Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1256

Experiment: Doxycycline hyclate 0.0015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0015625 mg/ml
1,278,095	+		Synpcc7942_1255	0.21	+0.8
1,278,100	+		Synpcc7942_1255	0.21	-1.0
1,278,170	+		Synpcc7942_1255	0.27	+0.7
1,278,170	+		Synpcc7942_1255	0.27	+0.9
1,278,178	-		Synpcc7942_1255	0.28	+0.7
1,278,188	-		Synpcc7942_1255	0.29	-3.6
1,278,248	+		Synpcc7942_1255	0.34	-0.7
1,278,248	+		Synpcc7942_1255	0.34	-0.7
1,278,248	+		Synpcc7942_1255	0.34	+0.5
1,278,248	+		Synpcc7942_1255	0.34	+0.6
1,278,248	+		Synpcc7942_1255	0.34	+0.1
1,278,248	+		Synpcc7942_1255	0.34	+1.1
1,278,256	-		Synpcc7942_1255	0.35	+0.3
1,278,256	-		Synpcc7942_1255	0.35	+0.4
1,278,256	-		Synpcc7942_1255	0.35	+1.6
1,278,268	+		Synpcc7942_1255	0.36	-0.8
1,278,292	+		Synpcc7942_1255	0.38	+1.4
1,278,303	-		Synpcc7942_1255	0.39	-1.0
1,278,319	-		Synpcc7942_1255	0.40	-1.1
1,278,320	+		Synpcc7942_1255	0.40	+1.0
1,278,320	+		Synpcc7942_1255	0.40	-2.8
1,278,323	+		Synpcc7942_1255	0.40	-0.0
1,278,323	+		Synpcc7942_1255	0.40	+0.4
1,278,328	-		Synpcc7942_1255	0.41	+1.0
1,278,331	-		Synpcc7942_1255	0.41	-0.7
1,278,336	-		Synpcc7942_1255	0.42	-1.1
1,278,340	-		Synpcc7942_1255	0.42	-1.5
1,278,347	-		Synpcc7942_1255	0.43	+0.1
1,278,347	-				-0.1
1,278,408	+		Synpcc7942_1255	0.48	+1.0
1,278,426	-		Synpcc7942_1255	0.49	+1.9
1,278,430	+		Synpcc7942_1255	0.50	-0.5
1,278,435	-		Synpcc7942_1255	0.50	-0.1
1,278,440	+		Synpcc7942_1255	0.51	+0.7
1,278,449	-		Synpcc7942_1255	0.51	+0.6
1,278,491	+		Synpcc7942_1255	0.55	+1.1
1,278,491	+		Synpcc7942_1255	0.55	-0.1
1,278,491	+		Synpcc7942_1255	0.55	+1.3
1,278,491	+		Synpcc7942_1255	0.55	-1.0
1,278,499	-		Synpcc7942_1255	0.56	-0.9
1,278,499	-		Synpcc7942_1255	0.56	+0.4
1,278,499	-		Synpcc7942_1255	0.56	-1.7
1,278,499	-		Synpcc7942_1255	0.56	-0.4
1,278,499	-		Synpcc7942_1255	0.56	-0.1
1,278,499	-		Synpcc7942_1255	0.56	+0.9
1,278,519	+		Synpcc7942_1255	0.57	-1.1
1,278,541	+		Synpcc7942_1255	0.59	+1.5
1,278,581	+		Synpcc7942_1255	0.63	-0.3
1,278,620	+		Synpcc7942_1255	0.66	-0.3
1,278,620	+		Synpcc7942_1255	0.66	-0.9
1,278,625	+		Synpcc7942_1255	0.66	+1.0
1,278,638	+		Synpcc7942_1255	0.68	-0.9
1,278,645	+		Synpcc7942_1255	0.68	+0.2
1,278,652	+		Synpcc7942_1255	0.69	-0.4
1,278,653	-		Synpcc7942_1255	0.69	-0.1
1,278,723	+		Synpcc7942_1255	0.75	-0.5
1,278,731	-		Synpcc7942_1255	0.76	-1.1
