Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_0110

Experiment: Doxycycline hyclate 0.0015625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Doxycycline hyclate 0.0015625 mg/ml
108,408	+				-2.0
108,411	-				-1.0
108,411	-				-0.7
108,436	+				-1.5
108,436	+				-0.4
108,436	+				+1.3
108,441	+				-1.1
108,444	-				+0.9
108,444	-				-0.5
108,444	-				-2.7
108,444	-				+1.1
108,444	-				+1.3
108,444	-				-0.1
108,444	-				+1.3
108,449	-				+0.2
108,449	-				-0.6
108,452	+				+0.4
108,452	+				+0.3
108,460	-				-1.7
108,460	-				+1.1
108,462	-				+0.0
108,463	-				+2.9
108,463	-				-1.6
108,465	+				-3.6
108,473	-				-1.7
108,473	-				+0.9
108,473	-				-0.0
108,571	-				-2.0
108,571	-				-0.5
108,573	-				+0.4
108,578	-				+0.6
108,603	+		Synpcc7942_0108	0.18	-2.1
108,603	-		Synpcc7942_0108	0.18	-3.1
108,608	+		Synpcc7942_0108	0.20	+1.3
108,611	-		Synpcc7942_0108	0.21	-2.7
108,625	+		Synpcc7942_0108	0.26	-4.8
108,625	+		Synpcc7942_0108	0.26	-0.7
108,638	-		Synpcc7942_0108	0.31	+0.4
108,650	+		Synpcc7942_0108	0.36	-1.2
108,665	-		Synpcc7942_0108	0.42	-1.1
108,672	+		Synpcc7942_0108	0.44	-0.1
108,750	-		Synpcc7942_0108	0.74	+0.6
108,793	+				-1.4
108,793	+				-0.9
108,801	-				-1.7
108,801	-				-0.4
108,810	+				+0.1
108,829	+				-1.6
108,829	+				+0.6
108,837	-				+0.4
108,837	-				-0.1
108,837	-				+0.6
108,837	-				+1.2
108,842	+				-0.5
108,844	+				-1.6
108,860	-				-0.1
108,873	-				-2.8
108,933	+		Synpcc7942_0109	0.11	+0.0
108,953	+		Synpcc7942_0109	0.15	-0.7
108,978	+		Synpcc7942_0109	0.20	-1.1
108,983	+		Synpcc7942_0109	0.21	-0.1
108,987	+		Synpcc7942_0109	0.22	-2.4
108,989	+		Synpcc7942_0109	0.22	-0.3
108,989	-		Synpcc7942_0109	0.22	+0.9
108,995	-		Synpcc7942_0109	0.23	-2.3
108,997	-		Synpcc7942_0109	0.24	-0.8
109,044	+		Synpcc7942_0109	0.33	-2.5
109,045	-		Synpcc7942_0109	0.33	-1.7
109,050	-		Synpcc7942_0109	0.34	-1.7
109,052	-		Synpcc7942_0109	0.35	+0.5
109,059	-		Synpcc7942_0109	0.36	+2.7
109,089	+		Synpcc7942_0109	0.42	+0.4
109,152	-		Synpcc7942_0109	0.54	-0.4
109,158	-		Synpcc7942_0109	0.55	+0.3
109,227	-				-1.1
109,227	-		Synpcc7942_0109	0.69	-0.1
109,295	+		Synpcc7942_0109	0.82	-1.2
109,303	-		Synpcc7942_0109	0.84	-0.7
109,314	+		Synpcc7942_0109	0.86	+0.9
109,359	+				-3.7
109,362	+				-0.8
109,370	-				+1.4
109,418	-				+0.1
109,431	+				+2.0
109,436	-				+1.3
