Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_5316 and Pf1N1B4_5317 overlap by 4 nucleotides Pf1N1B4_5317 and Pf1N1B4_5318 are separated by 662 nucleotides
Pf1N1B4_5316 - hypothetical protein, at 66,884 to 67,099
_5316
Pf1N1B4_5317 - hypothetical protein, at 67,096 to 67,596
_5317
Pf1N1B4_5318 - hypothetical protein, at 68,259 to 68,429
_5318
Position (kb) 67
68 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 66.098 kb on + strand at 66.099 kb on - strand at 66.109 kb on + strand at 66.109 kb on + strand at 66.109 kb on + strand at 66.110 kb on - strand at 66.110 kb on - strand at 66.132 kb on + strand at 66.132 kb on + strand at 66.132 kb on + strand at 66.132 kb on + strand at 66.133 kb on - strand at 66.133 kb on - strand at 66.133 kb on - strand at 66.133 kb on - strand at 66.222 kb on + strand at 66.222 kb on + strand at 66.222 kb on + strand at 66.484 kb on - strand at 66.484 kb on - strand at 66.502 kb on + strand at 66.502 kb on + strand at 66.502 kb on + strand at 66.502 kb on + strand at 66.502 kb on + strand at 66.584 kb on + strand at 66.584 kb on + strand at 66.585 kb on - strand at 66.648 kb on - strand at 66.740 kb on + strand at 66.740 kb on + strand at 66.740 kb on + strand at 66.741 kb on - strand at 66.741 kb on - strand at 66.741 kb on - strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.795 kb on + strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.796 kb on - strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.799 kb on + strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.800 kb on - strand at 66.849 kb on - strand at 66.929 kb on + strand, within Pf1N1B4_5316 at 66.929 kb on + strand, within Pf1N1B4_5316 at 66.983 kb on + strand, within Pf1N1B4_5316 at 67.043 kb on + strand, within Pf1N1B4_5316 at 67.043 kb on + strand, within Pf1N1B4_5316 at 67.044 kb on - strand, within Pf1N1B4_5316 at 67.129 kb on + strand at 67.189 kb on + strand, within Pf1N1B4_5317 at 67.189 kb on + strand, within Pf1N1B4_5317 at 67.190 kb on - strand, within Pf1N1B4_5317 at 67.190 kb on - strand, within Pf1N1B4_5317 at 67.206 kb on + strand, within Pf1N1B4_5317 at 67.206 kb on + strand, within Pf1N1B4_5317 at 67.435 kb on + strand, within Pf1N1B4_5317 at 67.435 kb on + strand, within Pf1N1B4_5317 at 67.435 kb on + strand, within Pf1N1B4_5317 at 67.435 kb on + strand, within Pf1N1B4_5317 at 67.435 kb on + strand, within Pf1N1B4_5317 at 67.436 kb on - strand, within Pf1N1B4_5317 at 67.436 kb on - strand, within Pf1N1B4_5317 at 67.436 kb on - strand, within Pf1N1B4_5317 at 67.436 kb on - strand, within Pf1N1B4_5317 at 67.545 kb on + strand, within Pf1N1B4_5317 at 67.545 kb on + strand at 67.644 kb on + strand at 67.644 kb on + strand at 67.644 kb on + strand at 67.645 kb on - strand at 67.645 kb on - strand at 67.645 kb on - strand at 67.717 kb on + strand at 67.718 kb on - strand at 67.893 kb on - strand at 67.893 kb on - strand at 67.918 kb on + strand at 67.918 kb on + strand at 67.918 kb on + strand at 67.918 kb on + strand at 67.919 kb on - strand at 67.919 kb on - strand at 67.919 kb on - strand at 68.083 kb on + strand at 68.083 kb on + strand at 68.083 kb on + strand at 68.084 kb on - strand at 68.084 kb on - strand at 68.089 kb on + strand at 68.089 kb on + strand at 68.090 kb on - strand at 68.090 kb on - strand at 68.090 kb on - strand at 68.090 kb on - strand at 68.104 kb on + strand at 68.105 kb on - strand at 68.105 kb on - strand at 68.105 kb on - strand at 68.105 kb on - strand at 68.105 kb on - strand at 68.136 kb on - strand at 68.136 kb on - strand at 68.136 kb on - strand at 68.136 kb on - strand at 68.136 kb on - strand at 68.150 kb on - strand at 68.170 kb on - strand at 68.240 kb on + strand at 68.241 kb on - strand at 68.259 kb on - strand at 68.398 kb on - strand, within Pf1N1B4_5318 at 68.533 kb on + strand at 68.534 kb on - strand at 68.534 kb on - strand at 68.542 kb on + strand at 68.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 66,098 + -1.6 66,099 - +1.0 66,109 + +0.4 66,109 + -1.8 66,109 + +2.8 66,110 - -0.7 66,110 - +0.0 66,132 + -1.8 66,132 + +1.0 66,132 + +0.6 66,132 + -1.0 66,133 - +0.3 66,133 - -0.6 66,133 - +0.0 66,133 - -1.0 66,222 + +1.6 66,222 + +0.6 66,222 + +0.6 66,484 - +0.0 66,484 - -1.3 66,502 + -0.1 66,502 + +1.2 66,502 + +0.2 66,502 + -0.5 66,502 + -1.0 66,584 + +0.4 66,584 + +0.9 66,585 - +2.0 66,648 - +0.0 66,740 + +1.0 66,740 + -0.4 66,740 + +0.4 66,741 - +1.0 66,741 - +0.0 66,741 - +0.0 66,795 + -1.0 66,795 + +0.0 66,795 + +0.0 66,795 + -1.0 66,795 + -0.2 66,795 + +0.0 66,795 + +0.0 66,795 + +0.0 66,795 + -0.6 66,796 - +0.5 66,796 - -1.6 66,796 - +1.0 66,796 - +0.0 66,796 - +0.0 66,799 + -1.0 66,799 + +0.6 66,799 + -0.2 66,799 + +1.0 66,799 + +0.6 66,799 + -0.3 66,799 + -0.2 66,799 + +0.0 66,799 + +0.0 66,799 + -1.0 66,799 + -1.6 66,799 + +0.2 66,799 + +0.6 66,800 - +1.0 66,800 - +0.0 66,800 - -0.5 66,800 - -1.6 66,800 - -3.0 66,800 - -2.0 66,800 - +3.2 66,800 - -0.2 66,800 - -0.4 66,800 - +0.8 66,800 - -0.6 66,800 - -0.6 66,800 - -0.4 66,800 - +0.0 66,800 - +0.9 66,800 - +1.9 66,849 - +0.6 66,929 + Pf1N1B4_5316 0.21 -1.6 66,929 + Pf1N1B4_5316 0.21 +0.0 66,983 + Pf1N1B4_5316 0.46 -1.6 67,043 + Pf1N1B4_5316 0.74 -2.0 67,043 + Pf1N1B4_5316 0.74 +1.6 67,044 - Pf1N1B4_5316 0.74 +0.6 67,129 + +0.0 67,189 + Pf1N1B4_5317 0.19 -1.0 67,189 + Pf1N1B4_5317 0.19 -1.3 67,190 - Pf1N1B4_5317 0.19 +1.0 67,190 - Pf1N1B4_5317 0.19 +1.3 67,206 + Pf1N1B4_5317 0.22 -1.3 67,206 + Pf1N1B4_5317 0.22 -0.7 67,435 + Pf1N1B4_5317 0.68 +0.5 67,435 + Pf1N1B4_5317 0.68 -1.6 67,435 + Pf1N1B4_5317 0.68 -1.0 67,435 + Pf1N1B4_5317 0.68 -1.7 67,435 + Pf1N1B4_5317 0.68 +0.0 67,436 - Pf1N1B4_5317 0.68 +1.6 67,436 - Pf1N1B4_5317 0.68 +1.0 67,436 - Pf1N1B4_5317 0.68 -1.4 67,436 - Pf1N1B4_5317 0.68 +0.0 67,545 + Pf1N1B4_5317 0.90 -1.0 67,545 + -1.0 67,644 + -1.3 67,644 + -1.3 67,644 + -1.3 67,645 - -2.0 67,645 - +0.0 67,645 - -0.7 67,717 + +0.0 67,718 - +1.0 67,893 - -1.0 67,893 - -1.0 67,918 + +0.7 67,918 + +0.6 67,918 + +0.0 67,918 + -1.6 67,919 - +1.6 67,919 - -1.6 67,919 - -0.2 68,083 + -0.9 68,083 + +0.6 68,083 + -2.0 68,084 - +0.6 68,084 - +1.6 68,089 + +0.8 68,089 + +0.0 68,090 - -1.3 68,090 - +0.0 68,090 - +0.4 68,090 - +1.0 68,104 + -1.0 68,105 - +0.0 68,105 - +1.2 68,105 - -0.7 68,105 - +0.0 68,105 - -0.9 68,136 - -0.3 68,136 - +1.2 68,136 - +1.4 68,136 - -2.0 68,136 - -0.3 68,150 - +1.6 68,170 - +0.4 68,240 + +1.0 68,241 - +1.2 68,259 - -1.0 68,398 - Pf1N1B4_5318 0.81 -1.0 68,533 + +0.0 68,534 - -0.7 68,534 - -0.3 68,542 + +0.0 68,543 - +1.0
Or see this region's nucleotide sequence