Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05945

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
1,319,739	+				-1.1
1,319,740	-				+0.3
1,319,847	+				-1.1
1,319,847	+				-1.9
1,319,847	+				+0.1
1,319,847	+				-2.1
1,319,847	+				-1.3
1,319,847	+				-0.1
1,319,848	-				+3.8
1,319,848	-				-0.9
1,319,848	-				-0.1
1,319,848	-				-0.9
1,319,848	-				+0.1
1,319,900	+				-1.3
1,319,945	+				-0.9
1,319,945	+				+0.4
1,319,945	+				-0.5
1,319,945	+				-1.3
1,319,945	+				-2.3
1,319,946	-				+0.4
1,319,946	-				+0.2
1,319,947	+				-0.3
1,319,948	-				-0.5
1,319,951	-				-0.2
1,319,966	-				+1.6
1,319,998	-				+0.2
1,320,043	+				+1.4
1,320,043	+				+0.5
1,320,043	+				-0.3
1,320,043	+				-0.0
1,320,043	+				-2.1
1,320,043	+				+0.2
1,320,043	+				+1.3
1,320,043	+				-0.3
1,320,043	+				+1.2
1,320,043	+				-0.7
1,320,044	-				-0.3
1,320,044	-				-0.3
1,320,044	-				-0.2
1,320,044	-				-2.9
1,320,044	-				-0.5
1,320,044	-				-1.1
1,320,044	-				-0.3
1,320,044	-				-0.8
1,320,063	+		AO353_05940	0.12	+0.9
1,320,064	-		AO353_05940	0.12	+1.0
1,320,258	+		AO353_05940	0.53	+1.1
1,320,259	-		AO353_05940	0.53	+0.8
1,320,298	+		AO353_05940	0.61	+1.8
1,320,298	+		AO353_05940	0.61	+1.1
1,320,298	+		AO353_05940	0.61	+0.9
1,320,298	+		AO353_05940	0.61	+1.0
1,320,299	-		AO353_05940	0.62	+0.5
1,320,299	-		AO353_05940	0.62	+1.2
1,320,322	+		AO353_05940	0.66	-0.9
1,320,322	+		AO353_05940	0.66	+1.7
1,320,322	+		AO353_05940	0.66	-0.2
1,320,322	+		AO353_05940	0.66	-0.6
1,320,322	+		AO353_05940	0.66	+1.5
1,320,322	+		AO353_05940	0.66	-1.1
1,320,322	+		AO353_05940	0.66	-0.3
1,320,322	+		AO353_05940	0.66	+2.6
1,320,322	+		AO353_05940	0.66	-0.9
1,320,322	+		AO353_05940	0.66	-0.9
1,320,322	+		AO353_05940	0.66	-1.9
1,320,322	+		AO353_05940	0.66	+0.8
1,320,322	+		AO353_05940	0.66	-0.5
1,320,323	-		AO353_05940	0.67	+0.2
1,320,323	-		AO353_05940	0.67	-0.6
1,320,323	-		AO353_05940	0.67	-1.1
1,320,323	-		AO353_05940	0.67	+0.2
1,320,323	-		AO353_05940	0.67	+0.0
1,320,323	-		AO353_05940	0.67	-0.3
1,320,323	-		AO353_05940	0.67	+1.2
1,320,323	-		AO353_05940	0.67	+0.2
1,320,323	-		AO353_05940	0.67	-0.9
1,320,323	-		AO353_05940	0.67	+0.9
1,320,323	-		AO353_05940	0.67	+1.4
1,320,323	-		AO353_05940	0.67	-0.6
1,320,323	-		AO353_05940	0.67	-2.1
1,320,455	+				-0.6
1,320,455	+				-0.1
1,320,455	+				+0.4
1,320,455	+				+1.2
1,320,456	-				+2.2
1,320,456	-				+0.9
1,320,478	+				-0.9
1,320,478	+				-1.3
1,320,478	+				-0.8
1,320,478	+				+1.0
1,320,478	+				-0.2
1,320,479	-				+0.7
1,320,479	-				+0.2
1,320,479	-				-0.4
1,320,479	-				+1.8
1,320,479	-				+0.7
1,320,486	-				-0.3
1,320,576	-				-1.0
1,320,634	-		AO353_05945	0.13	+0.1
1,320,698	+		AO353_05945	0.19	+0.9
1,320,698	+		AO353_05945	0.19	-2.3
1,320,698	+		AO353_05945	0.19	-0.6
1,320,698	+		AO353_05945	0.19	+1.6
1,320,699	-		AO353_05945	0.19	-0.8
1,320,722	+		AO353_05945	0.22	+0.3
1,320,722	+		AO353_05945	0.22	+0.9
1,320,722	+		AO353_05945	0.22	-1.3
1,320,722	+		AO353_05945	0.22	+0.2
1,320,722	+		AO353_05945	0.22	+1.3
1,320,722	+		AO353_05945	0.22	+0.6
1,320,723	-		AO353_05945	0.22	+0.2
1,320,723	-		AO353_05945	0.22	+0.9
1,320,818	+		AO353_05945	0.31	+1.9
