Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_04858

Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_04856 and H281DRAFT_04857 are separated by 485 nucleotidesH281DRAFT_04857 and H281DRAFT_04858 are separated by 131 nucleotidesH281DRAFT_04858 and H281DRAFT_04859 are separated by 83 nucleotides H281DRAFT_04856: H281DRAFT_04856 - hypothetical protein, at 304,718 to 304,921 _04856 H281DRAFT_04857: H281DRAFT_04857 - hypothetical protein, at 305,407 to 305,691 _04857 H281DRAFT_04858: H281DRAFT_04858 - hypothetical protein, at 305,823 to 306,167 _04858 H281DRAFT_04859: H281DRAFT_04859 - transitional endoplasmic reticulum ATPase, at 306,251 to 308,179 _04859 Position (kb) 305 306 307Strain fitness (log2 ratio) -1 0 1at 305.222 kb on - strandat 305.394 kb on - strandat 305.658 kb on - strand, within H281DRAFT_04857at 305.690 kb on - strandat 305.829 kb on - strandat 306.080 kb on - strand, within H281DRAFT_04858at 306.142 kb on - strandat 306.142 kb on - strandat 306.142 kb on - strandat 306.369 kb on + strandat 306.369 kb on + strandat 306.372 kb on + strandat 306.372 kb on + strandat 306.373 kb on - strandat 306.373 kb on - strandat 306.526 kb on - strand, within H281DRAFT_04859at 306.610 kb on - strand, within H281DRAFT_04859at 306.625 kb on + strand, within H281DRAFT_04859at 306.653 kb on + strand, within H281DRAFT_04859at 306.654 kb on - strand, within H281DRAFT_04859at 306.736 kb on + strand, within H281DRAFT_04859at 306.736 kb on + strand, within H281DRAFT_04859at 306.737 kb on - strand, within H281DRAFT_04859at 306.737 kb on - strand, within H281DRAFT_04859at 306.737 kb on - strand, within H281DRAFT_04859at 306.981 kb on + strand, within H281DRAFT_04859at 307.004 kb on - strand, within H281DRAFT_04859at 307.004 kb on - strand, within H281DRAFT_04859at 307.004 kb on - strand, within H281DRAFT_04859

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C)
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305,222 - -0.1
305,394 - -0.4
305,658 - H281DRAFT_04857 0.88 +1.0
305,690 - +0.7
305,829 - +0.8
306,080 - H281DRAFT_04858 0.74 +0.8
306,142 - +0.1
306,142 - +0.3
306,142 - +0.1
306,369 + -0.4
306,369 + -1.0
306,372 + -0.4
306,372 + -0.5
306,373 - +0.5
306,373 - -0.3
306,526 - H281DRAFT_04859 0.14 +0.1
306,610 - H281DRAFT_04859 0.19 -0.2
306,625 + H281DRAFT_04859 0.19 +0.2
306,653 + H281DRAFT_04859 0.21 +0.4
306,654 - H281DRAFT_04859 0.21 -1.1
306,736 + H281DRAFT_04859 0.25 +0.4
306,736 + H281DRAFT_04859 0.25 +0.1
306,737 - H281DRAFT_04859 0.25 +0.2
306,737 - H281DRAFT_04859 0.25 +0.8
306,737 - H281DRAFT_04859 0.25 +0.6
306,981 + H281DRAFT_04859 0.38 +0.3
307,004 - H281DRAFT_04859 0.39 +0.3
307,004 - H281DRAFT_04859 0.39 -0.5
307,004 - H281DRAFT_04859 0.39 +0.3

Or see this region's nucleotide sequence