Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11925

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,629,714	+		AO353_11915	0.71	-1.3
2,629,714	+		AO353_11915	0.71	-1.1
2,629,714	+		AO353_11915	0.71	-0.4
2,629,714	+		AO353_11915	0.71	-1.3
2,629,714	+		AO353_11915	0.71	+0.8
2,629,714	+		AO353_11915	0.71	+1.1
2,629,714	+		AO353_11915	0.71	-2.4
2,629,714	+		AO353_11915	0.71	+0.3
2,629,714	+		AO353_11915	0.71	+0.5
2,629,714	+		AO353_11915	0.71	-0.4
2,629,715	-		AO353_11915	0.72	-1.3
2,629,832	+		AO353_11915	0.82	-0.8
2,629,832	+		AO353_11915	0.82	-0.3
2,629,832	+		AO353_11915	0.82	-0.7
2,629,832	+		AO353_11915	0.82	-1.3
2,629,832	+		AO353_11915	0.82	+0.5
2,629,833	-		AO353_11915	0.82	-0.2
2,629,833	-		AO353_11915	0.82	-1.1
2,629,833	-		AO353_11915	0.82	+1.8
2,629,996	+				-0.7
2,630,039	+				-1.1
2,630,039	+				-1.3
2,630,039	+				-0.5
2,630,040	-				+0.1
2,630,040	-				-0.1
2,630,073	-				+0.8
2,630,073	-				-1.5
2,630,097	+				-0.1
2,630,098	-				+0.1
2,630,098	-				+0.7
2,630,101	+				-1.1
2,630,102	-				-0.5
2,630,102	-				-0.1
2,630,115	+				-1.0
2,630,116	-				+0.1
2,630,116	-				+2.0
2,630,116	-				+1.5
2,630,116	-				+0.8
2,630,134	+				+0.1
2,630,134	+				+1.1
2,630,135	-				+1.0
2,630,137	-				+0.5
2,630,169	+				-2.7
2,630,169	+				+1.7
2,630,170	-				+0.5
2,630,178	+				-1.3
2,630,178	+				-0.4
2,630,179	-				-0.5
2,630,179	-				+0.8
2,630,179	-				+0.9
2,630,179	-				-1.1
2,630,207	+				-2.0
2,630,207	+				-2.8
2,630,207	+				+0.5
2,630,208	-				+0.7
2,630,208	-				-0.1
2,630,228	+				+0.2
2,630,229	-				-2.3
2,630,229	-				-0.9
2,630,229	-				-1.8
2,630,229	-				+0.9
2,630,239	+				-1.5
2,630,239	+				-1.3
2,630,239	+				-0.1
2,630,239	+				-0.5
2,630,239	+				+0.6
2,630,240	-				+0.0
2,630,240	-				+1.2
2,630,282	+				+0.8
2,630,282	+				-0.4
2,630,282	+				+1.5
2,630,282	+				-0.2
2,630,282	+				-3.1
2,630,283	-				-0.5
2,630,283	-				-0.5
2,630,428	+		AO353_11920	0.75	+0.2
2,630,428	+		AO353_11920	0.75	-0.8
2,630,428	+		AO353_11920	0.75	-0.1
2,630,428	+		AO353_11920	0.75	+0.5
2,630,429	-		AO353_11920	0.76	-1.4
2,630,429	-		AO353_11920	0.76	-1.0
2,630,493	+				-0.8
2,630,494	-				-1.7
2,630,606	-				+0.4
2,630,606	-				+1.2
2,630,606	-				-0.1
2,630,616	-				+0.5
2,630,639	+				+2.2
2,630,639	+				-0.1
2,630,639	+				-0.5
2,630,639	+				-0.5
2,630,639	+				+0.3
2,630,640	-				+0.6
2,630,640	-				-0.3
2,630,645	+				-0.1
2,630,645	+				+0.4
2,630,645	+				-2.7
2,630,645	+				-2.0
2,630,646	-				+1.5
2,630,646	-				-0.8
2,630,646	-				+0.1
2,630,646	-				+0.1
2,630,646	-				-1.3
2,630,646	-				-1.5
2,630,646	-				+1.5
