,823	-		AO353_14660	0.22	-0.0
3,247,823	-		AO353_14660	0.22	-2.2
3,247,823	-		AO353_14660	0.22	+0.8
3,247,823	-		AO353_14660	0.22	-0.3
3,247,823	-		AO353_14660	0.22	+0.7
3,247,823	-		AO353_14660	0.22	+0.9
3,247,823	-		AO353_14660	0.22	+0.7
3,247,823	-		AO353_14660	0.22	-0.5
3,247,823	-		AO353_14660	0.22	+1.1
3,247,823	-		AO353_14660	0.22	-0.2
3,247,823	-		AO353_14660	0.22	+1.1
3,247,823	-		AO353_14660	0.22	-1.7
3,247,823	-		AO353_14660	0.22	+0.5
3,247,823	-		AO353_14660	0.22	+0.6
3,247,824	+		AO353_14660	0.23	+1.9
3,247,824	+		AO353_14660	0.23	+0.5
3,247,824	+		AO353_14660	0.23	-1.0
3,247,825	-		AO353_14660	0.23	+0.4
3,247,825	-		AO353_14660	0.23	-0.5
3,247,825	-		AO353_14660	0.23	+0.3
3,247,883	+		AO353_14660	0.42	+2.1
3,247,883	+		AO353_14660	0.42	-0.8
3,247,883	+		AO353_14660	0.42	-1.7
3,247,883	+		AO353_14660	0.42	-1.0
3,247,884	-		AO353_14660	0.43	+1.0
3,247,937	+		AO353_14660	0.60	+0.5
3,247,937	+		AO353_14660	0.60	+0.8
3,247,937	+		AO353_14660	0.60	+0.3
3,247,937	+		AO353_14660	0.60	+0.5
3,247,937	+		AO353_14660	0.60	+0.0
3,247,937	+		AO353_14660	0.60	+1.3
3,247,937	+		AO353_14660	0.60	+1.3
3,247,938	-		AO353_14660	0.60	+1.5
3,247,938	-		AO353_14660	0.60	+0.1
3,247,938	-		AO353_14660	0.60	-0.2
3,247,938	-		AO353_14660	0.60	+1.0
3,247,959	-		AO353_14660	0.67	-0.3
3,248,011	+		AO353_14660	0.84	-0.6
3,248,011	+		AO353_14660	0.84	+0.0
3,248,011	+		AO353_14660	0.84	+0.5
3,248,011	+		AO353_14660	0.84	+0.5
3,248,011	+		AO353_14660	0.84	-0.6
3,248,012	-		AO353_14660	0.85	-1.4
3,248,012	-		AO353_14660	0.85	+1.0
3,248,012	-		AO353_14660	0.85	-0.6
3,248,012	-		AO353_14660	0.85	+1.9
3,248,012	-		AO353_14660	0.85	+1.3
3,248,048	+				+0.3
3,248,048	+				+0.3
3,248,048	+				+0.9
3,248,048	+				-1.0
3,248,049	-				+0.9
3,248,100	+				+1.1
3,248,100	+				-0.1
3,248,100	+				+0.4
3,248,101	-				-2.9
3,248,101	-				-0.7
3,248,101	-				+0.5
3,248,108	+				+1.5
3,248,108	+				+0.8
3,248,108	+				+2.5
3,248,117	-				-0.7
3,248,117	-				-0.3
3,248,117	-				-0.7
3,248,169	+				+0.1
3,248,195	+				+2.9
3,248,195	+				-0.0
3,248,196	-				+2.2
3,248,210	+				+0.1
3,248,211	-				+1.1
3,248,211	-				-1.0
3,248,211	-				+0.2
3,248,211	-				+0.5
3,248,211	-				-2.1
3,248,211	-				+1.3
3,248,211	-				+0.3
3,248,237	+				-1.3
3,248,237	+				-0.7
3,248,237	+				+2.1
3,248,237	+				-0.0
3,248,237	+				-0.7
3,248,237	+				+0.5
3,248,238	-				+1.3
3,248,238	-				+1.1
3,248,238	-				-0.7
3,248,238	-				-1.5
3,248,238	-				+2.0
3,248,238	-				-1.5
3,248,238	-				-1.5
3,248,238	-				-0.4
3,248,238	-				-1.0
3,248,238	-				+0.5
3,248,238	-				-0.0
3,248,238	-				-0.5
3,248,282	+				-0.7
3,248,283	-				+1.3
3,248,283	-				+1.0
3,248,288	+				+0.7
3,248,288	+				-0.6
3,248,288	+				+0.3
3,248,288	+				+0.8
3,248,289	-				-0.5
3,248,289	-				+0.1
3,248,289	-				-0.3
3,248,476	+		AO353_14665	0.15	+1.5
3,248,476	+		AO353_14665	0.15	+0.6
3,248,477	-		AO353_14665	0.15	+0.5
3,248,477	-		AO353_14665	0.15	+0.7
3,248,477	-		AO353_14665	0.15	+0.5
3,248,484	-		AO353_14665	0.15	-1.9
3,248,510	+		AO353_14665	0.19	+0.3
3,248,510	+		AO353_14665	0.19	-0.1
3,248,511	-		AO353_14665	0.19	-1.0
3,248,511	-		AO353_14665	0.19	-0.4
3,248,511	-		AO353_14665	0.19	-1.5
3,248,550	+		AO353_14665	0.23	+0.6
3,248,550	+		AO353_14665	0.23	+0.6
3,248,551	-		AO353_14665	0.24	-1.6
3,248,664	+		AO353_14665	0.37	-0.3
3,248,664	+		AO353_14665	0.37	-0.3
3,248,664	+		AO353_14665	0.37	-0.6
3,248,665	-		AO353_14665	0.37	-0.9
3,248,665	-		AO353_14665	0.37	-1.7
3,248,693	+		AO353_14665	0.41	+1.3
3,248,694	-		AO353_14665	0.41	+0.1