Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1525

Experiment: Doxycycline hyclate 0.0015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0015625 mg/ml
1,582,922	-				-2.6
1,582,986	+				-1.9
1,583,053	-				+1.4
1,583,090	-				+0.7
1,583,119	-				-0.7
1,583,199	+				+0.6
1,583,200	+				-0.8
1,583,211	+				+1.1
1,583,211	+				+0.6
1,583,211	+				-0.1
1,583,212	+				-1.7
1,583,218	+				-1.4
1,583,219	-				+0.3
1,583,219	-				+1.6
1,583,219	-				-0.1
1,583,219	-				+0.3
1,583,219	-				-0.7
1,583,220	-				+0.5
1,583,226	-				+0.9
1,583,228	+				-0.7
1,583,279	+				+0.5
1,583,279	+				+0.4
1,583,279	+				-1.1
1,583,279	+				-0.1
1,583,279	+				+0.2
1,583,279	+				-0.1
1,583,279	+				+0.4
1,583,279	+				+0.6
1,583,279	+				+1.3
1,583,279	+				-1.1
1,583,279	+				+0.6
1,583,279	+				+0.6
1,583,279	+				-1.2
1,583,287	-				-0.9
1,583,287	-				+0.9
1,583,287	-				-2.1
1,583,287	-				+0.9
1,583,287	-				+0.7
1,583,287	-				+3.2
1,583,287	-				+1.4
1,583,287	-				-0.1
1,583,287	-				-0.7
1,583,287	-				-2.9
1,583,287	-				+0.8
1,583,287	-				+1.4
1,583,287	-				+1.4
1,583,287	-				+3.9
1,583,291	+				+0.1
1,583,299	-				-1.4
1,583,370	-				-3.5
1,583,370	-				-1.7
1,583,385	-				-1.3
1,583,385	-				-2.1
1,583,402	+				-2.1
1,583,410	-				+0.9
1,583,410	-				+0.7
1,583,410	-				-0.5
1,583,410	-				-1.1
1,583,410	-				-0.4
1,583,410	-				-2.1
1,583,410	-				-0.2
1,583,410	-				-0.1
1,583,410	-				-4.5
1,583,545	+				-1.1
1,583,575	-				-0.9
1,583,613	+	typA	Synpcc7942_1525	0.11	-2.7
1,583,621	-	typA	Synpcc7942_1525	0.12	-1.5
1,583,688	-	typA	Synpcc7942_1525	0.16	-0.3
1,583,810	-	typA	Synpcc7942_1525	0.22	-2.5
1,583,892	+	typA	Synpcc7942_1525	0.27	-1.1
1,583,959	+	typA	Synpcc7942_1525	0.31	-2.1
1,584,009	+	typA	Synpcc7942_1525	0.34	-0.7
1,584,076	+	typA	Synpcc7942_1525	0.37	-2.7
1,584,099	+	typA	Synpcc7942_1525	0.39	-3.1
1,584,099	+	typA	Synpcc7942_1525	0.39	+2.4
1,584,126	-	typA	Synpcc7942_1525	0.40	-0.9
1,584,133	+	typA	Synpcc7942_1525	0.40	-0.1
1,584,150	+	typA	Synpcc7942_1525	0.41	-0.1
1,584,229	+	typA	Synpcc7942_1525	0.46	-1.7
1,584,265	+	typA	Synpcc7942_1525	0.48	-1.6
1,584,273	-	typA	Synpcc7942_1525	0.48	-2.7
1,584,316	-	typA	Synpcc7942_1525	0.51	-2.1
1,584,489	+	typA	Synpcc7942_1525	0.60	-1.1
1,584,489	+	typA	Synpcc7942_1525	0.60	-0.7
1,584,497	-	typA	Synpcc7942_1525	0.61	-0.1
1,584,499	-	typA	Synpcc7942_1525	0.61	-2.5
1,584,501	-	typA	Synpcc7942_1525	0.61	-1.7
1,584,543	-	typA	Synpcc7942_1525	0.63	-1.1
1,584,543	-	typA	Synpcc7942_1525	0.63	-1.1
1,584,543	-	typA	Synpcc7942_1525	0.63	+0.6
