Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13200

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,924,880	-				+0.2
2,924,880	-				+0.6
2,924,880	-				+0.2
2,924,880	-				+1.4
2,924,991	-				-0.6
2,925,015	-				-1.0
2,925,015	-				+0.5
2,925,015	-				-0.2
2,925,015	-				+0.7
2,925,094	+				+0.6
2,925,095	-				-1.4
2,925,095	-				+0.4
2,925,095	-				+0.3
2,925,101	+				-0.5
2,925,101	+				+1.6
2,925,101	+				-0.8
2,925,101	+				-0.9
2,925,101	+				-0.6
2,925,101	+				-0.2
2,925,102	-				+0.4
2,925,102	-				+0.4
2,925,102	-				+0.0
2,925,102	-				+1.0
2,925,159	+				-1.2
2,925,159	+				-0.2
2,925,159	+				+0.2
2,925,160	-				+1.9
2,925,387	+				+0.1
2,925,387	+				-2.1
2,925,388	-				+2.2
2,925,389	+				-0.5
2,925,389	+				+0.4
2,925,390	-				+1.4
2,925,390	-				-1.3
2,925,390	-				-0.4
2,925,411	-				+0.4
2,925,423	+				+0.8
2,925,423	+				+1.4
2,925,424	-				+1.0
2,925,429	+				-1.2
2,925,499	-				-0.9
2,925,499	-				+0.2
2,925,499	-				-1.6
2,925,499	-				+0.4
2,925,499	-				+1.0
2,925,499	-				-0.3
2,925,641	-				-0.4
2,925,643	-				+0.3
2,925,664	-				-1.5
2,925,745	-				-1.6
2,925,745	-				+1.1
2,925,745	-				-0.2
2,925,745	-				-1.8
2,925,745	-				-1.3
2,925,785	+				-0.9
2,925,786	-				-1.9
2,925,786	-				+0.7
2,925,786	-				+0.8
2,925,795	+				-1.6
2,925,796	-				+0.1
2,925,804	+				+0.4
2,925,805	-				-0.4
2,925,807	-				-0.6
2,925,807	-				-0.4
2,925,807	-				-0.8
2,925,807	-				+0.2
2,925,807	-				-2.4
2,925,807	-				-0.4
2,925,807	-				-0.1
2,925,807	-				-1.4
2,925,807	-				-1.9
2,925,807	-				-1.8
2,925,807	-				+1.4
2,925,890	+				-0.9
2,925,890	+				-2.4
2,925,890	+				+0.4
2,925,891	-				-0.0
2,925,962	-				-1.8
2,925,962	-				-1.8
2,925,962	-				-0.2
2,926,043	+				-0.6
2,926,043	+				-1.2
2,926,043	+				-0.2
2,926,044	-				-1.8
2,926,044	-				+0.9
2,926,044	-				-2.0
2,926,047	+				-0.6
2,926,047	+				+0.1
2,926,048	-				-0.9
2,926,048	-				-0.2
2,926,048	-				-0.4
2,926,048	-				-0.2
2,926,048	-				-2.0
2,926,065	+				+0.2
2,926,065	+				+1.2
2,926,065	+				-2.4
2,926,076	-				-1.9
2,926,306	-		AO353_13200	0.18	+0.4
2,926,385	+		AO353_13200	0.21	-0.1
2,926,421	-		AO353_13200	0.23	-2.0
2,926,421	-		AO353_13200	0.23	-1.6
2,926,488	+		AO353_13200	0.25	-2.0
2,926,488	+		AO353_13200	0.25	-1.9
2,926,488	+		AO353_13200	0.25	-1.2
2,926,488	+		AO353_13200	0.25	+0.4
2,926,488	+		AO353_13200	0.25	+1.1
2,926,488	+		AO353_13200	0.25	-2.2
2,926,488	+		AO353_13200	0.25	-1.2
2,926,488	+		AO353_13200	0.25	-0.2
2,926,488	+		AO353_13200	0.25	+0.2
2,926,488	+		AO353_13200	0.25	-1.2
