Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05752 and H281DRAFT_05753 overlap by 4 nucleotides H281DRAFT_05753 and H281DRAFT_05754 are separated by 200 nucleotides
H281DRAFT_05752: H281DRAFT_05752 - flagellar biosynthetic protein FlhB, at 25,085 to 26,290
_05752
H281DRAFT_05753: H281DRAFT_05753 - flagellar biosynthesis protein FlhA, at 26,287 to 28,389
_05753
H281DRAFT_05754: H281DRAFT_05754 - flagellar biosynthesis protein FlhF, at 28,590 to 30,743
_05754
Position (kb) 26
27
28
29 Strain fitness (log2 ratio) -1
0
1
2 at 25.715 kb on + strand, within H281DRAFT_05752 at 25.723 kb on - strand, within H281DRAFT_05752 at 25.723 kb on - strand, within H281DRAFT_05752 at 25.723 kb on - strand, within H281DRAFT_05752 at 25.748 kb on - strand, within H281DRAFT_05752 at 25.803 kb on + strand, within H281DRAFT_05752 at 25.804 kb on - strand, within H281DRAFT_05752 at 25.804 kb on - strand, within H281DRAFT_05752 at 25.804 kb on - strand, within H281DRAFT_05752 at 25.919 kb on + strand, within H281DRAFT_05752 at 25.919 kb on + strand, within H281DRAFT_05752 at 25.920 kb on - strand, within H281DRAFT_05752 at 26.052 kb on - strand, within H281DRAFT_05752 at 26.052 kb on - strand, within H281DRAFT_05752 at 26.052 kb on - strand, within H281DRAFT_05752 at 26.126 kb on + strand at 26.127 kb on - strand, within H281DRAFT_05752 at 26.217 kb on + strand at 26.345 kb on + strand at 26.479 kb on + strand at 26.480 kb on - strand at 26.755 kb on - strand, within H281DRAFT_05753 at 26.836 kb on - strand, within H281DRAFT_05753 at 26.872 kb on + strand, within H281DRAFT_05753 at 26.872 kb on + strand, within H281DRAFT_05753 at 26.872 kb on + strand, within H281DRAFT_05753 at 27.013 kb on + strand, within H281DRAFT_05753 at 27.312 kb on - strand, within H281DRAFT_05753 at 27.312 kb on - strand, within H281DRAFT_05753 at 27.389 kb on + strand, within H281DRAFT_05753 at 27.730 kb on + strand, within H281DRAFT_05753 at 27.731 kb on - strand, within H281DRAFT_05753 at 28.185 kb on + strand at 28.186 kb on - strand at 28.365 kb on + strand at 28.366 kb on - strand at 28.460 kb on - strand at 28.460 kb on - strand at 28.522 kb on + strand at 28.523 kb on - strand at 28.523 kb on - strand at 28.587 kb on + strand at 28.587 kb on + strand at 28.632 kb on + strand at 28.642 kb on + strand at 28.643 kb on - strand at 28.685 kb on + strand at 28.730 kb on + strand at 28.730 kb on + strand at 28.732 kb on + strand at 28.733 kb on - strand at 28.733 kb on - strand at 28.778 kb on + strand at 28.779 kb on - strand at 28.779 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 25,715 + H281DRAFT_05752 0.52 +1.2 25,723 - H281DRAFT_05752 0.53 +1.7 25,723 - H281DRAFT_05752 0.53 +0.4 25,723 - H281DRAFT_05752 0.53 +2.2 25,748 - H281DRAFT_05752 0.55 -0.8 25,803 + H281DRAFT_05752 0.60 +0.2 25,804 - H281DRAFT_05752 0.60 +0.8 25,804 - H281DRAFT_05752 0.60 -0.4 25,804 - H281DRAFT_05752 0.60 +0.6 25,919 + H281DRAFT_05752 0.69 -0.4 25,919 + H281DRAFT_05752 0.69 +0.4 25,920 - H281DRAFT_05752 0.69 +0.9 26,052 - H281DRAFT_05752 0.80 +0.2 26,052 - H281DRAFT_05752 0.80 +1.0 26,052 - H281DRAFT_05752 0.80 +1.1 26,126 + +1.3 26,127 - H281DRAFT_05752 0.86 +0.0 26,217 + -0.3 26,345 + +0.9 26,479 + +0.9 26,480 - +0.6 26,755 - H281DRAFT_05753 0.22 +2.0 26,836 - H281DRAFT_05753 0.26 +1.4 26,872 + H281DRAFT_05753 0.28 +0.8 26,872 + H281DRAFT_05753 0.28 +1.3 26,872 + H281DRAFT_05753 0.28 +0.8 27,013 + H281DRAFT_05753 0.35 +0.7 27,312 - H281DRAFT_05753 0.49 +0.8 27,312 - H281DRAFT_05753 0.49 +0.7 27,389 + H281DRAFT_05753 0.52 +1.0 27,730 + H281DRAFT_05753 0.69 +0.6 27,731 - H281DRAFT_05753 0.69 -1.2 28,185 + +1.0 28,186 - +1.2 28,365 + +1.4 28,366 - -0.4 28,460 - -0.2 28,460 - -0.0 28,522 + -0.3 28,523 - +0.6 28,523 - +1.1 28,587 + +0.6 28,587 + -0.0 28,632 + -0.1 28,642 + +0.4 28,643 - +0.6 28,685 + +0.6 28,730 + -0.5 28,730 + +0.3 28,732 + -1.4 28,733 - +1.0 28,733 - +1.0 28,778 + +1.6 28,779 - +1.3 28,779 - +0.7
Or see this region's nucleotide sequence