Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_00670

Experiment: Doxycycline hyclate 0.0002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0002 mg/ml
140,749	+		AO353_00660	0.80	-0.2
140,749	+				+1.8
140,749	+		AO353_00660	0.80	-1.5
140,749	+		AO353_00660	0.80	-0.2
140,749	+		AO353_00660	0.80	+0.1
140,749	+		AO353_00660	0.80	-0.2
140,749	+		AO353_00660	0.80	-1.2
140,750	-		AO353_00660	0.81	-0.5
140,750	-		AO353_00660	0.81	+0.8
140,750	-		AO353_00660	0.81	-0.2
140,750	-		AO353_00660	0.81	+0.2
140,932	+				+0.8
140,932	+				-0.5
140,933	-				+1.0
140,933	-				-0.6
140,933	-				+1.7
140,934	+				-1.2
140,934	+				-1.2
140,934	+				+0.1
140,934	+				+0.5
140,934	+				+1.2
140,935	-				-1.2
140,935	-				-1.5
140,935	-				-0.5
140,935	-				-0.2
140,935	-				+1.3
140,935	-				+1.6
140,935	-				-1.8
140,949	-				-0.5
141,115	+		AO353_00665	0.26	+0.8
141,115	+		AO353_00665	0.26	-0.2
141,245	+		AO353_00665	0.50	-2.2
141,245	+		AO353_00665	0.50	-0.1
141,245	+		AO353_00665	0.50	-0.8
141,246	-		AO353_00665	0.50	+1.9
141,246	-		AO353_00665	0.50	+0.7
141,246	-		AO353_00665	0.50	+1.1
141,427	-		AO353_00665	0.83	-0.5
141,427	-		AO353_00665	0.83	-1.5
141,517	+				+1.0
141,517	+				-0.8
141,518	-				+0.4
141,518	-				-2.5
141,518	-				-0.8
141,518	-				+0.5
141,518	-				+0.8
141,518	-				+0.8
141,583	+				-0.7
141,752	+				-0.9
141,753	-				-2.2
141,753	-				+0.7
141,753	-				+0.1
142,069	-		AO353_00670	0.37	+0.8
142,278	+		AO353_00670	0.56	-1.2
142,278	+		AO353_00670	0.56	-1.6
142,279	-		AO353_00670	0.56	-1.6
142,281	-		AO353_00670	0.56	-1.2
142,337	+		AO353_00670	0.61	+0.7
142,337	+		AO353_00670	0.61	+0.8
142,337	+		AO353_00670	0.61	+1.4
142,338	-		AO353_00670	0.61	-0.4
142,338	-		AO353_00670	0.61	-0.2
142,338	-		AO353_00670	0.61	-1.2
142,655	+		AO353_00670	0.88	-1.6
142,656	-		AO353_00670	0.88	-0.5
142,656	-		AO353_00670	0.88	-2.2
142,769	+				+1.0
142,770	-				-0.9
142,770	-				-1.4
142,770	-				+0.0
142,770	-				+2.0
142,770	-				+0.0
142,819	+				-1.8
142,819	+				+1.4
142,922	+				+0.8
142,922	+				-0.4
142,922	+				-1.8
142,922	+				+0.6
142,923	-				+0.2
142,932	+				-1.5
142,932	+				-0.8
142,932	+				-0.8
142,995	+				-0.2
142,995	+				-0.2
142,995	+				-1.1
142,995	+				+1.3
143,110	+		AO353_00675	0.19	-0.8
143,111	-		AO353_00675	0.19	+0.6
143,133	+		AO353_00675	0.23	-1.2
143,133	+		AO353_00675	0.23	+0.8
143,133	+		AO353_00675	0.23	-1.5
143,133	+		AO353_00675	0.23	+1.2
143,134	-		AO353_00675	0.23	+0.2
143,134	-		AO353_00675	0.23	-1.5
143,134	-		AO353_00675	0.23	+0.1
143,134	-		AO353_00675	0.23	+0.5
143,134	-		AO353_00675	0.23	-0.5
143,195	-		AO353_00675	0.33	+2.0
143,195	-		AO353_00675	0.33	+0.8
143,289	+		AO353_00675	0.49	-0.8
143,290	-		AO353_00675	0.49	-1.0
143,323	-		AO353_00675	0.55	-0.8
143,323	-		AO353_00675	0.55	+0.8
143,354	+		AO353_00675	0.60	-1.3
143,354	+		AO353_00675	0.60	+0.6
143,354	+		AO353_00675	0.60	+0.4
143,354	+		AO353_00675	0.60	+0.6
143,354	+		AO353_00675	0.60	-0.8
143,355	-		AO353_00675	0.60	-1.0
143,355	-		AO353_00675	0.60	-0.6
143,355	-		AO353_00675	0.60	+0.4
143,355	-		AO353_00675	0.60	-0.6
143,515	+		AO353_00675	0.86	-0.2
143,516	-		AO353_00675	0.87	-0.5
143,614	+				-0.1
143,614	+				-0.6
143,614	+				-2.6
143,614	+				-2.2
143,615	-				+0.3
143,615	-				-0.2
143,615	-				-1.2
143,632	+				+0.2
143,633	-				-0.8
143,633	-				+0.6
143,634	+				-0.8
143,634	+				-0.2
143,748	+				+1.4
143,748	+				-0.8
143,749	-				+0.7
143,780	-				+0.3