2,926,488	+		AO353_13200	0.25	-1.2
2,926,489	-		AO353_13200	0.25	+0.4
2,926,489	-		AO353_13200	0.25	-2.5
2,926,489	-		AO353_13200	0.25	-1.4
2,926,489	-		AO353_13200	0.25	-0.9
2,926,489	-		AO353_13200	0.25	-0.6
2,926,489	-		AO353_13200	0.25	-0.3
2,926,489	-		AO353_13200	0.25	-1.5
2,926,489	-		AO353_13200	0.25	+1.4
2,926,531	-		AO353_13200	0.27	+0.4
2,926,566	-		AO353_13200	0.28	-0.9
2,926,647	-		AO353_13200	0.31	-2.8
2,926,743	+		AO353_13200	0.35	-1.6
2,926,744	-		AO353_13200	0.35	+1.0
2,926,744	-		AO353_13200	0.35	-2.8
2,926,744	-		AO353_13200	0.35	-1.4
2,926,770	+		AO353_13200	0.36	-0.2
2,926,770	+		AO353_13200	0.36	-2.8
2,926,771	-		AO353_13200	0.36	+2.4
2,926,827	+		AO353_13200	0.38	-0.9
2,926,827	+		AO353_13200	0.38	-0.6
2,926,827	+		AO353_13200	0.38	-0.9
2,926,827	+		AO353_13200	0.38	-2.4
2,926,828	-		AO353_13200	0.38	+0.2
2,926,828	-		AO353_13200	0.38	-1.4
2,926,828	-		AO353_13200	0.38	-1.6
2,926,843	+		AO353_13200	0.39	-1.8
2,926,932	-		AO353_13200	0.42	-1.4
2,926,932	-		AO353_13200	0.42	-0.8
2,926,932	-		AO353_13200	0.42	-0.6
2,926,932	-		AO353_13200	0.42	-1.9
2,926,932	-		AO353_13200	0.42	-0.9
2,926,932	-		AO353_13200	0.42	-1.2
2,926,968	+		AO353_13200	0.43	-2.8
2,926,968	+		AO353_13200	0.43	-1.6
2,926,969	-		AO353_13200	0.43	-0.2
2,926,969	-		AO353_13200	0.43	-1.6
2,927,004	+		AO353_13200	0.45	-1.9
2,927,004	+		AO353_13200	0.45	-1.2
2,927,004	+		AO353_13200	0.45	-0.9
2,927,004	+		AO353_13200	0.45	-1.9
2,927,004	+		AO353_13200	0.45	-0.9
2,927,005	-		AO353_13200	0.45	-1.4
2,927,005	-		AO353_13200	0.45	-1.8
2,927,070	+		AO353_13200	0.47	+0.4
2,927,104	-		AO353_13200	0.48	-1.4
2,927,104	-		AO353_13200	0.48	-1.8
2,927,112	+		AO353_13200	0.49	-0.6
2,927,112	+		AO353_13200	0.49	-1.6
2,927,112	+		AO353_13200	0.49	-0.2
2,927,113	-		AO353_13200	0.49	-2.8
2,927,113	-		AO353_13200	0.49	-0.6
2,927,113	-		AO353_13200	0.49	-0.6
2,927,113	-		AO353_13200	0.49	-0.6
2,927,113	-		AO353_13200	0.49	-0.2
2,927,431	-		AO353_13200	0.61	-0.9
2,927,431	-		AO353_13200	0.61	-1.4
2,927,517	+		AO353_13200	0.64	+2.4
2,927,517	+		AO353_13200	0.64	+1.4
2,927,518	-		AO353_13200	0.64	-1.2
2,927,518	-		AO353_13200	0.64	-0.2
2,927,518	-		AO353_13200	0.64	-2.7
2,927,518	-		AO353_13200	0.64	-0.9
2,927,562	+		AO353_13200	0.66	-0.2
2,927,562	+		AO353_13200	0.66	-1.4
2,927,562	+		AO353_13200	0.66	-0.8
2,927,563	-		AO353_13200	0.66	-1.8
2,927,563	-		AO353_13200	0.66	+1.4
2,927,563	-		AO353_13200	0.66	-0.8
2,927,563	-		AO353_13200	0.66	+0.1
2,927,563	-		AO353_13200	0.66	+0.4
2,927,563	-		AO353_13200	0.66	-0.6
2,927,700	+		AO353_13200	0.71	+0.4
