Experiment: 2-Deoxy-D-ribonic lithium salt 10 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04199 and H281DRAFT_04200 are separated by 53 nucleotides H281DRAFT_04200 and H281DRAFT_04201 are separated by 52 nucleotides H281DRAFT_04201 and H281DRAFT_04202 are separated by 99 nucleotides H281DRAFT_04202 and H281DRAFT_04203 are separated by 98 nucleotides
H281DRAFT_04199: H281DRAFT_04199 - Putative Zn-dependent protease, contains TPR repeats, at 317,782 to 319,650
_04199
H281DRAFT_04200: H281DRAFT_04200 - cyclic pyranopterin monophosphate synthase subunit MoaC, at 319,704 to 320,180
_04200
H281DRAFT_04201: H281DRAFT_04201 - O-antigen ligase, at 320,233 to 322,050
_04201
H281DRAFT_04202: H281DRAFT_04202 - type IV pilus assembly protein PilA, at 322,150 to 322,773
_04202
H281DRAFT_04203: H281DRAFT_04203 - integral membrane protein, YjbE family, at 322,872 to 323,582
_04203
Position (kb) 320
321
322
323 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 319.328 kb on + strand, within H281DRAFT_04199 at 319.380 kb on - strand, within H281DRAFT_04199 at 319.588 kb on + strand at 319.588 kb on + strand at 319.589 kb on - strand at 319.593 kb on + strand at 319.614 kb on + strand at 319.614 kb on + strand at 319.615 kb on - strand at 319.615 kb on - strand at 319.674 kb on + strand at 319.674 kb on + strand at 319.675 kb on - strand at 319.675 kb on - strand at 319.679 kb on + strand at 319.680 kb on - strand at 320.216 kb on + strand at 320.217 kb on - strand at 320.345 kb on + strand at 320.346 kb on - strand at 320.351 kb on + strand at 320.351 kb on + strand at 320.636 kb on + strand, within H281DRAFT_04201 at 320.805 kb on - strand, within H281DRAFT_04201 at 321.556 kb on + strand, within H281DRAFT_04201 at 321.936 kb on + strand at 321.936 kb on + strand at 321.936 kb on + strand at 321.937 kb on - strand at 321.937 kb on - strand at 321.937 kb on - strand at 321.937 kb on - strand at 322.052 kb on - strand at 322.054 kb on - strand at 322.152 kb on - strand at 322.152 kb on - strand at 322.152 kb on - strand at 322.191 kb on + strand at 322.192 kb on - strand at 322.192 kb on - strand at 322.351 kb on + strand, within H281DRAFT_04202 at 322.352 kb on - strand, within H281DRAFT_04202 at 322.599 kb on - strand, within H281DRAFT_04202 at 322.689 kb on + strand, within H281DRAFT_04202 at 322.755 kb on - strand at 322.918 kb on + strand at 323.021 kb on + strand, within H281DRAFT_04203 at 323.021 kb on + strand, within H281DRAFT_04203 at 323.021 kb on + strand, within H281DRAFT_04203 at 323.022 kb on - strand, within H281DRAFT_04203 at 323.022 kb on - strand, within H281DRAFT_04203
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Deoxy-D-ribonic lithium salt 10 mM (C) remove 319,328 + H281DRAFT_04199 0.83 +0.2 319,380 - H281DRAFT_04199 0.86 -0.5 319,588 + +0.5 319,588 + +0.0 319,589 - +0.2 319,593 + +0.8 319,614 + -0.1 319,614 + +0.3 319,615 - +0.0 319,615 - +0.1 319,674 + -1.1 319,674 + +2.8 319,675 - -0.4 319,675 - -0.3 319,679 + +0.8 319,680 - -0.2 320,216 + -0.2 320,217 - -0.2 320,345 + +0.8 320,346 - +0.4 320,351 + +0.4 320,351 + -0.6 320,636 + H281DRAFT_04201 0.22 +0.4 320,805 - H281DRAFT_04201 0.31 +0.9 321,556 + H281DRAFT_04201 0.73 +2.1 321,936 + -0.7 321,936 + +0.2 321,936 + -2.2 321,937 - -0.9 321,937 - +1.4 321,937 - -0.4 321,937 - +0.3 322,052 - -1.2 322,054 - +0.9 322,152 - +0.8 322,152 - -0.4 322,152 - +0.9 322,191 + -0.9 322,192 - -0.7 322,192 - +1.1 322,351 + H281DRAFT_04202 0.32 +0.3 322,352 - H281DRAFT_04202 0.32 +0.0 322,599 - H281DRAFT_04202 0.72 -1.3 322,689 + H281DRAFT_04202 0.86 -0.8 322,755 - +0.4 322,918 + -0.0 323,021 + H281DRAFT_04203 0.21 -0.4 323,021 + H281DRAFT_04203 0.21 -0.9 323,021 + H281DRAFT_04203 0.21 -0.2 323,022 - H281DRAFT_04203 0.21 +0.4 323,022 - H281DRAFT_04203 0.21 -0.7
Or see this region's nucleotide sequence