Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12960

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,869,884	+				-0.4
2,869,884	+				+1.0
2,869,884	+				-0.6
2,869,884	+				+1.8
2,869,960	+				-1.4
2,869,972	+				+2.4
2,869,972	+				+0.0
2,869,972	+				-0.1
2,869,972	+				+0.7
2,869,972	+				-1.5
2,869,972	+				-0.9
2,869,972	+				-0.2
2,869,973	-				-0.5
2,869,973	-				+0.1
2,869,973	-				-0.4
2,869,973	-				-0.6
2,869,973	-				-0.6
2,869,976	+				+1.4
2,869,976	+				-0.4
2,869,976	+				-1.2
2,869,976	+				-1.6
2,869,976	+				+0.6
2,869,976	+				+0.3
2,869,976	+				+0.9
2,869,976	+				+0.7
2,869,976	+				+0.7
2,869,976	+				-0.2
2,869,976	+				+1.7
2,869,976	+				-1.0
2,869,976	+				-1.7
2,869,977	-				-0.2
2,869,977	-				+0.4
2,869,977	-				-0.5
2,869,977	-				-0.4
2,869,977	-				-0.7
2,869,977	-				-1.0
2,869,977	-				-0.6
2,869,990	+				-0.7
2,869,991	-				-1.9
2,869,991	-				+0.6
2,869,994	+				-0.2
2,869,994	+				+0.4
2,869,995	-				+0.2
2,869,995	-				+0.7
2,869,995	-				+1.0
2,869,995	-				-1.7
2,870,016	+				-1.4
2,870,017	-				-0.9
2,870,104	+				+0.2
2,870,105	-				-1.7
2,870,105	-				-0.1
2,870,123	+				+0.1
2,870,123	+				-1.2
2,870,124	-				-2.4
2,870,124	-				+0.4
2,870,190	-		AO353_12960	0.16	-1.0
2,870,310	+		AO353_12960	0.33	+1.7
2,870,311	-		AO353_12960	0.33	-0.2
2,870,316	+		AO353_12960	0.34	-0.9
2,870,340	+		AO353_12960	0.37	+0.6
2,870,340	+		AO353_12960	0.37	+0.4
2,870,340	+		AO353_12960	0.37	+0.2
2,870,341	-		AO353_12960	0.37	-2.7
2,870,341	-		AO353_12960	0.37	-0.7
2,870,341	-		AO353_12960	0.37	+2.3
2,870,341	-		AO353_12960	0.37	-1.9
2,870,341	-		AO353_12960	0.37	-1.0
2,870,391	+		AO353_12960	0.44	+1.1
2,870,392	-		AO353_12960	0.44	-0.2
2,870,392	-		AO353_12960	0.44	-2.2
2,870,401	-		AO353_12960	0.46	-1.0
2,870,401	-		AO353_12960	0.46	-0.2
2,870,406	+		AO353_12960	0.46	-1.2
2,870,406	+		AO353_12960	0.46	-0.3
2,870,406	+		AO353_12960	0.46	-0.3
2,870,406	+		AO353_12960	0.46	-1.4
2,870,406	+		AO353_12960	0.46	+1.6
2,870,406	+		AO353_12960	0.46	-0.6
2,870,406	+		AO353_12960	0.46	-0.6
2,870,407	-		AO353_12960	0.47	-1.9
2,870,407	-		AO353_12960	0.47	+0.1
2,870,407	-		AO353_12960	0.47	+0.0
2,870,407	-		AO353_12960	0.47	+0.1
2,870,407	-		AO353_12960	0.47	-1.7
2,870,407	-		AO353_12960	0.47	-3.2
2,870,407	-		AO353_12960	0.47	-1.3
2,870,595	+		AO353_12960	0.73	+1.8