2,927,707	-		AO353_13200	0.71	-1.2
2,927,891	+		AO353_13200	0.78	+1.9
2,927,895	+		AO353_13200	0.79	-1.2
2,927,895	+		AO353_13200	0.79	-0.9
2,927,895	+		AO353_13200	0.79	+0.7
2,927,895	+		AO353_13200	0.79	+0.2
2,927,895	+		AO353_13200	0.79	-0.2
2,927,895	+		AO353_13200	0.79	-0.2
2,927,896	-		AO353_13200	0.79	+1.4
2,927,896	-		AO353_13200	0.79	+1.4
2,927,896	-		AO353_13200	0.79	+0.7
2,927,896	-		AO353_13200	0.79	-2.5
2,927,896	-		AO353_13200	0.79	+1.0
2,927,937	+		AO353_13200	0.80	-0.8
2,927,937	+		AO353_13200	0.80	+1.4
2,927,938	-		AO353_13200	0.80	-0.5
2,927,938	-		AO353_13200	0.80	+0.4
2,927,938	-		AO353_13200	0.80	-0.6
2,927,940	+		AO353_13200	0.80	-1.0
2,927,940	+		AO353_13200	0.80	-0.9
2,927,940	+		AO353_13200	0.80	-0.8
2,927,941	-		AO353_13200	0.80	+2.0
2,927,941	-		AO353_13200	0.80	+0.7
2,928,247	+				+0.3
2,928,247	+				+0.7
2,928,247	+				+0.8
2,928,248	-				+0.4
2,928,248	-				+1.5
2,928,251	+				-0.2
2,928,251	+				+2.7
2,928,251	+				+0.3
2,928,251	+				+0.3
2,928,251	+				-0.6
2,928,251	+				+0.7
2,928,252	-				-0.4
2,928,252	-				+0.5
2,928,252	-				-1.9
2,928,303	-				-0.4
2,928,360	-				-1.8
2,928,377	+				-2.3
2,928,377	+				+1.0
2,928,377	+				+0.9
2,928,377	+				+0.4
2,928,378	-				+2.4
2,928,378	-				-1.4
2,928,378	-				-1.0
2,928,378	-				+2.5
2,928,378	-				+0.4
2,928,378	-				+1.7
2,928,378	-				+0.6
2,928,386	+				-0.2
2,928,386	+				+1.6
2,928,387	-				+1.2
2,928,443	+				-0.8
2,928,444	-				+1.7
2,928,444	-				-0.9
2,928,492	+				+0.4
2,928,492	+				+1.2
2,928,493	-				+0.4
2,928,493	-				+0.4
2,928,493	-				+0.6
2,928,493	-				+0.1
2,928,493	-				+0.1
2,928,493	-				+1.1
2,928,493	-				+1.2
2,928,678	+		AO353_13205	0.29	-2.0
2,928,678	+		AO353_13205	0.29	-2.0
2,928,678	+		AO353_13205	0.29	+0.2
2,928,679	-		AO353_13205	0.29	+1.8
2,928,679	-		AO353_13205	0.29	+1.2
2,928,679	-		AO353_13205	0.29	-0.3
2,928,679	-		AO353_13205	0.29	-2.0
2,928,877	+		AO353_13205	0.55	-1.6
2,928,877	+		AO353_13205	0.55	-0.2
2,928,877	+		AO353_13205	0.55	+2.7
2,928,877	+		AO353_13205	0.55	+0.4
2,928,878	-		AO353_13205	0.55	+0.4
2,928,878	-		AO353_13205	0.55	-1.4
2,929,007	+		AO353_13205	0.72	+0.5
2,929,007	+		AO353_13205	0.72	-1.2
2,929,007	+		AO353_13205	0.72	-0.7
2,929,007	+		AO353_13205	0.72	+1.4
2,929,007	+		AO353_13205	0.72	+0.9
2,929,008	-		AO353_13205	0.72	+0.3
2,929,008	-		AO353_13205	0.72	+1.1
2,929,008	-		AO353_13205	0.72	+1.1
2,929,095	-		AO353_13205	0.83	-0.6
2,929,095	-		AO353_13205	0.83	+0.4
2,929,095	-		AO353_13205	0.83	+0.3
2,929,287	+				+0.8
2,929,287	+				-0.7
2,929,384	+				-0.9