Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05946 and H281DRAFT_05947 overlap by 4 nucleotides H281DRAFT_05947 and H281DRAFT_05948 overlap by 4 nucleotides H281DRAFT_05948 and H281DRAFT_05949 are separated by 29 nucleotides
H281DRAFT_05946: H281DRAFT_05946 - monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-), at 85,846 to 87,330
_05946
H281DRAFT_05947: H281DRAFT_05947 - monosaccharide ABC transporter membrane protein, CUT2 family, at 87,327 to 88,262
_05947
H281DRAFT_05948: H281DRAFT_05948 - monosaccharide ABC transporter membrane protein, CUT2 family, at 88,259 to 89,230
_05948
H281DRAFT_05949: H281DRAFT_05949 - gluconolactonase, at 89,260 to 90,168
_05949
Position (kb) 87
88
89 Strain fitness (log2 ratio) -1
0
1 at 86.481 kb on + strand, within H281DRAFT_05946 at 86.482 kb on - strand at 86.673 kb on - strand, within H281DRAFT_05946 at 86.782 kb on + strand, within H281DRAFT_05946 at 86.783 kb on - strand, within H281DRAFT_05946 at 86.783 kb on - strand at 87.142 kb on + strand, within H281DRAFT_05946 at 87.142 kb on + strand, within H281DRAFT_05946 at 87.143 kb on - strand, within H281DRAFT_05946 at 87.143 kb on - strand, within H281DRAFT_05946 at 87.233 kb on - strand at 87.402 kb on - strand at 87.432 kb on + strand, within H281DRAFT_05947 at 87.432 kb on + strand, within H281DRAFT_05947 at 87.630 kb on + strand, within H281DRAFT_05947 at 87.630 kb on + strand, within H281DRAFT_05947 at 87.780 kb on + strand, within H281DRAFT_05947 at 88.039 kb on - strand, within H281DRAFT_05947 at 88.229 kb on - strand at 88.779 kb on - strand, within H281DRAFT_05948 at 89.172 kb on + strand at 89.173 kb on - strand at 89.175 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 86,481 + H281DRAFT_05946 0.43 +0.0 86,482 - +1.2 86,673 - H281DRAFT_05946 0.56 +1.1 86,782 + H281DRAFT_05946 0.63 -0.6 86,783 - H281DRAFT_05946 0.63 +0.6 86,783 - +0.5 87,142 + H281DRAFT_05946 0.87 +0.3 87,142 + H281DRAFT_05946 0.87 -0.3 87,143 - H281DRAFT_05946 0.87 +0.8 87,143 - H281DRAFT_05946 0.87 +0.1 87,233 - -0.3 87,402 - +1.1 87,432 + H281DRAFT_05947 0.11 -0.5 87,432 + H281DRAFT_05947 0.11 -0.3 87,630 + H281DRAFT_05947 0.32 -0.8 87,630 + H281DRAFT_05947 0.32 -0.5 87,780 + H281DRAFT_05947 0.48 -0.2 88,039 - H281DRAFT_05947 0.76 -0.1 88,229 - -0.7 88,779 - H281DRAFT_05948 0.53 -1.1 89,172 + -0.7 89,173 - -1.5 89,175 - +0.6
Or see this region's nucleotide sequence