2,870,672	+		AO353_12960	0.84	+1.4
2,870,672	+		AO353_12960	0.84	-0.2
2,870,672	+		AO353_12960	0.84	-1.4
2,870,672	+		AO353_12960	0.84	+0.2
2,870,672	+		AO353_12960	0.84	-1.3
2,870,672	+		AO353_12960	0.84	-0.6
2,870,673	-		AO353_12960	0.84	-1.9
2,870,673	-		AO353_12960	0.84	-1.9
2,870,673	-		AO353_12960	0.84	-2.0
2,870,737	+				+1.4
2,870,761	-				-0.9
2,870,761	-				+1.4
2,870,761	-				+0.4
2,870,776	-				-1.4
2,870,776	-				-1.6
2,871,057	+		AO353_12965	0.46	-0.2
2,871,057	+		AO353_12965	0.46	-0.3
2,871,057	+		AO353_12965	0.46	+0.1
2,871,058	-		AO353_12965	0.46	-1.2
2,871,058	-		AO353_12965	0.46	+0.6
2,871,182	+		AO353_12965	0.66	+0.4
2,871,182	+		AO353_12965	0.66	+0.1
2,871,182	+		AO353_12965	0.66	-2.3
2,871,182	+		AO353_12965	0.66	-0.2
2,871,182	+		AO353_12965	0.66	-1.2
2,871,182	+		AO353_12965	0.66	-0.2
2,871,182	+		AO353_12965	0.66	+0.0
2,871,182	+		AO353_12965	0.66	+0.1
2,871,182	+		AO353_12965	0.66	-0.3
2,871,182	+		AO353_12965	0.66	+1.9
2,871,182	+		AO353_12965	0.66	-0.5
2,871,182	+		AO353_12965	0.66	-0.3
2,871,182	+		AO353_12965	0.66	-0.7
2,871,182	+		AO353_12965	0.66	+0.7
2,871,182	+		AO353_12965	0.66	+0.1
2,871,182	+		AO353_12965	0.66	-0.3
2,871,182	+		AO353_12965	0.66	-1.9
2,871,182	+		AO353_12965	0.66	-1.4
2,871,182	+		AO353_12965	0.66	-0.6
2,871,182	+		AO353_12965	0.66	+0.8
2,871,182	+		AO353_12965	0.66	-1.2
2,871,182	+		AO353_12965	0.66	-0.6
2,871,182	+		AO353_12965	0.66	+1.0
2,871,182	+		AO353_12965	0.66	-0.3
2,871,182	+		AO353_12965	0.66	-1.4
2,871,183	-				+1.4
2,871,183	-		AO353_12965	0.67	-0.3
2,871,183	-		AO353_12965	0.67	-2.5
2,871,183	-		AO353_12965	0.67	-1.7
2,871,183	-		AO353_12965	0.67	+0.6
2,871,183	-		AO353_12965	0.67	-1.1
2,871,183	-		AO353_12965	0.67	+2.2
2,871,183	-		AO353_12965	0.67	+2.1
2,871,183	-		AO353_12965	0.67	+1.2
2,871,183	-		AO353_12965	0.67	-0.2
2,871,183	-		AO353_12965	0.67	-2.0
2,871,183	-		AO353_12965	0.67	+0.9
2,871,183	-		AO353_12965	0.67	-0.6
2,871,183	-		AO353_12965	0.67	-0.3
2,871,183	-		AO353_12965	0.67	-0.8
2,871,183	-		AO353_12965	0.67	-0.2
2,871,183	-		AO353_12965	0.67	+0.4
2,871,183	-		AO353_12965	0.67	+0.7
2,871,183	-		AO353_12965	0.67	-0.5
2,871,184	+		AO353_12965	0.67	+2.2
2,871,184	+		AO353_12965	0.67	+0.7
2,871,184	+		AO353_12965	0.67	-0.4
2,871,184	+		AO353_12965	0.67	-0.2
2,871,184	+		AO353_12965	0.67	+0.3
2,871,184	+		AO353_12965	0.67	-0.9
