Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05545

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05544 and H281DRAFT_05545 are separated by 7 nucleotidesH281DRAFT_05545 and H281DRAFT_05546 are separated by 312 nucleotides H281DRAFT_05544: H281DRAFT_05544 - NitT/TauT family transport system permease protein, at 131,900 to 132,775 _05544 H281DRAFT_05545: H281DRAFT_05545 - NitT/TauT family transport system ATP-binding protein, at 132,783 to 133,379 _05545 H281DRAFT_05546: H281DRAFT_05546 - NitT/TauT family transport system substrate-binding protein, at 133,692 to 134,699 _05546 Position (kb) 132 133 134Strain fitness (log2 ratio) -2 -1 0 1at 131.988 kb on - strand, within H281DRAFT_05544at 132.550 kb on - strand, within H281DRAFT_05544at 132.776 kb on - strandat 132.776 kb on - strandat 132.776 kb on - strandat 132.922 kb on + strand, within H281DRAFT_05545at 133.464 kb on + strandat 133.464 kb on + strandat 133.465 kb on - strandat 133.554 kb on + strandat 133.607 kb on + strandat 133.607 kb on + strandat 133.607 kb on + strandat 133.625 kb on + strandat 133.630 kb on + strandat 133.633 kb on + strandat 133.673 kb on + strandat 134.245 kb on + strand, within H281DRAFT_05546at 134.246 kb on - strand, within H281DRAFT_05546

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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131,988 - H281DRAFT_05544 0.10 -1.1
132,550 - H281DRAFT_05544 0.74 -0.4
132,776 - +0.2
132,776 - +0.7
132,776 - -0.1
132,922 + H281DRAFT_05545 0.23 +0.6
133,464 + +0.2
133,464 + +0.6
133,465 - -1.5
133,554 + +0.4
133,607 + +0.6
133,607 + -1.2
133,607 + +0.3
133,625 + +0.8
133,630 + -0.4
133,633 + +0.9
133,673 + -2.7
134,245 + H281DRAFT_05546 0.55 -0.5
134,246 - H281DRAFT_05546 0.55 +1.5

Or see this region's nucleotide sequence