2,630,646	-				+0.5
2,630,646	-				-2.3
2,630,646	-				+0.5
2,630,646	-				+0.5
2,630,646	-				+0.3
2,630,694	+				-0.6
2,630,710	+				-0.7
2,630,710	+				-0.4
2,630,710	+				-0.8
2,630,710	+				-0.0
2,630,710	+				-0.8
2,630,710	+				+0.5
2,630,710	+				+1.3
2,630,710	+				-0.5
2,630,710	+				-1.3
2,630,710	+				-0.2
2,630,710	+				+0.7
2,630,710	+				-1.8
2,630,710	+				-0.3
2,630,710	+				-0.3
2,630,710	+				-0.8
2,630,710	+				+0.1
2,630,710	+				+0.5
2,630,710	+				-0.8
2,630,710	+				-0.1
2,630,710	+				+2.0
2,630,710	+				-1.5
2,630,710	+				-0.1
2,630,710	+				-1.5
2,630,710	+				-0.1
2,630,710	+				-2.1
2,630,710	+				-0.1
2,630,710	+				-3.5
2,630,711	-				+0.9
2,630,711	-				-1.5
2,630,711	-				-0.2
2,630,711	-				+0.0
2,630,711	-				+0.8
2,630,711	-				+1.9
2,630,711	-				-1.5
2,630,711	-				-0.3
2,630,711	-				+0.1
2,630,711	-				-0.8
2,630,711	-				+0.6
2,630,711	-				+0.4
2,630,711	-				-0.7
2,630,711	-				-0.5
2,630,711	-				-2.9
2,630,711	-				+1.5
2,630,711	-				+0.7
2,630,711	-				+1.2
2,630,711	-				+0.1
2,630,711	-				+0.4
2,630,711	-				+2.0
2,630,711	-				+0.3
2,630,711	-				-1.7
2,630,711	-				+0.9
2,630,711	-				-0.3
2,630,711	-				-1.3
2,630,711	-				+0.9
2,630,711	-				-0.1
2,630,711	-				+1.0
2,630,711	-				+0.7
2,630,711	-				-1.7
2,630,711	-				+1.5
2,630,711	-				-0.8
2,630,716	+				+1.3
2,630,716	+				-2.0
2,630,716	+				-1.6
2,630,716	+				+0.5
2,630,716	+				-1.7
2,630,716	+				-1.1
2,630,716	+				+0.1
2,630,716	+				+0.5
2,630,716	+				-0.5
2,630,716	+				+0.1
2,630,716	+				-1.2
2,630,716	+				-1.2
2,630,716	+				+1.5
2,630,717	-				+0.5
2,630,717	-				-0.5
2,630,717	-				+1.5
2,630,717	-				+1.2
2,630,717	-				-0.1
2,630,717	-				+0.1
2,630,717	-				+1.1
2,630,717	-				+1.0
2,630,717	-				+0.5
2,630,717	-				+0.2
2,630,741	-				-0.2
2,630,741	-				-0.0
2,630,854	+		AO353_11925	0.24	-0.1
2,630,854	+		AO353_11925	0.24	+0.8
2,630,854	+		AO353_11925	0.24	+0.9
2,630,854	+		AO353_11925	0.24	+0.5
2,630,855	-		AO353_11925	0.24	+1.9
2,630,855	-		AO353_11925	0.24	-0.1
2,630,855	-		AO353_11925	0.24	+0.5
2,630,855	-		AO353_11925	0.24	-1.1
2,630,887	+		AO353_11925	0.28	+0.2
2,630,887	+		AO353_11925	0.28	+2.2
2,630,887	+		AO353_11925	0.28	-0.7
2,630,887	+		AO353_11925	0.28	-1.1
2,630,888	-		AO353_11925	0.29	+0.5
2,630,888	-		AO353_11925	0.29	+0.2
2,630,914	+		AO353_11925	0.32	+0.2
2,630,914	+		AO353_11925	0.32	-0.4
2,630,914	+		AO353_11925	0.32	+0.4
2,630,914	+		AO353_11925	0.32	+0.8
2,630,914	+		AO353_11925	0.32	-1.0
2,630,915	-		AO353_11925	0.32	+2.1
2,630,915	-		AO353_11925	0.32	+1.1
2,630,915	-		AO353_11925	0.32	+0.6