1,278,733	+		Synpcc7942_1255	0.76	-0.9
1,278,771	+		Synpcc7942_1255	0.79	-1.0
1,278,777	+		Synpcc7942_1255	0.79	-1.1
1,278,783	+		Synpcc7942_1255	0.80	-0.6
1,278,786	-		Synpcc7942_1255	0.80	-0.1
1,278,789	+		Synpcc7942_1255	0.80	-0.1
1,278,795	-		Synpcc7942_1255	0.81	-0.0
1,278,797	-		Synpcc7942_1255	0.81	+0.7
1,278,797	-		Synpcc7942_1255	0.81	+0.3
1,278,812	-		Synpcc7942_1255	0.82	+0.2
1,278,812	-		Synpcc7942_1255	0.82	+1.0
1,278,820	+		Synpcc7942_1255	0.83	+0.5
1,278,825	+		Synpcc7942_1255	0.84	-2.1
1,278,833	-		Synpcc7942_1255	0.84	+0.3
1,278,833	-		Synpcc7942_1255	0.84	-0.7
1,278,842	+		Synpcc7942_1255	0.85	+1.1
1,278,843	+		Synpcc7942_1255	0.85	-0.1
1,278,959	-				+1.4
1,279,010	+				-1.8
1,279,016	-				+0.9
1,279,035	-				+1.3
1,279,040	-				-1.7
1,279,063	+				+0.7
1,279,090	+				-0.4
1,279,118	+				-1.7
1,279,124	+				+1.2
1,279,132	-				-0.7
1,279,192	-	gst	Synpcc7942_1256	0.20	-0.7
1,279,222	-	gst	Synpcc7942_1256	0.26	+0.9
1,279,251	-	gst	Synpcc7942_1256	0.31	-2.1
1,279,268	-	gst	Synpcc7942_1256	0.34	+1.7
1,279,320	+	gst	Synpcc7942_1256	0.43	-0.4
1,279,320	-	gst	Synpcc7942_1256	0.43	-1.1
1,279,330	-	gst	Synpcc7942_1256	0.45	-0.5
1,279,373	-	gst	Synpcc7942_1256	0.53	+0.6
1,279,377	+	gst	Synpcc7942_1256	0.54	+0.4
1,279,385	-	gst	Synpcc7942_1256	0.55	+1.3
1,279,385	-	gst	Synpcc7942_1256	0.55	-0.1
1,279,434	+	gst	Synpcc7942_1256	0.64	+1.3
1,279,437	+	gst	Synpcc7942_1256	0.65	+0.6
1,279,440	+	gst	Synpcc7942_1256	0.65	-1.9
1,279,442	+	gst	Synpcc7942_1256	0.65	+0.3
1,279,443	-	gst	Synpcc7942_1256	0.66	+0.2
1,279,443	-	gst	Synpcc7942_1256	0.66	+0.9
1,279,443	-	gst	Synpcc7942_1256	0.66	+1.5
1,279,443	-	gst	Synpcc7942_1256	0.66	-1.5
1,279,461	+	gst	Synpcc7942_1256	0.69	+0.5
1,279,461	+	gst	Synpcc7942_1256	0.69	+1.7
1,279,473	+	gst	Synpcc7942_1256	0.71	+3.0
1,279,479	+	gst	Synpcc7942_1256	0.72	-0.3
1,279,480	+	gst	Synpcc7942_1256	0.72	+1.9
1,279,485	+	gst	Synpcc7942_1256	0.73	-2.1
1,279,485	+	gst	Synpcc7942_1256	0.73	-2.7
1,279,524	-	gst	Synpcc7942_1256	0.80	-0.4
1,279,568	+	gst	Synpcc7942_1256	0.88	+0.2
1,279,568	+	gst	Synpcc7942_1256	0.88	+1.7
1,279,568	+	gst	Synpcc7942_1256	0.88	+1.9
1,279,573	+	gst	Synpcc7942_1256	0.89	+0.5
1,279,573	+	gst	Synpcc7942_1256	0.89	+0.3
1,279,573	-	gst	Synpcc7942_1256	0.89	+0.3
1,279,581	-				+0.9
1,279,581	-				+0.7
1,279,581	-				+0.1
1,279,587	+				+1.2
1,279,604	+				-2.1
1,279,634	+				+1.2
1,279,642	-				-2.5
