Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13985

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
3,105,549	+		AO353_13980	0.52	+1.8
3,105,549	+		AO353_13980	0.52	-1.2
3,105,549	+		AO353_13980	0.52	+0.4
3,105,549	+		AO353_13980	0.52	-0.5
3,105,549	+		AO353_13980	0.52	+2.2
3,105,549	+		AO353_13980	0.52	+0.0
3,105,550	-		AO353_13980	0.52	-0.8
3,105,550	-		AO353_13980	0.52	-0.0
3,106,195	+				+0.7
3,106,203	+				-2.0
3,106,218	+				-0.1
3,106,218	+				+2.4
3,106,218	+				-2.2
3,106,219	-				+0.9
3,106,219	-				-0.6
3,106,241	+				-0.3
3,106,241	+				-1.8
3,106,241	+				-2.2
3,106,241	+				+0.5
3,106,241	+				+1.0
3,106,241	+				+0.6
3,106,241	+				-0.9
3,106,241	+				+1.0
3,106,242	-				+1.4
3,106,242	-				+0.9
3,106,254	+				-1.6
3,106,254	+				+0.8
3,106,254	+				-0.2
3,106,254	+				+0.6
3,106,254	+				+0.1
3,106,255	-				+0.8
3,106,255	-				-0.8
3,106,255	-				-0.6
3,106,255	-				+2.9
3,106,255	-				-0.2
3,106,255	-				+1.4
3,106,255	-				+0.4
3,106,372	+		AO353_13985	0.35	-0.8
3,106,372	+		AO353_13985	0.35	+1.6
3,106,372	+		AO353_13985	0.35	+0.6
3,106,373	-		AO353_13985	0.35	-1.5
3,106,373	-		AO353_13985	0.35	+0.1
3,106,373	-		AO353_13985	0.35	-0.2
3,106,383	+		AO353_13985	0.38	+0.4
3,106,384	-		AO353_13985	0.38	-0.2
3,106,384	-		AO353_13985	0.38	-0.5
3,106,648	+				+0.4
3,106,648	+				-1.2
3,106,648	+				+0.8
3,106,649	-				-0.6
3,106,650	+				-1.0
3,106,650	+				-2.0
3,106,650	+				+1.0
3,106,650	+				+0.8
3,106,650	+				+1.9
3,106,650	+				-0.7
3,106,650	+				-0.6
3,106,650	+				-1.5
3,106,650	+				+1.1
3,106,650	+				+0.9
3,106,650	+				+0.5
3,106,650	+				-0.5
3,106,651	-				+1.4
3,106,651	-				-1.0
3,106,651	-				-0.5
3,106,651	-				-0.6
3,106,651	-				-0.1
3,106,651	-				+0.2
3,106,651	-				+0.6
3,106,651	-				+0.3
3,106,651	-				+2.0
3,106,691	+				-1.3
3,106,691	+				-0.1
3,106,692	-				-2.1
3,106,692	-				+1.6
3,106,692	-				-1.2
3,106,692	-				-0.0
3,106,692	-				-0.8
3,106,697	+				+1.0
3,106,697	+				-1.2
3,106,698	-				-0.5
3,106,698	-				-1.0
3,106,698	-				+2.7
3,106,698	-				-1.4
3,106,698	-				-0.0
3,106,707	+				-1.2
3,106,725	+				+0.6
3,106,732	-				+2.9
3,106,787	+				-0.2
3,106,788	-				-0.5
3,106,790	+				+0.9
3,106,790	+				-1.3
3,106,791	-				-0.3
3,106,791	-				-1.2
3,106,791	-				+2.4
3,106,791	-				+1.0
3,106,793	+				-1.2
3,106,793	+				+1.4
3,106,793	+				-1.7
3,106,793	+				+1.7
3,106,793	+				-0.4
3,106,794	-				-1.0
3,106,794	-				+2.1
3,106,794	-				+2.4
3,106,794	-				+0.8
3,106,810	+				-0.5
3,106,810	+				+1.4
3,106,810	+				-0.6
3,106,810	+				-0.5
3,106,810	+				+1.0
3,106,810	+				-0.3
3,106,811	-				+0.4
3,106,811	-				+0.9
3,106,811	-				+1.9
3,106,811	-				+0.4
3,106,811	-				+0.6
3,106,811	-				-0.2
3,106,835	-				+2.2
3,106,900	+				+1.1
3,106,900	+				-0.2
3,106,920	+				+0.4
3,106,920	+				-0.5
3,106,920	+				-1.9
3,106,921	-				-0.0
3,106,921	-				+0.1
3,106,921	-				-2.5
3,106,921	-				-0.2
3,106,933	-				-0.5
3,106,938	+				+0.4
3,106,938	+				+0.1
3,106,941	+				-1.2
3,106,941	+				-0.6
3,106,941	+				-0.5
3,106,941	+				-1.2
3,106,941	+				+0.0
3,106,941	+				-0.1
3,106,941	+				+0.4
3,106,941	+				+2.5
3,106,941	+				-0.6
3,106,941	+				+0.8
3,106,941	+				+0.0
3,106,941	+				-0.7
3,106,941	+				+0.4
3,106,941	+				-0.6
3,106,941	+				-0.5
3,106,941	+				+0.2
3,106,941	+				+0.1
3,106,941	+				-0.5
3,106,942	-				+0.8
3,106,942	-				+0.4
3,106,942	-				+1.8
3,106,942	-				-1.5
3,106,942	-				-0.6
3,106,942	-				+0.8
3,106,942	-				+0.6
3,106,942	-				+1.2
3,106,942	-				+1.5
3,106,942	-				-0.9
3,106,942	-				+0.8
3,106,961	+				-0.2
3,106,962	-				+0.5
3,106,962	-				-0.6
3,107,026	-		AO353_13990	0.12	+0.7
3,107,364	-		AO353_13990	0.28	-1.0
3,107,412	+		AO353_13990	0.31	-0.6
3,107,412	+		AO353_13990	0.31	-0.1
3,107,412	+		AO353_13990	0.31	-1.3
3,107,412	+		AO353_13990	0.31	-1.2
3,107,412	+		AO353_13990	0.31	-0.5
3,107,412	+		AO353_13990	0.31	-1.0
3,107,412	+		AO353_13990	0.31	+1.1
3,107,412	+		AO353_13990	0.31	-0.6
3,107,412	+		AO353_13990	0.31	+1.4
3,107,421	+		AO353_13990	0.31	-0.5
3,107,421	+		AO353_13990	0.31	+0.9
3,107,421	+		AO353_13990	0.31	+0.7
3,107,421	+		AO353_13990	0.31	+1.1
3,107,421	+		AO353_13990	0.31	+0.8