2,871,184	+		AO353_12965	0.67	-0.7
2,871,184	+		AO353_12965	0.67	-3.1
2,871,184	+		AO353_12965	0.67	-1.8
2,871,184	+		AO353_12965	0.67	-0.7
2,871,184	+		AO353_12965	0.67	-0.2
2,871,184	+		AO353_12965	0.67	-0.3
2,871,184	+		AO353_12965	0.67	+0.8
2,871,184	+		AO353_12965	0.67	-0.4
2,871,184	+		AO353_12965	0.67	+0.1
2,871,184	+		AO353_12965	0.67	-0.2
2,871,184	+		AO353_12965	0.67	+1.4
2,871,184	+		AO353_12965	0.67	+0.4
2,871,184	+		AO353_12965	0.67	+0.8
2,871,185	-		AO353_12965	0.67	-0.2
2,871,185	-		AO353_12965	0.67	-1.2
2,871,185	-		AO353_12965	0.67	+1.2
2,871,185	-		AO353_12965	0.67	-1.7
2,871,185	-		AO353_12965	0.67	-0.3
2,871,185	-		AO353_12965	0.67	+1.2
2,871,185	-		AO353_12965	0.67	+0.4
2,871,185	-		AO353_12965	0.67	+0.1
2,871,185	-		AO353_12965	0.67	-1.2
2,871,185	-		AO353_12965	0.67	-1.3
2,871,185	-		AO353_12965	0.67	+0.3
2,871,185	-		AO353_12965	0.67	-1.5
2,871,185	-		AO353_12965	0.67	-0.9
2,871,185	-		AO353_12965	0.67	-1.1
2,871,185	-		AO353_12965	0.67	+0.6
2,871,185	-		AO353_12965	0.67	-1.4
2,871,185	-		AO353_12965	0.67	+0.5
2,871,185	-		AO353_12965	0.67	-1.2
2,871,185	-		AO353_12965	0.67	-1.2
2,871,185	-		AO353_12965	0.67	+0.2
2,871,185	-		AO353_12965	0.67	-0.4
2,871,185	-		AO353_12965	0.67	+0.2
2,871,185	-		AO353_12965	0.67	+0.3
2,871,235	+		AO353_12965	0.75	-0.3
2,871,235	+		AO353_12965	0.75	+0.3
2,871,235	+		AO353_12965	0.75	-0.3
2,871,235	+		AO353_12965	0.75	-0.6
2,871,235	+		AO353_12965	0.75	+1.1
2,871,236	-		AO353_12965	0.75	+0.7
2,871,236	-		AO353_12965	0.75	+0.0
2,871,236	-		AO353_12965	0.75	+0.0
2,871,236	-		AO353_12965	0.75	+0.6
2,871,289	+		AO353_12965	0.84	-0.8
2,871,289	+		AO353_12965	0.84	+0.1
2,871,290	-		AO353_12965	0.84	+0.1
2,871,290	-		AO353_12965	0.84	+0.3
2,871,338	+				-0.4
2,871,338	+				+0.2
2,871,338	+				-2.2
2,871,338	+				+1.2
2,871,338	+				+0.6
2,871,338	+				-0.7
2,871,338	+				+0.8
2,871,339	-				-0.2
2,871,339	-				+0.8
2,871,339	-				-0.2
2,871,339	-				-1.0
2,871,339	-				-0.2
2,871,339	-				+0.4
2,871,394	+				-0.1
2,871,395	-				+0.2
2,871,395	-				-0.6
2,871,402	+				-2.3
2,871,402	+				-0.2
2,871,402	+				+0.4
2,871,402	+				-0.8
2,871,402	+				-2.0
2,871,402	+				-1.5
2,871,430	+				+1.2
2,871,430	+				-0.7
2,871,430	+				+0.4
2,871,431	-				+1.2
2,871,451	+				-1.5
2,871,451	+				-1.2
2,871,476	+				+1.3
2,871,476	+				+0.6
2,871,476	+				-0.2