109,466	+		Synpcc7942_0110	0.14	+0.3
109,477	+		Synpcc7942_0110	0.16	+0.6
109,485	-		Synpcc7942_0110	0.17	-0.4
109,498	+		Synpcc7942_0110	0.19	-0.6
109,498	+		Synpcc7942_0110	0.19	+1.9
109,498	+		Synpcc7942_0110	0.19	-2.0
109,498	+		Synpcc7942_0110	0.19	+0.6
109,498	+		Synpcc7942_0110	0.19	-0.5
109,498	+		Synpcc7942_0110	0.19	+0.9
109,498	+		Synpcc7942_0110	0.19	+1.2
109,498	+		Synpcc7942_0110	0.19	+1.3
109,498	+		Synpcc7942_0110	0.19	+1.1
109,498	+		Synpcc7942_0110	0.19	+0.5
109,506	-		Synpcc7942_0110	0.21	+0.4
109,506	-		Synpcc7942_0110	0.21	-0.7
109,506	-		Synpcc7942_0110	0.21	-0.1
109,506	-		Synpcc7942_0110	0.21	+1.3
109,506	-		Synpcc7942_0110	0.21	+1.4
109,506	-		Synpcc7942_0110	0.21	+0.1
109,506	-		Synpcc7942_0110	0.21	-0.1
109,506	-		Synpcc7942_0110	0.21	-1.1
109,506	-		Synpcc7942_0110	0.21	+0.3
109,506	-		Synpcc7942_0110	0.21	+0.3
109,552	-		Synpcc7942_0110	0.29	-2.5
109,556	-		Synpcc7942_0110	0.30	-1.4
109,606	-		Synpcc7942_0110	0.39	+0.3
109,606	-		Synpcc7942_0110	0.39	+1.0
109,634	+		Synpcc7942_0110	0.44	-0.1
109,648	+		Synpcc7942_0110	0.46	+0.3
109,648	+		Synpcc7942_0110	0.46	-4.5
109,648	+		Synpcc7942_0110	0.46	+3.0
109,666	-		Synpcc7942_0110	0.49	-1.7
109,666	-		Synpcc7942_0110	0.49	+0.0
109,680	-		Synpcc7942_0110	0.52	+0.7
109,691	-		Synpcc7942_0110	0.54	+0.9
109,710	-		Synpcc7942_0110	0.57	+0.4
109,710	-		Synpcc7942_0110	0.57	-0.6
109,735	+		Synpcc7942_0110	0.62	-0.1
109,764	+		Synpcc7942_0110	0.67	+0.7
109,772	-		Synpcc7942_0110	0.68	-0.0
109,790	+				-1.1
109,791	-		Synpcc7942_0110	0.72	+0.9
109,810	+		Synpcc7942_0110	0.75	-0.7
109,812	-		Synpcc7942_0110	0.76	-0.4
109,817	+		Synpcc7942_0110	0.77	+0.1
109,817	+		Synpcc7942_0110	0.77	-0.4
109,825	-		Synpcc7942_0110	0.78	-0.3
109,854	+		Synpcc7942_0110	0.83	-0.1
109,856	-		Synpcc7942_0110	0.84	+0.3
109,857	-		Synpcc7942_0110	0.84	-0.6
109,867	-		Synpcc7942_0110	0.85	+0.0
109,910	+				+2.3
109,917	-				-0.0
109,931	-				+2.0
109,931	-				+1.6
109,936	+				-0.9
109,945	+				-0.3
109,963	+				+0.9
109,972	-				+0.9
110,038	+				-0.5
110,046	-				+1.3
110,046	-				+0.4
110,046	-				+1.2
110,048	-				-2.0
110,067	-				-0.1
110,067	-				+1.4
110,120	+				-0.1
110,127	+				+1.3
110,139	+				+0.9
110,189	+	dnaK	Synpcc7942_0111	0.11	+0.5
110,189	+	dnaK	Synpcc7942_0111	0.11	+2.7
110,190	+	dnaK	Synpcc7942_0111	0.11	+0.3
110,198	-	dnaK	Synpcc7942_0111	0.12	+0.0