1,584,621	-	typA	Synpcc7942_1525	0.68	-2.9
1,584,705	-	typA	Synpcc7942_1525	0.72	-2.7
1,584,880	-	typA	Synpcc7942_1525	0.82	-1.7
1,584,902	+	typA	Synpcc7942_1525	0.83	-1.4
1,584,955	+	typA	Synpcc7942_1525	0.86	-1.1
1,585,061	+				+1.2
1,585,071	-				-1.5
1,585,101	-				-0.5
1,585,102	-				-2.9
1,585,118	-				-0.1
1,585,134	+				-3.1
1,585,188	+				+0.7
1,585,194	+				-0.9
1,585,194	+				-1.2
1,585,194	+				+1.9
1,585,195	+				-1.9
1,585,216	+				+0.9
1,585,216	+				+1.4
1,585,332	-				+0.1
1,585,368	+		Synpcc7942_1526	0.10	+0.9
1,585,387	-		Synpcc7942_1526	0.13	+1.4
1,585,392	+		Synpcc7942_1526	0.13	+0.2
1,585,404	+		Synpcc7942_1526	0.15	+0.9
1,585,427	+		Synpcc7942_1526	0.18	+1.3
1,585,515	+		Synpcc7942_1526	0.29	+0.0
1,585,536	+		Synpcc7942_1526	0.31	+0.9
1,585,536	+		Synpcc7942_1526	0.31	-2.0
1,585,537	-		Synpcc7942_1526	0.32	-0.7
1,585,557	-		Synpcc7942_1526	0.34	-0.6
1,585,564	+		Synpcc7942_1526	0.35	+0.6
1,585,564	+		Synpcc7942_1526	0.35	-1.1
1,585,564	+		Synpcc7942_1526	0.35	-0.3
1,585,572	-		Synpcc7942_1526	0.36	+0.8
1,585,586	+		Synpcc7942_1526	0.38	+0.4
1,585,589	+		Synpcc7942_1526	0.38	-0.1
1,585,596	-		Synpcc7942_1526	0.39	-1.7
1,585,598	+		Synpcc7942_1526	0.39	-1.6
1,585,607	+		Synpcc7942_1526	0.40	-0.1
1,585,671	-		Synpcc7942_1526	0.48	+0.7
1,585,671	-		Synpcc7942_1526	0.48	+0.4
1,585,682	+				-1.7
1,585,686	+		Synpcc7942_1526	0.50	-0.1
1,585,690	-		Synpcc7942_1526	0.51	-1.4
1,585,691	+		Synpcc7942_1526	0.51	+0.6
1,585,697	+		Synpcc7942_1526	0.52	-1.6
1,585,699	-		Synpcc7942_1526	0.52	+0.5
1,585,719	+		Synpcc7942_1526	0.55	-1.0
1,585,757	-		Synpcc7942_1526	0.59	-1.1
1,585,810	+		Synpcc7942_1526	0.66	+0.3
1,585,818	-		Synpcc7942_1526	0.67	-0.6
1,585,835	-		Synpcc7942_1526	0.69	-1.7
1,585,862	-		Synpcc7942_1526	0.73	+1.4
1,585,889	-		Synpcc7942_1526	0.76	+2.7
1,585,949	+		Synpcc7942_1526	0.84	+0.9
1,585,975	-		Synpcc7942_1526	0.87	+1.3
1,585,977	+		Synpcc7942_1526	0.87	-2.6
1,586,004	+				+1.9
1,586,004	+				+1.2
1,586,005	+				+1.2
1,586,013	-				+1.0
1,586,045	-				+0.7
1,586,072	+				-0.1
1,586,072	+				+2.0
1,586,080	-				+1.0
1,586,080	-				+1.6
1,586,080	-				-0.1
1,586,080	-				+1.9
1,586,080	-				-1.8
1,586,080	-				+0.7
1,586,080	-				+0.4
1,586,080	-				-2.5
1,586,080	-				+0.3
1,586,080	-				-0.4
1,586,096	+				+0.0
1,586,096	+				-0.1
1,586,096	+				+0.5
1,586,096	+				-3.8
1,586,096	+				+0.4
1,586,096	+				-0.1
1,586,104	-				-0.9
1,586,104	-				+0.5
1,586,104	-				+3.2
1,586,111	-				+0.9
1,586,118	-				-0.7
1,586,122	+				+0.6
1,586,128	-				+1.4
1,586,153	+				+0.2
1,586,166	+				-1.7
1,586,193	-				+1.7