Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12150

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,667,210	+		AO353_12145	0.45	-0.3
2,667,210	+		AO353_12145	0.45	+0.5
2,667,211	-		AO353_12145	0.45	-1.3
2,667,419	-		AO353_12145	0.60	-0.8
2,667,693	+		AO353_12145	0.79	-1.5
2,667,694	-		AO353_12145	0.79	+0.7
2,667,694	-		AO353_12145	0.79	-1.5
2,667,694	-		AO353_12145	0.79	-0.1
2,667,714	+		AO353_12145	0.80	-0.1
2,667,714	+		AO353_12145	0.80	+1.0
2,667,952	+				-0.6
2,667,953	-				+0.6
2,667,953	-				-0.1
2,667,989	-				+0.6
2,668,329	+		AO353_12150	0.31	-0.1
2,668,329	+		AO353_12150	0.31	-1.5
2,668,401	-		AO353_12150	0.37	-2.8
2,668,533	+		AO353_12150	0.50	+0.4
2,668,534	-		AO353_12150	0.50	-2.1
2,668,534	-		AO353_12150	0.50	-0.7
2,668,534	-		AO353_12150	0.50	-1.2
2,668,534	-		AO353_12150	0.50	-1.8
2,668,571	+		AO353_12150	0.53	-1.4
2,668,571	+		AO353_12150	0.53	+1.0
2,668,571	+		AO353_12150	0.53	-1.1
2,668,571	+		AO353_12150	0.53	-2.2
2,668,571	+		AO353_12150	0.53	+0.5
2,668,572	-		AO353_12150	0.53	-1.7
2,668,799	+		AO353_12150	0.74	-1.8
2,668,799	+		AO353_12150	0.74	-1.8
2,668,800	-		AO353_12150	0.74	+0.3
2,668,800	-		AO353_12150	0.74	-1.3
2,668,893	+		AO353_12150	0.83	+0.1
2,668,893	+		AO353_12150	0.83	-0.8
2,668,894	-		AO353_12150	0.83	-1.4
2,668,991	+				-1.3
2,668,991	+				-0.5
2,668,991	+				-0.7
2,668,991	+				-1.5
2,668,991	+				+0.5
2,668,991	+				-1.3
2,668,991	+				-0.2
2,668,991	+				-0.8
2,668,991	+				-1.1
2,668,991	+				-0.8
2,668,991	+				-0.8
2,668,991	+				+0.2
2,668,992	-				-1.8
2,668,992	-				+2.1
2,668,992	-				-0.8
2,668,992	-				+0.3
2,668,992	-				+1.2
2,668,992	-				-2.2
2,668,992	-				-1.5
2,668,992	-				-0.7
2,668,992	-				-0.8
2,668,992	-				-0.5
2,668,992	-				-0.3
2,669,047	+				-0.5
2,669,048	-				+0.5
2,669,048	-				-0.8
2,669,080	+				+0.9
2,669,080	+				+0.7
2,669,081	-				-0.1
2,669,081	-				+1.2
2,669,145	+				+1.3
2,669,145	+				-1.1
2,669,146	-				-0.5
2,669,214	-				-0.3
2,669,278	-				-2.2
2,669,284	-				+0.3
2,669,306	+				-0.4
2,669,306	+				+0.1
2,669,307	-				-0.8
2,669,308	+				-0.6
2,669,308	+				-0.5
2,669,309	-				-0.7
2,669,309	-				-1.0
2,669,309	-				-1.3
2,669,309	-				-1.8
2,669,309	-				+0.5
2,669,309	-				-1.3
2,669,309	-				-1.7
2,669,372	+				-0.5
2,669,453	+		AO353_12155	0.20	-2.0
2,669,453	+		AO353_12155	0.20	-0.3
2,669,453	+		AO353_12155	0.20	-0.8
2,669,453	+		AO353_12155	0.20	+1.2
2,669,453	+		AO353_12155	0.20	-0.3
2,669,453	+		AO353_12155	0.20	-2.2
2,669,454	-		AO353_12155	0.20	-1.2
2,669,454	-		AO353_12155	0.20	-1.4
2,669,454	-		AO353_12155	0.20	-0.1
2,669,454	-		AO353_12155	0.20	-0.0
2,669,454	-		AO353_12155	0.20	+0.8
2,669,454	-		AO353_12155	0.20	-1.5
2,669,454	-		AO353_12155	0.20	-0.2
2,669,549	+		AO353_12155	0.36	+0.0
2,669,549	+		AO353_12155	0.36	-1.1
2,669,549	+		AO353_12155	0.36	-0.8
2,669,550	-		AO353_12155	0.36	+1.3
2,669,607	+		AO353_12155	0.46	+0.8
2,669,713	-		AO353_12155	0.63	+1.0
2,669,728	+		AO353_12155	0.66	-2.8
2,669,728	+		AO353_12155	0.66	+0.9
2,669,775	+		AO353_12155	0.73	-1.0
2,669,807	+		AO353_12155	0.79	-1.0
2,669,807	+		AO353_12155	0.79	+0.5
2,669,807	+		AO353_12155	0.79	+1.7
2,669,807	+		AO353_12155	0.79	+0.2
2,669,807	+		AO353_12155	0.79	+1.2
2,669,808	-		AO353_12155	0.79	-1.3
2,669,808	-		AO353_12155	0.79	-0.0
2,669,887	+				+0.2
2,669,887	+				-1.5
2,669,887	+				-0.3
2,669,887	+				-1.3
2,669,887	+				+3.1
2,669,887	+				-2.2
2,669,888	-				-0.8
2,669,888	-				-0.5
2,669,888	-				+0.9
2,669,888	-				-0.5
2,669,888	-				-0.6
2,669,888	-				+0.1
2,669,888	-				-0.6
2,669,888	-				+0.3
2,669,888	-				-2.0
2,669,888	-				+0.7
2,669,893	+				-0.8
2,669,893	+				+1.3
2,669,893	+				+0.7
2,669,893	+				-0.1
2,669,893	+				+2.2
2,669,893	+				+0.6
2,669,894	-				-0.1
2,669,894	-				+4.6
2,669,894	-				-0.0
2,669,894	-				-1.5
2,669,894	-				+1.5
2,669,894	-				-1.8
2,669,894	-				+0.3
2,669,894	-				+0.6
2,669,894	-				-0.8
2,669,894	-				-2.3
2,669,894	-				+0.9
2,669,943	+				+0.6
2,669,966	+				-0.1