110,206	-	dnaK	Synpcc7942_0111	0.12	+0.9
110,218	-	dnaK	Synpcc7942_0111	0.13	+0.3
110,235	-	dnaK	Synpcc7942_0111	0.14	-2.5
110,255	-	dnaK	Synpcc7942_0111	0.15	+1.8
110,312	+	dnaK	Synpcc7942_0111	0.19	+0.6
110,313	+	dnaK	Synpcc7942_0111	0.19	-0.1
110,321	-	dnaK	Synpcc7942_0111	0.19	+0.3
110,321	-	dnaK	Synpcc7942_0111	0.19	+0.7
110,321	-	dnaK	Synpcc7942_0111	0.19	+0.9
110,356	-	dnaK	Synpcc7942_0111	0.22	-0.4
110,366	-	dnaK	Synpcc7942_0111	0.22	+0.7
110,371	-	dnaK	Synpcc7942_0111	0.22	+0.4
110,415	+	dnaK	Synpcc7942_0111	0.25	+0.9
110,416	-	dnaK	Synpcc7942_0111	0.25	-0.2
110,423	-	dnaK	Synpcc7942_0111	0.26	-0.9
110,439	-	dnaK	Synpcc7942_0111	0.27	+1.3
110,450	+	dnaK	Synpcc7942_0111	0.27	-1.7
110,450	+	dnaK	Synpcc7942_0111	0.27	-0.7
110,450	+	dnaK	Synpcc7942_0111	0.27	-0.9
110,450	+	dnaK	Synpcc7942_0111	0.27	-1.5
110,450	+	dnaK	Synpcc7942_0111	0.27	-0.8
110,450	+	dnaK	Synpcc7942_0111	0.27	-1.7
110,455	+	dnaK	Synpcc7942_0111	0.28	-0.1
110,458	-	dnaK	Synpcc7942_0111	0.28	+1.6
110,458	-	dnaK	Synpcc7942_0111	0.28	-0.4
110,458	-	dnaK	Synpcc7942_0111	0.28	+1.7
110,458	-	dnaK	Synpcc7942_0111	0.28	+0.3
110,461	-	dnaK	Synpcc7942_0111	0.28	+0.7
110,463	-	dnaK	Synpcc7942_0111	0.28	+0.7
110,504	+	dnaK	Synpcc7942_0111	0.31	-2.1
110,509	+	dnaK	Synpcc7942_0111	0.31	+0.1
110,509	+	dnaK	Synpcc7942_0111	0.31	+0.2
110,517	-	dnaK	Synpcc7942_0111	0.32	+0.4
110,517	-	dnaK	Synpcc7942_0111	0.32	+1.1
110,527	-	dnaK	Synpcc7942_0111	0.32	+0.0
110,540	-	dnaK	Synpcc7942_0111	0.33	+0.4
110,594	-	dnaK	Synpcc7942_0111	0.36	+1.8
110,599	-	dnaK	Synpcc7942_0111	0.37	+0.7
110,618	+	dnaK	Synpcc7942_0111	0.38	+0.8
110,698	+	dnaK	Synpcc7942_0111	0.43	-1.1
110,698	+	dnaK	Synpcc7942_0111	0.43	-2.1
110,747	+	dnaK	Synpcc7942_0111	0.46	-3.3
110,775	-	dnaK	Synpcc7942_0111	0.48	-1.7
110,785	-	dnaK	Synpcc7942_0111	0.48	-0.5
110,789	+	dnaK	Synpcc7942_0111	0.49	+0.9
110,802	+	dnaK	Synpcc7942_0111	0.49	-0.6
110,822	-	dnaK	Synpcc7942_0111	0.51	-2.1
110,832	-	dnaK	Synpcc7942_0111	0.51	+0.7
110,843	-	dnaK	Synpcc7942_0111	0.52	+0.1
110,843	-	dnaK	Synpcc7942_0111	0.52	-0.6
110,843	-	dnaK	Synpcc7942_0111	0.52	-0.4
110,843	-	dnaK	Synpcc7942_0111	0.52	+0.6
110,846	+	dnaK	Synpcc7942_0111	0.52	-0.0
110,873	+	dnaK	Synpcc7942_0111	0.54	-0.7
110,880	+	dnaK	Synpcc7942_0111	0.54	+1.4
110,888	-	dnaK	Synpcc7942_0111	0.55	+1.0
110,888	-	dnaK	Synpcc7942_0111	0.55	-1.3