Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05370 and H281DRAFT_05371 are separated by 95 nucleotides H281DRAFT_05371 and H281DRAFT_05372 are separated by 4 nucleotides H281DRAFT_05372 and H281DRAFT_05373 overlap by 4 nucleotides
H281DRAFT_05370: H281DRAFT_05370 - type VI secretion system protein ImpA, at 125,311 to 126,429
_05370
H281DRAFT_05371: H281DRAFT_05371 - OmpA-OmpF porin, OOP family, at 126,525 to 127,490
_05371
H281DRAFT_05372: H281DRAFT_05372 - type VI secretion system protein ImpM, at 127,495 to 128,487
_05372
H281DRAFT_05373: H281DRAFT_05373 - type VI secretion system protein ImpL, at 128,484 to 132,353
_05373
Position (kb) 126
127
128 Strain fitness (log2 ratio) -2
-1
0
1 at 125.567 kb on + strand, within H281DRAFT_05370 at 125.601 kb on + strand, within H281DRAFT_05370 at 125.602 kb on - strand, within H281DRAFT_05370 at 125.739 kb on + strand, within H281DRAFT_05370 at 125.740 kb on - strand, within H281DRAFT_05370 at 125.761 kb on + strand, within H281DRAFT_05370 at 125.762 kb on - strand, within H281DRAFT_05370 at 126.019 kb on + strand, within H281DRAFT_05370 at 126.020 kb on - strand, within H281DRAFT_05370 at 126.273 kb on + strand, within H281DRAFT_05370 at 126.285 kb on + strand, within H281DRAFT_05370 at 126.915 kb on - strand, within H281DRAFT_05371 at 126.979 kb on - strand, within H281DRAFT_05371 at 126.991 kb on - strand, within H281DRAFT_05371 at 127.138 kb on + strand at 127.138 kb on + strand, within H281DRAFT_05371 at 127.138 kb on + strand, within H281DRAFT_05371 at 127.139 kb on - strand, within H281DRAFT_05371 at 127.458 kb on + strand at 127.496 kb on + strand at 127.497 kb on - strand at 127.641 kb on + strand, within H281DRAFT_05372 at 127.641 kb on + strand, within H281DRAFT_05372 at 127.641 kb on + strand, within H281DRAFT_05372 at 127.642 kb on - strand, within H281DRAFT_05372 at 127.642 kb on - strand, within H281DRAFT_05372 at 127.642 kb on - strand, within H281DRAFT_05372 at 127.653 kb on - strand, within H281DRAFT_05372 at 127.674 kb on + strand, within H281DRAFT_05372 at 127.823 kb on + strand, within H281DRAFT_05372 at 128.256 kb on + strand, within H281DRAFT_05372 at 128.256 kb on + strand, within H281DRAFT_05372 at 128.257 kb on - strand, within H281DRAFT_05372 at 128.324 kb on + strand, within H281DRAFT_05372
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 125,567 + H281DRAFT_05370 0.23 +1.0 125,601 + H281DRAFT_05370 0.26 -0.1 125,602 - H281DRAFT_05370 0.26 -0.4 125,739 + H281DRAFT_05370 0.38 +1.2 125,740 - H281DRAFT_05370 0.38 -1.9 125,761 + H281DRAFT_05370 0.40 +0.2 125,762 - H281DRAFT_05370 0.40 +0.2 126,019 + H281DRAFT_05370 0.63 -0.0 126,020 - H281DRAFT_05370 0.63 +0.7 126,273 + H281DRAFT_05370 0.86 +0.1 126,285 + H281DRAFT_05370 0.87 -1.2 126,915 - H281DRAFT_05371 0.40 +0.4 126,979 - H281DRAFT_05371 0.47 +0.3 126,991 - H281DRAFT_05371 0.48 +1.1 127,138 + +1.0 127,138 + H281DRAFT_05371 0.63 +1.1 127,138 + H281DRAFT_05371 0.63 +0.8 127,139 - H281DRAFT_05371 0.64 +0.8 127,458 + -1.0 127,496 + -0.1 127,497 - -1.6 127,641 + H281DRAFT_05372 0.15 +0.4 127,641 + H281DRAFT_05372 0.15 -1.4 127,641 + H281DRAFT_05372 0.15 +1.5 127,642 - H281DRAFT_05372 0.15 +0.4 127,642 - H281DRAFT_05372 0.15 +0.5 127,642 - H281DRAFT_05372 0.15 +0.7 127,653 - H281DRAFT_05372 0.16 +0.2 127,674 + H281DRAFT_05372 0.18 +1.0 127,823 + H281DRAFT_05372 0.33 +0.9 128,256 + H281DRAFT_05372 0.77 +1.5 128,256 + H281DRAFT_05372 0.77 +1.1 128,257 - H281DRAFT_05372 0.77 +1.1 128,324 + H281DRAFT_05372 0.83 +0.2
Or see this region's nucleotide sequence