Experiment: Doxycycline hyclate 0.0015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ftsH and Synpcc7942_0298 are separated by 266 nucleotides Synpcc7942_0298 and mreC overlap by 4 nucleotides mreC and mreB are separated by 24 nucleotides
Synpcc7942_0297: ftsH - FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41, at 294,872 to 296,713
ftsH
Synpcc7942_0298: Synpcc7942_0298 - hypothetical protein, at 296,980 to 297,627
_0298
Synpcc7942_0299: mreC - rod shape-determining protein MreC, at 297,624 to 298,373
mreC
Synpcc7942_0300: mreB - rod shape-determining protein MreB, at 298,398 to 299,435
mreB
Position (kb) 297
298
299 Strain fitness (log2 ratio) -1
0
1
2 at 296.794 kb on + strand at 296.802 kb on - strand at 296.850 kb on + strand at 296.899 kb on + strand at 296.920 kb on - strand at 296.922 kb on + strand at 296.922 kb on + strand at 296.939 kb on - strand at 296.942 kb on - strand at 296.986 kb on - strand at 296.988 kb on - strand at 296.988 kb on - strand at 297.580 kb on + strand at 297.598 kb on - strand at 297.641 kb on - strand at 298.372 kb on + strand at 298.380 kb on + strand at 298.383 kb on - strand at 298.385 kb on + strand at 298.393 kb on - strand at 298.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Doxycycline hyclate 0.0015625 mg/ml remove 296,794 + -0.1 296,802 - -0.3 296,850 + +0.9 296,899 + +0.5 296,920 - +0.6 296,922 + -0.7 296,922 + +0.4 296,939 - +0.4 296,942 - +1.4 296,986 - -0.1 296,988 - -0.1 296,988 - -0.1 297,580 + +1.5 297,598 - +0.9 297,641 - +0.5 298,372 + +0.7 298,380 + +0.3 298,383 - -0.6 298,385 + +0.8 298,393 - +2.7 298,393 - +1.9
Or see this region's nucleotide sequence