1,320,818	+		AO353_05945	0.31	+0.5
1,320,819	-		AO353_05945	0.31	-1.3
1,320,819	-		AO353_05945	0.31	+0.7
1,320,819	-		AO353_05945	0.31	+0.8
1,320,819	-		AO353_05945	0.31	-0.8
1,320,819	-		AO353_05945	0.31	+2.0
1,320,819	-		AO353_05945	0.31	-0.3
1,320,819	-		AO353_05945	0.31	-1.2
1,320,839	+		AO353_05945	0.33	+1.2
1,320,839	+		AO353_05945	0.33	-2.2
1,320,840	-		AO353_05945	0.33	+1.0
1,320,840	-		AO353_05945	0.33	+0.9
1,320,840	-		AO353_05945	0.33	+0.2
1,320,840	-		AO353_05945	0.33	+1.7
1,320,884	+		AO353_05945	0.38	-2.0
1,320,884	+		AO353_05945	0.38	+1.0
1,320,884	+		AO353_05945	0.38	-2.6
1,320,884	+		AO353_05945	0.38	+0.5
1,320,885	-		AO353_05945	0.38	+0.1
1,320,885	-		AO353_05945	0.38	-0.8
1,320,996	-		AO353_05945	0.49	-0.3
1,321,274	+		AO353_05945	0.76	+2.9
1,321,274	+		AO353_05945	0.76	-2.2
1,321,274	+		AO353_05945	0.76	+0.2
1,321,274	+		AO353_05945	0.76	+0.2
1,321,274	+		AO353_05945	0.76	-0.3
1,321,275	-				-0.3
1,321,275	-		AO353_05945	0.76	+0.2
1,321,325	+		AO353_05945	0.81	+0.0
1,321,326	-		AO353_05945	0.81	-0.3
1,321,389	+		AO353_05945	0.87	+0.5
1,321,389	+		AO353_05945	0.87	+0.2
1,321,466	+				-0.3
1,321,466	+				-1.3
1,321,467	-				-0.8
1,321,467	-				-0.9
1,321,467	-				+0.2
1,321,467	-				-0.1
1,321,467	-				+1.0
1,321,476	+				-0.6
1,321,509	+				-0.5
1,321,510	-				-2.2
1,321,635	+				-1.2
1,321,635	+				-0.3
1,321,635	+				-1.1
1,321,635	+				-1.1
1,321,635	+				+1.2
1,321,635	+				-0.8
1,321,636	-				+1.7
1,321,636	-				-1.6
1,321,636	-				+0.6
1,321,705	+				+1.2
1,321,705	+				+0.2
1,321,705	+				-0.8
1,321,706	-				-0.7
1,321,706	-				-0.5
1,321,706	-				-0.3
1,321,760	+				-0.6
1,321,760	+				-0.6
1,321,761	-				+1.7
1,321,761	-				-1.6
1,321,763	+				+2.7
1,321,763	+				+0.9
1,321,764	-				-1.8
1,321,764	-				+0.1
1,321,764	-				-0.8
1,321,764	-				+0.3
1,321,764	-				-0.2
1,321,764	-				-1.6
1,321,764	-				-0.4
1,321,764	-				+0.7
1,321,764	-				-0.9
1,321,764	-				+1.6
1,321,779	+				+1.0
1,321,779	+				+0.4
1,321,779	+				+2.2
1,321,779	+				-1.5
1,321,780	-				-0.8
1,321,780	-				-0.9
1,321,780	-				+0.2
1,321,860	+				-0.0
1,321,880	+				-0.8
1,321,881	-				-1.9
1,321,881	-				+0.2
1,321,908	-				-0.5
1,322,036	-				+0.8
1,322,061	-				+0.2
1,322,061	-				+1.1
1,322,154	+				-0.3
1,322,155	-				-1.8
1,322,173	+				-1.3
1,322,237	+		AO353_05950	0.11	-0.1
1,322,237	+		AO353_05950	0.11	-0.5
1,322,237	+		AO353_05950	0.11	-0.9
1,322,237	+				-1.1
1,322,237	+		AO353_05950	0.11	+3.2
1,322,237	+		AO353_05950	0.11	+0.2
1,322,237	+		AO353_05950	0.11	-0.6
1,322,238	-		AO353_05950	0.12	-0.6
1,322,238	-		AO353_05950	0.12	+1.1
1,322,238	-		AO353_05950	0.12	+0.2
1,322,238	-		AO353_05950	0.12	-1.3
1,322,238	-		AO353_05950	0.12	-1.3
1,322,238	-		AO353_05950	0.12	+1.0
1,322,238	-		AO353_05950	0.12	+0.4
1,322,238	-		AO353_05950	0.12	-0.3
1,322,238	-		AO353_05950	0.12	+0.9
1,322,238	-		AO353_05950	0.12	-0.3
1,322,413	+		AO353_05950	0.24	-0.2
1,322,414	-		AO353_05950	0.24	+0.9
1,322,414	-		AO353_05950	0.24	-0.7
1,322,414	-		AO353_05950	0.24	-0.3
1,322,438	+		AO353_05950	0.26	+0.4
1,322,439	-		AO353_05950	0.26	-1.1
1,322,439	-		AO353_05950	0.26	+0.5