Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04316 and H281DRAFT_04317 are separated by 483 nucleotides H281DRAFT_04317 and H281DRAFT_04318 are separated by 323 nucleotides H281DRAFT_04318 and H281DRAFT_04319 are separated by 311 nucleotides
H281DRAFT_04316: H281DRAFT_04316 - bile acid:Na+ symporter, BASS family, at 33,840 to 34,799
_04316
H281DRAFT_04317: H281DRAFT_04317 - multidrug resistance protein, MATE family, at 35,283 to 36,695
_04317
H281DRAFT_04318: H281DRAFT_04318 - ribosome-associated protein, at 37,019 to 37,237
_04318
H281DRAFT_04319: H281DRAFT_04319 - hypothetical protein, at 37,549 to 38,013
_04319
Position (kb) 35
36
37 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 34.370 kb on - strand, within H281DRAFT_04316 at 34.379 kb on + strand, within H281DRAFT_04316 at 34.380 kb on - strand, within H281DRAFT_04316 at 34.380 kb on - strand, within H281DRAFT_04316 at 34.462 kb on + strand, within H281DRAFT_04316 at 34.463 kb on - strand, within H281DRAFT_04316 at 34.463 kb on - strand, within H281DRAFT_04316 at 34.585 kb on + strand, within H281DRAFT_04316 at 34.586 kb on - strand, within H281DRAFT_04316 at 34.739 kb on - strand at 34.817 kb on + strand at 34.817 kb on + strand at 34.817 kb on + strand at 34.825 kb on - strand at 34.825 kb on - strand at 34.826 kb on + strand at 34.941 kb on + strand at 34.942 kb on - strand at 35.123 kb on + strand at 35.337 kb on + strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.338 kb on - strand at 35.404 kb on - strand at 35.404 kb on - strand at 35.441 kb on + strand, within H281DRAFT_04317 at 35.441 kb on + strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.442 kb on - strand, within H281DRAFT_04317 at 35.496 kb on + strand, within H281DRAFT_04317 at 35.496 kb on + strand, within H281DRAFT_04317 at 35.497 kb on - strand, within H281DRAFT_04317 at 35.600 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317 at 35.638 kb on + strand, within H281DRAFT_04317 at 35.923 kb on + strand, within H281DRAFT_04317 at 35.924 kb on - strand, within H281DRAFT_04317 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.134 kb on - strand, within H281DRAFT_04317 at 36.397 kb on + strand, within H281DRAFT_04317 at 36.398 kb on - strand, within H281DRAFT_04317 at 36.398 kb on - strand, within H281DRAFT_04317 at 36.787 kb on - strand at 36.834 kb on + strand at 36.835 kb on - strand at 36.835 kb on - strand at 36.928 kb on + strand at 36.928 kb on + strand at 36.929 kb on - strand at 37.058 kb on + strand, within H281DRAFT_04318 at 37.058 kb on + strand, within H281DRAFT_04318 at 37.059 kb on - strand, within H281DRAFT_04318 at 37.203 kb on + strand, within H281DRAFT_04318 at 37.272 kb on + strand at 37.273 kb on - strand at 37.273 kb on - strand at 37.451 kb on + strand at 37.452 kb on - strand at 37.533 kb on + strand at 37.533 kb on + strand at 37.533 kb on + strand at 37.534 kb on - strand at 37.534 kb on - strand at 37.563 kb on + strand at 37.563 kb on + strand at 37.563 kb on + strand at 37.564 kb on - strand at 37.564 kb on - strand at 37.564 kb on - strand at 37.656 kb on + strand, within H281DRAFT_04319 at 37.657 kb on - strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.664 kb on + strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319 at 37.665 kb on - strand, within H281DRAFT_04319
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 34,370 - H281DRAFT_04316 0.55 -0.5 34,379 + H281DRAFT_04316 0.56 +0.8 34,380 - H281DRAFT_04316 0.56 -0.5 34,380 - H281DRAFT_04316 0.56 +1.6 34,462 + H281DRAFT_04316 0.65 +0.3 34,463 - H281DRAFT_04316 0.65 +0.3 34,463 - H281DRAFT_04316 0.65 -0.6 34,585 + H281DRAFT_04316 0.78 +0.4 34,586 - H281DRAFT_04316 0.78 +0.4 34,739 - +1.2 34,817 + -0.3 34,817 + -0.4 34,817 + +0.5 34,825 - -0.6 34,825 - -0.1 34,826 + +1.8 34,941 + -0.3 34,942 - -0.1 35,123 + -0.2 35,337 + +0.3 35,338 - +0.7 35,338 - -0.6 35,338 - +0.1 35,338 - -0.1 35,404 - -0.0 35,404 - -0.8 35,441 + H281DRAFT_04317 0.11 +0.3 35,441 + H281DRAFT_04317 0.11 -0.3 35,442 - H281DRAFT_04317 0.11 +0.8 35,442 - H281DRAFT_04317 0.11 +0.5 35,442 - H281DRAFT_04317 0.11 -0.3 35,442 - H281DRAFT_04317 0.11 -0.9 35,442 - H281DRAFT_04317 0.11 +0.5 35,496 + H281DRAFT_04317 0.15 +0.6 35,496 + H281DRAFT_04317 0.15 -0.6 35,497 - H281DRAFT_04317 0.15 +0.3 35,600 + H281DRAFT_04317 0.22 -0.6 35,638 + H281DRAFT_04317 0.25 -0.3 35,638 + H281DRAFT_04317 0.25 +0.0 35,638 + H281DRAFT_04317 0.25 -0.2 35,923 + H281DRAFT_04317 0.45 +0.3 35,924 - H281DRAFT_04317 0.45 -0.2 36,134 - H281DRAFT_04317 0.60 -0.3 36,134 - H281DRAFT_04317 0.60 -0.0 36,134 - H281DRAFT_04317 0.60 -0.1 36,397 + H281DRAFT_04317 0.79 +0.2 36,398 - H281DRAFT_04317 0.79 -0.1 36,398 - H281DRAFT_04317 0.79 +0.9 36,787 - -0.7 36,834 + -0.3 36,835 - -0.7 36,835 - -0.6 36,928 + -0.2 36,928 + -0.2 36,929 - -1.2 37,058 + H281DRAFT_04318 0.18 +0.0 37,058 + H281DRAFT_04318 0.18 +0.2 37,059 - H281DRAFT_04318 0.18 +1.2 37,203 + H281DRAFT_04318 0.84 +1.0 37,272 + -0.0 37,273 - +4.1 37,273 - -0.9 37,451 + +0.9 37,452 - +0.6 37,533 + -0.8 37,533 + +0.6 37,533 + +0.1 37,534 - -0.6 37,534 - +1.8 37,563 + +0.2 37,563 + +0.8 37,563 + +0.6 37,564 - +1.3 37,564 - -0.7 37,564 - -1.2 37,656 + H281DRAFT_04319 0.23 -0.3 37,657 - H281DRAFT_04319 0.23 +0.2 37,664 + H281DRAFT_04319 0.25 +0.3 37,664 + H281DRAFT_04319 0.25 -0.5 37,664 + H281DRAFT_04319 0.25 +0.2 37,665 - H281DRAFT_04319 0.25 -0.2 37,665 - H281DRAFT_04319 0.25 +0.8 37,665 - H281DRAFT_04319 0.25 -0.0 37,665 - H281DRAFT_04319 0.25 -0.6
Or see this region's nucleotide sequence