2,631,043	+		AO353_11925	0.51	-1.0
2,631,043	+		AO353_11925	0.51	+0.5
2,631,043	+		AO353_11925	0.51	+0.5
2,631,043	+		AO353_11925	0.51	-2.0
2,631,043	+		AO353_11925	0.51	+1.8
2,631,044	-		AO353_11925	0.51	+0.8
2,631,044	-		AO353_11925	0.51	+0.4
2,631,044	-		AO353_11925	0.51	-1.1
2,631,044	-		AO353_11925	0.51	-0.1
2,631,044	-		AO353_11925	0.51	-1.0
2,631,044	-		AO353_11925	0.51	+0.5
2,631,044	-		AO353_11925	0.51	-0.5
2,631,280	-		AO353_11925	0.85	+0.0
2,631,395	+				-2.1
2,631,440	+				+1.5
2,631,440	+				+1.5
2,631,440	+				+0.9
2,631,440	+				-1.7
2,631,440	+				-0.1
2,631,440	+				-1.5
2,631,440	+				-0.3
2,631,440	+				-0.4
2,631,440	+				-0.4
2,631,440	+				-0.3
2,631,440	+				-0.4
2,631,441	-				+0.3
2,631,441	-				+1.5
2,631,441	-				+1.5
2,631,441	-				-0.1
2,631,441	-				+0.5
2,631,441	-				-0.1
2,631,441	-				-1.1
2,631,441	-				-0.5
2,631,441	-				-1.5
2,631,441	-				-0.1
2,631,441	-				+0.9
2,631,441	-				+0.5
2,631,441	-				-1.5
2,631,441	-				+0.5
2,631,441	-				-2.2
2,631,441	-				-0.8
2,631,441	-				+0.2
2,631,441	-				-1.3
2,631,441	-				-1.4
2,631,542	+		AO353_11930	0.33	+0.9
2,631,542	+		AO353_11930	0.33	+0.8
2,631,542	+		AO353_11930	0.33	-1.3
2,631,542	+		AO353_11930	0.33	-0.3
2,631,542	+		AO353_11930	0.33	+1.3
2,631,542	+		AO353_11930	0.33	-1.7
2,631,542	+		AO353_11930	0.33	+0.8
2,631,542	+		AO353_11930	0.33	+0.4
2,631,542	+		AO353_11930	0.33	-0.1
2,631,542	+		AO353_11930	0.33	+1.5
2,631,542	+		AO353_11930	0.33	-0.8
2,631,542	+		AO353_11930	0.33	+0.3
2,631,542	+		AO353_11930	0.33	-0.5
2,631,542	+		AO353_11930	0.33	+1.5
2,631,543	-		AO353_11930	0.34	+0.2
2,631,543	-		AO353_11930	0.34	-2.1
2,631,543	-		AO353_11930	0.34	-0.9
2,631,543	-		AO353_11930	0.34	+1.2
2,631,543	-		AO353_11930	0.34	-0.1
2,631,543	-		AO353_11930	0.34	+0.2
2,631,543	-		AO353_11930	0.34	+0.9
2,631,543	-		AO353_11930	0.34	+1.7
2,631,543	-		AO353_11930	0.34	-1.4
2,631,543	-		AO353_11930	0.34	-1.8
2,631,543	-		AO353_11930	0.34	-0.8
2,631,543	-		AO353_11930	0.34	-2.0
2,631,543	-		AO353_11930	0.34	-0.8
2,631,543	-		AO353_11930	0.34	+1.5
2,631,543	-		AO353_11930	0.34	-0.9
2,631,543	-		AO353_11930	0.34	-1.8
2,631,543	-		AO353_11930	0.34	-1.3
2,631,626	+		AO353_11930	0.55	+0.0
2,631,626	+		AO353_11930	0.55	+1.7
2,631,626	+		AO353_11930	0.55	+0.2
2,631,626	+		AO353_11930	0.55	-1.5
2,631,626	+		AO353_11930	0.55	-2.1
2,631,626	+		AO353_11930	0.55	-1.4
2,631,626	+		AO353_11930	0.55	-1.0
2,631,626	+		AO353_11930	0.55	-0.9
2,631,626	+		AO353_11930	0.55	+0.7
2,631,626	+		AO353_11930	0.55	+0.8
2,631,626	+		AO353_11930	0.55	-0.5
2,631,626	+		AO353_11930	0.55	+1.9
