Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11770

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
2,597,423	-				+2.5
2,597,435	+				-2.1
2,597,436	-				+0.6
2,597,436	-				+0.8
2,597,442	+				-0.5
2,597,442	+				-1.5
2,597,443	-				-0.4
2,597,456	+				-0.3
2,597,456	+				-0.7
2,597,456	+				+0.4
2,597,456	+				-0.8
2,597,456	+				-0.8
2,597,456	+				-0.7
2,597,456	+				+0.2
2,597,456	+				-0.4
2,597,456	+				-0.5
2,597,456	+				-0.2
2,597,456	+				-2.1
2,597,456	+				-2.4
2,597,457	-				-1.0
2,597,457	-				-0.3
2,597,457	-				-1.8
2,597,457	-				+1.0
2,597,457	-				+0.9
2,597,457	-				+0.4
2,597,457	-				+0.3
2,597,457	-				+0.2
2,597,457	-				-0.1
2,597,457	-				-0.8
2,597,457	-				+0.4
2,597,457	-				+0.9
2,597,460	+				-0.6
2,597,460	+				+0.8
2,597,460	+				-1.7
2,597,460	+				+0.5
2,597,460	+				-0.7
2,597,461	-				+0.9
2,597,461	-				-0.5
2,597,461	-				-0.3
2,597,511	+				+2.0
2,597,511	+				+0.5
2,597,511	+				-1.3
2,597,511	+				+1.4
2,597,511	+				+0.3
2,597,511	+				-0.8
2,597,511	+				-0.1
2,597,511	+				-1.3
2,597,511	+				-0.8
2,597,511	+				-0.3
2,597,511	+				-1.5
2,597,511	+				-1.5
2,597,511	+				-0.5
2,597,511	+				+1.2
2,597,511	+				-1.2
2,597,511	+				-0.5
2,597,511	+				-2.4
2,597,511	+				-1.7
2,597,511	+				-0.3
2,597,511	+				-1.1
2,597,511	+				-2.0
2,597,512	-				+0.2
2,597,512	-				+0.9
2,597,512	-				-1.1
2,597,512	-				-0.2
2,597,512	-				-1.3
2,597,512	-				+1.4
2,597,512	-				+0.6
2,597,512	-				-1.0
2,597,512	-				-0.8
2,597,512	-				+0.1
2,597,512	-				-0.2
2,597,512	-				-0.7
2,597,512	-				-1.1
2,597,512	-				+0.0
2,597,512	-				-0.2
2,597,512	-				+1.5
2,597,512	-				+0.1
2,597,512	-				-0.8
2,597,512	-				-0.2
2,597,550	+				+0.2
2,597,550	+				-0.8
2,597,550	+				+0.5
2,597,551	-				-0.8
2,597,551	-				+1.0
2,597,553	+				-2.1
2,597,553	+				+0.5
2,597,553	+				-0.5
2,597,553	+				+0.3
2,597,554	-				-0.8
2,597,554	-				-0.1
2,597,554	-				-1.7
2,597,554	-				+0.2
2,597,554	-				+1.5
2,597,554	-				+0.3
2,597,554	-				+0.9
2,597,554	-				+1.2
2,597,566	+				+0.5
2,597,629	+		AO353_11765	0.10	+1.8
2,597,630	-		AO353_11765	0.10	+1.5
2,597,654	+		AO353_11765	0.16	+0.2
2,597,654	+		AO353_11765	0.16	+0.5
2,597,654	+		AO353_11765	0.16	-1.5
2,597,655	-		AO353_11765	0.16	+0.1
2,597,655	-		AO353_11765	0.16	-0.5
2,597,655	-		AO353_11765	0.16	-0.8
2,597,655	-		AO353_11765	0.16	+0.1
2,597,655	-		AO353_11765	0.16	-1.1
2,597,846	+		AO353_11765	0.63	-0.4
2,597,846	+		AO353_11765	0.63	+0.5
2,597,846	+		AO353_11765	0.63	+0.3
2,597,846	+		AO353_11765	0.63	+1.0
2,597,846	+		AO353_11765	0.63	+1.5
2,597,846	+		AO353_11765	0.63	-0.5
2,597,846	+		AO353_11765	0.63	+0.3
2,597,846	+		AO353_11765	0.63	+1.5
2,597,846	+		AO353_11765	0.63	+0.3
2,597,846	+		AO353_11765	0.63	+1.5
2,597,846	+		AO353_11765	0.63	-0.5
2,597,846	+		AO353_11765	0.63	+1.0
2,597,846	+		AO353_11765	0.63	-1.2
2,597,846	+		AO353_11765	0.63	-0.2
2,597,846	+		AO353_11765	0.63	-1.3
2,597,847	-		AO353_11765	0.63	+1.3
