Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0295
Experiment: Doxycycline hyclate 0.0015625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Doxycycline hyclate 0.0015625 mg/ml |
---|---|---|---|---|---|
remove | |||||
290,517 | + | psbO | Synpcc7942_0294 | 0.15 | -1.1 |
290,871 | - | psbO | Synpcc7942_0294 | 0.57 | -2.1 |
290,989 | - | psbO | Synpcc7942_0294 | 0.71 | -2.7 |
291,223 | - | -0.8 | |||
291,254 | - | -1.1 | |||
291,260 | + | -0.9 | |||
291,266 | + | -0.1 | |||
291,362 | - | +1.3 | |||
291,402 | + | +0.6 | |||
291,451 | - | +0.3 | |||
292,079 | + | sat | Synpcc7942_0295 | 0.56 | -1.7 |
292,089 | + | sat | Synpcc7942_0295 | 0.57 | -2.7 |
292,570 | - | -1.7 | |||
292,594 | + | -2.1 | |||
292,610 | + | -2.1 | |||
292,618 | - | +1.1 | |||
292,620 | - | -1.6 | |||
292,729 | + | +0.2 | |||
292,741 | + | -1.1 | |||
293,045 | + | Synpcc7942_0296 | 0.15 | -3.6 | |
293,157 | - | Synpcc7942_0296 | 0.20 | -3.1 | |
293,252 | + | Synpcc7942_0296 | 0.25 | -2.4 | |
293,271 | - | Synpcc7942_0296 | 0.26 | -1.0 | |
293,271 | - | Synpcc7942_0296 | 0.26 | -1.7 | |
293,354 | - | Synpcc7942_0296 | 0.30 | -2.7 | |
293,415 | + | Synpcc7942_0296 | 0.33 | -2.1 | |
293,423 | - | Synpcc7942_0296 | 0.33 | -0.1 |
Or see this region's nucleotide sequence