2,631,626	+		AO353_11930	0.55	-0.1
2,631,626	+		AO353_11930	0.55	+0.2
2,631,626	+		AO353_11930	0.55	+0.7
2,631,626	+		AO353_11930	0.55	-1.5
2,631,626	+		AO353_11930	0.55	-0.8
2,631,627	-		AO353_11930	0.55	-0.5
2,631,627	-		AO353_11930	0.55	+1.1
2,631,627	-		AO353_11930	0.55	-1.5
2,631,627	-		AO353_11930	0.55	+1.1
2,631,627	-		AO353_11930	0.55	-1.8
2,631,627	-		AO353_11930	0.55	+0.3
2,631,627	-		AO353_11930	0.55	+0.8
2,631,627	-		AO353_11930	0.55	+1.0
2,631,627	-		AO353_11930	0.55	-0.4
2,631,627	-		AO353_11930	0.55	-0.5
2,631,627	-		AO353_11930	0.55	-0.2
2,631,627	-		AO353_11930	0.55	+0.1
2,631,627	-		AO353_11930	0.55	-1.3
2,631,627	-		AO353_11930	0.55	+0.5
2,631,648	+		AO353_11930	0.60	-1.1
2,631,648	+		AO353_11930	0.60	-1.1
2,631,648	+		AO353_11930	0.60	-1.1
2,631,648	+		AO353_11930	0.60	-0.7
2,631,648	+		AO353_11930	0.60	+0.1
2,631,649	-		AO353_11930	0.60	-1.1
2,631,649	-		AO353_11930	0.60	+0.5
2,631,666	-		AO353_11930	0.65	-1.1
2,631,666	-		AO353_11930	0.65	+1.7
2,631,666	-		AO353_11930	0.65	+1.5
2,631,666	-		AO353_11930	0.65	-0.9
2,631,677	+		AO353_11930	0.67	-0.8
2,631,677	+		AO353_11930	0.67	+0.7
2,631,677	+		AO353_11930	0.67	-0.1
2,631,677	+		AO353_11930	0.67	-0.5
2,631,677	+		AO353_11930	0.67	-1.0
2,631,739	+		AO353_11930	0.83	+0.4
2,631,804	-				-0.1
2,631,812	-				+1.5
2,631,830	+				+0.9
2,631,831	-				-0.1
2,631,831	-				-1.1
2,631,831	-				+0.5
2,631,831	-				-0.8
2,631,831	-				-1.7
2,631,919	+				-1.8
2,631,922	+				-2.0
2,631,984	+				-2.2
2,631,984	+				-3.0
2,631,984	+				+1.3
2,632,016	+				-0.8
2,632,017	-				-1.4
2,632,017	-				-0.8
2,632,026	+				-0.7
2,632,026	+				+1.1
2,632,026	+				+0.1
2,632,027	-				-1.8
2,632,030	-				-2.0
2,632,038	+				-1.3
2,632,038	+				-0.5
2,632,038	+				+2.5
2,632,038	+				-0.7
2,632,038	+				-1.7
2,632,038	+				+0.9
2,632,039	-				-0.1
2,632,039	-				+0.1
2,632,039	-				-0.5
2,632,039	-				+0.9
2,632,039	-				+0.5
2,632,050	+				+0.9
2,632,084	-				-1.8
2,632,171	+		AO353_11935	0.10	-0.7
2,632,171	+		AO353_11935	0.10	+0.5
2,632,171	+		AO353_11935	0.10	-1.1
2,632,172	-		AO353_11935	0.10	+0.2
2,632,172	-		AO353_11935	0.10	-0.5
2,632,172	-		AO353_11935	0.10	-0.8
2,632,186	+		AO353_11935	0.11	+0.0
2,632,186	+		AO353_11935	0.11	-2.7
2,632,186	+		AO353_11935	0.11	+1.9
2,632,187	-		AO353_11935	0.11	-1.0
2,632,187	-		AO353_11935	0.11	+0.5
2,632,187	-		AO353_11935	0.11	-0.2
2,632,187	-		AO353_11935	0.11	-0.7
2,632,297	+		AO353_11935	0.20	-0.8
2,632,298	-		AO353_11935	0.20	+1.4
2,632,329	+		AO353_11935	0.22	+0.5
2,632,329	+		AO353_11935	0.22	-0.5
2,632,330	-		AO353_11935	0.22	+1.1