2,597,847	-		AO353_11765	0.63	+0.2
2,597,847	-		AO353_11765	0.63	-1.1
2,597,847	-		AO353_11765	0.63	+1.3
2,597,847	-		AO353_11765	0.63	+0.3
2,597,847	-		AO353_11765	0.63	+1.7
2,597,847	-		AO353_11765	0.63	-0.7
2,597,994	-				+1.2
2,598,079	+				+0.5
2,598,079	+				-0.5
2,598,079	+				+1.8
2,598,079	+				-2.3
2,598,080	-				-1.2
2,598,080	-				-0.8
2,598,080	-				-0.2
2,598,080	-				-0.5
2,598,164	-				-0.8
2,598,164	-				-0.6
2,598,168	+				-0.7
2,598,169	-				-0.3
2,598,181	+				+0.5
2,598,181	+				+1.0
2,598,182	-				+1.1
2,598,182	-				+1.5
2,598,225	+				+1.2
2,598,225	+				-0.7
2,598,225	+				-0.5
2,598,226	-				+1.5
2,598,246	+				-1.5
2,598,249	+				-0.6
2,598,249	+				-0.5
2,598,250	-				+0.5
2,598,250	-				-1.2
2,598,250	-				+1.0
2,598,250	-				-2.5
2,598,300	+				-1.9
2,598,300	+				-1.5
2,598,300	+				+0.3
2,598,300	+				+1.5
2,598,326	+				+2.1
2,598,326	+				-0.1
2,598,326	+				+1.5
2,598,326	+				-0.1
2,598,326	+				-1.8
2,598,326	+				-0.1
2,598,326	+				-2.7
2,598,326	+				-0.8
2,598,326	+				+1.1
2,598,326	+				-0.1
2,598,326	+				-0.1
2,598,326	+				+1.3
2,598,326	+				+0.5
2,598,327	-				-1.5
2,598,327	-				+2.1
2,598,327	-				-1.5
2,598,413	+				-0.8
2,598,413	+				+2.1
2,598,413	+				+1.2
2,598,414	-				-1.3
2,598,414	-				-1.8
2,598,414	-				-1.8
2,598,414	-				-1.3
2,598,417	+				+0.2
2,598,765	+		AO353_11770	0.49	-1.5
2,598,766	-		AO353_11770	0.49	+0.1
2,599,247	-				-0.3
2,599,295	+				-1.5
2,599,299	-				-1.1
2,599,319	+				-0.2
2,599,346	+				-0.1
2,599,346	+				+0.4
2,599,347	-				+0.9
2,599,362	-				+2.2
2,599,365	-				-1.1
2,599,423	+				-0.1
2,599,423	+				-1.0
2,599,424	-				+2.5
2,599,433	+				-1.1
2,599,433	+				-0.8
2,599,433	+				+1.0
2,599,433	+				+2.5
2,599,434	-				-0.2
2,599,434	-				+0.8
2,599,434	-				+2.0
2,599,434	-				+2.1
2,599,434	-				+1.5
2,599,434	-				+1.2
2,599,434	-				+2.5
2,599,434	-				+2.3
2,599,704	+		AO353_11775	0.19	+2.1
2,599,704	+		AO353_11775	0.19	+1.4
2,599,704	+		AO353_11775	0.19	+1.8
2,599,704	+		AO353_11775	0.19	+1.3
2,599,704	+		AO353_11775	0.19	+1.5
2,599,704	+		AO353_11775	0.19	+0.9
2,599,704	+		AO353_11775	0.19	-1.1
2,599,705	-		AO353_11775	0.19	+0.4
2,599,705	-		AO353_11775	0.19	+0.3
2,599,705	-		AO353_11775	0.19	+0.3
2,599,705	-		AO353_11775	0.19	+2.2
2,599,705	-		AO353_11775	0.19	+1.5
2,599,705	-		AO353_11775	0.19	-0.5
2,599,724	+		AO353_11775	0.20	-0.3
2,599,724	+		AO353_11775	0.20	+0.8
2,599,725	-		AO353_11775	0.20	+0.7
2,599,725	-		AO353_11775	0.20	+1.9
2,599,725	-		AO353_11775	0.20	+0.3
2,599,725	-		AO353_11775	0.20	-1.3
2,599,802	+		AO353_11775	0.25	+2.7
2,599,802	+		AO353_11775	0.25	+0.8
2,599,802	+		AO353_11775	0.25	-0.3
2,599,802	+		AO353_11775	0.25	+1.6
2,599,802	+		AO353_11775	0.25	+1.2
2,599,802	+		AO353_11775	0.25	-1.0
2,599,802	+		AO353_11775	0.25	+0.9
2,599,803	-		AO353_11775	0.26	+0.1
2,599,803	-		AO353_11775	0.26	+0.5
2,600,180	+		AO353_11775	0.50	+1.7
2,600,181	-		AO353_11775	0.50	-1.3
2,600,181	-		AO353_11775	0.50	-1.1
2,600,181	-		AO353_11775	0.50	+0.6