1,279,642	-				-0.2
1,279,651	-				+1.2
1,279,678	-				-0.1
1,279,684	-				-0.7
1,279,735	+				-0.1
1,279,735	+				+1.7
1,279,762	+				-1.1
1,279,762	+				-0.2
1,279,762	+				+2.7
1,279,775	-				-0.7
1,279,782	-				+1.6
1,279,782	-				+0.2
1,279,782	-				+0.4
1,279,782	-				+1.7
1,279,787	-				-0.2
1,279,800	+				+1.6
1,279,812	+				-0.1
1,279,815	-				-0.1
1,279,844	+				-0.3
1,279,846	+				+1.0
1,279,846	-				+2.3
1,279,876	-		Synpcc7942_1257	0.10	-2.5
1,279,906	-		Synpcc7942_1257	0.12	+0.4
1,279,906	-		Synpcc7942_1257	0.12	+0.9
1,279,919	-		Synpcc7942_1257	0.13	+2.4
1,279,936	+		Synpcc7942_1257	0.14	-0.3
1,279,948	+		Synpcc7942_1257	0.14	-1.7
1,279,988	-		Synpcc7942_1257	0.16	+0.2
1,279,990	+		Synpcc7942_1257	0.17	+0.8
1,279,991	+		Synpcc7942_1257	0.17	-0.5
1,279,991	+		Synpcc7942_1257	0.17	+0.3
1,280,017	-		Synpcc7942_1257	0.18	-0.7
1,280,030	-		Synpcc7942_1257	0.19	-1.5
1,280,083	+		Synpcc7942_1257	0.22	+0.6
1,280,083	+		Synpcc7942_1257	0.22	-1.1
1,280,091	+		Synpcc7942_1257	0.22	+0.5
1,280,091	-		Synpcc7942_1257	0.22	-1.3
1,280,091	-		Synpcc7942_1257	0.22	+0.1
1,280,125	-		Synpcc7942_1257	0.24	+0.4
1,280,125	-		Synpcc7942_1257	0.24	+0.1
1,280,126	-		Synpcc7942_1257	0.24	-1.0
1,280,127	-		Synpcc7942_1257	0.24	-2.1
1,280,136	+		Synpcc7942_1257	0.24	+0.2
1,280,136	+		Synpcc7942_1257	0.24	+0.1
1,280,144	-		Synpcc7942_1257	0.25	+1.4
1,280,171	-		Synpcc7942_1257	0.26	-0.4
1,280,237	-		Synpcc7942_1257	0.30	+1.1
1,280,273	+		Synpcc7942_1257	0.32	+1.1
1,280,294	-		Synpcc7942_1257	0.33	-1.0
1,280,355	+		Synpcc7942_1257	0.36	-0.3
1,280,361	+		Synpcc7942_1257	0.37	+1.4
1,280,386	+		Synpcc7942_1257	0.38	-2.0
1,280,406	+		Synpcc7942_1257	0.39	-0.9
1,280,406	+		Synpcc7942_1257	0.39	+0.4
1,280,414	-		Synpcc7942_1257	0.39	+0.8
1,280,414	-		Synpcc7942_1257	0.39	-0.1
1,280,419	+		Synpcc7942_1257	0.40	+0.4
1,280,424	+		Synpcc7942_1257	0.40	-2.0
1,280,424	+		Synpcc7942_1257	0.40	+1.2
1,280,432	-		Synpcc7942_1257	0.40	+0.9
1,280,484	-		Synpcc7942_1257	0.43	-0.7
1,280,484	-		Synpcc7942_1257	0.43	+0.9
1,280,525	+		Synpcc7942_1257	0.45	+3.4
1,280,525	+		Synpcc7942_1257	0.45	-0.4
1,280,548	+		Synpcc7942_1257	0.47	-0.9
1,280,566	-		Synpcc7942_1257	0.48	-1.1
1,280,566	-		Synpcc7942_1257	0.48	+0.3
1,280,567	+		Synpcc7942_1257	0.48	-1.1
1,280,591	+		Synpcc7942_1257	0.49	-0.4
1,280,591	-		Synpcc7942_1257	0.49	-1.6
1,280,596	-		Synpcc7942_1257	0.49	+0.3